RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 NPEPPSP55786 919 aa5.06□□□□□ -1.6
NUP54-206ENST00000508465 SETQ01105 290 aaPredicted RBP5.06□□□□□ -1.6
NUP54-206ENST00000508465 PRKCEQ02156 737 aa5.06□□□□□ -1.6
NUP54-206ENST00000508465 MGAT3Q09327 533 aa5.06□□□□□ -1.6
NUP54-206ENST00000508465 DRP2Q13474 957 aa5.06□□□□□ -1.6
NUP54-206ENST00000508465 PTPAQ15257 358 aa5.06□□□□□ -1.6
NUP54-206ENST00000508465 RAB30Q15771 203 aa5.06□□□□□ -1.6
NUP54-206ENST00000508465 CALCRLQ16602 461 aa5.06□□□□□ -1.6
NUP54-206ENST00000508465 MTERF2Q49AM1 385 aa5.06□□□□□ -1.6
NUP54-206ENST00000508465 ZNF484Q5JVG2 852 aa5.06□□□□□ -1.6
NUP54-206ENST00000508465 FBXO47Q5MNV8 452 aa5.06□□□□□ -1.6
NUP54-206ENST00000508465 PLA2G4FQ68DD2 849 aa5.06□□□□□ -1.6
NUP54-206ENST00000508465 NCAPH2Q6IBW4 605 aa5.06□□□□□ -1.6
NUP54-206ENST00000508465 TAF2Q6P1X5 1199 aa5.06□□□□□ -1.6
NUP54-206ENST00000508465 NEK8Q86SG6 692 aa5.06□□□□□ -1.6
NUP54-206ENST00000508465 SMAP1Q8IYB5 467 aaPredicted RBP5.06□□□□□ -1.6
NUP54-206ENST00000508465 MYOCDQ8IZQ8 938 aa5.06□□□□□ -1.6
NUP54-206ENST00000508465 USP38Q8NB14 1042 aa5.06□□□□□ -1.6
NUP54-206ENST00000508465 FAM184AQ8NB25 1140 aa5.06□□□□□ -1.6
NUP54-206ENST00000508465 MAFAQ8NHW3 353 aaPredicted RBP5.06□□□□□ -1.6
NUP54-206ENST00000508465 PHOSPHO2Q8TCD6 241 aa5.06□□□□□ -1.6
NUP54-206ENST00000508465 ASB15Q8WXK1 588 aa5.06□□□□□ -1.6
NUP54-206ENST00000508465 TMX3Q96JJ7 454 aa5.06□□□□□ -1.6
NUP54-206ENST00000508465 FAM20AQ96MK3 541 aa5.06□□□□□ -1.6
NUP54-206ENST00000508465 RAD9AQ99638 391 aa5.06□□□□□ -1.6
NUP54-206ENST00000508465 IFIH1Q9BYX4 1025 aaKnown RBP5.06□□□□□ -1.6
NUP54-206ENST00000508465 CELF4Q9BZC1 486 aaKnown RBP5.06□□□□□ -1.6
NUP54-206ENST00000508465 TMEM60Q9H2L4 133 aa5.06□□□□□ -1.6
NUP54-206ENST00000508465 UPF2Q9HAU5 1272 aaKnown RBP5.06□□□□□ -1.6
NUP54-206ENST00000508465 WRAP73Q9P2S5 460 aaPredicted RBP5.06□□□□□ -1.6
NUP54-206ENST00000508465 SAE1Q9UBE0 346 aaPredicted RBP5.06□□□□□ -1.6
NUP54-206ENST00000508465 PADI3Q9ULW8 664 aa5.06□□□□□ -1.6
NUP54-206ENST00000508465 NOC2LQ9Y3T9 749 aaKnown RBP5.06□□□□□ -1.6
NUP54-206ENST00000508465 KAT6AQ92794 2004 aa5.06□□□□□ -1.6
NUP54-206ENST00000508465 MYO9BQ13459 2157 aa5.05□□□□□ -1.6
NUP54-206ENST00000508465 SMIM35A0A1B0GVV1 85 aa5.05□□□□□ -1.6
NUP54-206ENST00000508465 MGEA5O60502 916 aa5.05□□□□□ -1.6
NUP54-206ENST00000508465 FAM20BO75063 409 aa5.05□□□□□ -1.6
NUP54-206ENST00000508465 MFAP3LO75121 409 aa5.05□□□□□ -1.6
NUP54-206ENST00000508465 GPR32O75388 356 aa5.05□□□□□ -1.6
NUP54-206ENST00000508465 BAIAP3O94812 1187 aa5.05□□□□□ -1.6
NUP54-206ENST00000508465 GJB5O95377 273 aa5.05□□□□□ -1.6
NUP54-206ENST00000508465 BAG4O95429 457 aaKnown RBP5.05□□□□□ -1.6
NUP54-206ENST00000508465 PARNO95453 639 aaKnown RBP5.05□□□□□ -1.6
NUP54-206ENST00000508465 PROZP22891 400 aa5.05□□□□□ -1.6
NUP54-206ENST00000508465 SFNP31947 248 aa5.05□□□□□ -1.6
NUP54-206ENST00000508465 QARSP47897 775 aaKnown RBP5.05□□□□□ -1.6
NUP54-206ENST00000508465 GATMP50440 423 aa5.05□□□□□ -1.6
NUP54-206ENST00000508465 SLC26A2P50443 739 aa5.05□□□□□ -1.6
NUP54-206ENST00000508465 JAK3P52333 1124 aa5.05□□□□□ -1.6
NUP54-206ENST00000508465 NLRP11P59045 1033 aaKnown RBP5.05□□□□□ -1.6
NUP54-206ENST00000508465 SUMO1P63165 101 aaKnown RBP5.05□□□□□ -1.6
NUP54-206ENST00000508465 CYP4A11Q02928 519 aa5.05□□□□□ -1.6
NUP54-206ENST00000508465 CTTNQ14247 550 aaKnown RBP5.05□□□□□ -1.6
NUP54-206ENST00000508465 RABEP1Q15276 862 aa5.05□□□□□ -1.6
NUP54-206ENST00000508465 SAFBQ15424 915 aaKnown RBP eCLIP5.05□□□□□ -1.6
NUP54-206ENST00000508465 RABL3Q5HYI8 236 aa5.05□□□□□ -1.6
NUP54-206ENST00000508465 LY6G5CQ5SRR4 150 aa5.05□□□□□ -1.6
NUP54-206ENST00000508465 PPP4R3AQ6IN85 833 aa5.05□□□□□ -1.6
NUP54-206ENST00000508465 B3GNT9Q6UX72 402 aa5.05□□□□□ -1.6
NUP54-206ENST00000508465 ANO5Q75V66 913 aa5.05□□□□□ -1.6
NUP54-206ENST00000508465 GAREM2Q75VX8 874 aa5.05□□□□□ -1.6
NUP54-206ENST00000508465 RPAINQ86UA6 219 aa5.05□□□□□ -1.6
NUP54-206ENST00000508465 TPH2Q8IWU9 490 aa5.05□□□□□ -1.6
NUP54-206ENST00000508465 NME8Q8N427 588 aa5.05□□□□□ -1.6
NUP54-206ENST00000508465 ZNF276Q8N554 614 aa5.05□□□□□ -1.6
NUP54-206ENST00000508465 FBXO18Q8NFZ0 1043 aa5.05□□□□□ -1.6
NUP54-206ENST00000508465 GPR150Q8NGU9 434 aa5.05□□□□□ -1.6
NUP54-206ENST00000508465 TNPO1Q92973 898 aaKnown RBP5.05□□□□□ -1.6
NUP54-206ENST00000508465 TOP1MTQ969P6 601 aa5.05□□□□□ -1.6
NUP54-206ENST00000508465 DYDC2Q96IM9 177 aa5.05□□□□□ -1.6
NUP54-206ENST00000508465 RPL10LQ96L21 214 aaKnown RBP5.05□□□□□ -1.6
NUP54-206ENST00000508465 TCF25Q9BQ70 676 aa5.05□□□□□ -1.6
NUP54-206ENST00000508465 LLPHQ9BRT6 129 aaKnown RBP5.05□□□□□ -1.6
NUP54-206ENST00000508465 C17orf80Q9BSJ5 609 aa5.05□□□□□ -1.6
NUP54-206ENST00000508465 SPATA9Q9BWV2 254 aa5.05□□□□□ -1.6
NUP54-206ENST00000508465 TMX1Q9H3N1 280 aa5.05□□□□□ -1.6
NUP54-206ENST00000508465 TTC12Q9H892 705 aaPredicted RBP5.05□□□□□ -1.6
NUP54-206ENST00000508465 SMURF1Q9HCE7 757 aa5.05□□□□□ -1.6
NUP54-206ENST00000508465 POLD4Q9HCU8 107 aa5.05□□□□□ -1.6
NUP54-206ENST00000508465 KCNMB3Q9NPA1 279 aa5.05□□□□□ -1.6
NUP54-206ENST00000508465 PCDHA12Q9UN75 941 aa5.05□□□□□ -1.6
NUP54-206ENST00000508465 ST3GAL5Q9UNP4 418 aa5.05□□□□□ -1.6
NUP54-206ENST00000508465 TRPV2Q9Y5S1 764 aa5.05□□□□□ -1.6
NUP54-206ENST00000508465 TRBV23-1A0A0A0MS06 115 aa5.04□□□□□ -1.6
NUP54-206ENST00000508465 LINC01553A4QN01 128 aa5.04□□□□□ -1.6
NUP54-206ENST00000508465 GOLGA6L22H0YM25 854 aa5.04□□□□□ -1.6
NUP54-206ENST00000508465 M0QZ92 97 aa5.04□□□□□ -1.6
NUP54-206ENST00000508465 MAGEB2O15479 319 aa5.04□□□□□ -1.6
NUP54-206ENST00000508465 NEMFO60524 1076 aa5.04□□□□□ -1.6
NUP54-206ENST00000508465 CAND2O75155 1236 aa5.04□□□□□ -1.6
NUP54-206ENST00000508465 RPS6KA5O75582 802 aa5.04□□□□□ -1.6
NUP54-206ENST00000508465 SLITRK3O94933 977 aa5.04□□□□□ -1.6
NUP54-206ENST00000508465 CSPG5O95196 566 aa5.04□□□□□ -1.6
NUP54-206ENST00000508465 GCFC2P16383 781 aaKnown RBP5.04□□□□□ -1.6
NUP54-206ENST00000508465 GJB2P29033 226 aa5.04□□□□□ -1.6
NUP54-206ENST00000508465 TECP42680 631 aa5.04□□□□□ -1.6
NUP54-206ENST00000508465 TOB1P50616 345 aaPredicted RBP5.04□□□□□ -1.6
NUP54-206ENST00000508465 CRYBB1P53674 252 aaPredicted RBP5.04□□□□□ -1.6
NUP54-206ENST00000508465 BPIFB4P59827 614 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms