RNA–Protein interactions for RNA: ENST00000508238.5

UBE2D3-222, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-222ENST00000508238 FILIP1Q7Z7B0 1213 aa8.4□□□□□ -1.06
UBE2D3-222ENST00000508238 WDR5BQ86VZ2 330 aa8.4□□□□□ -1.06
UBE2D3-222ENST00000508238 DCLK2Q8N568 766 aa8.4□□□□□ -1.06
UBE2D3-222ENST00000508238 EZH1Q92800 747 aaPredicted RBP8.4□□□□□ -1.06
UBE2D3-222ENST00000508238 SEMA4DQ92854 862 aa8.4□□□□□ -1.06
UBE2D3-222ENST00000508238 CD101Q93033 1021 aa8.4□□□□□ -1.06
UBE2D3-222ENST00000508238 SMARCE1Q969G3 411 aa8.4□□□□□ -1.06
UBE2D3-222ENST00000508238 CYFIP2Q96F07 1278 aa8.4□□□□□ -1.06
UBE2D3-222ENST00000508238 EEF2KMTQ96G04 330 aa8.4□□□□□ -1.06
UBE2D3-222ENST00000508238 DHTKD1Q96HY7 919 aaPredicted RBP8.4□□□□□ -1.06
UBE2D3-222ENST00000508238 TWNKQ96RR1 684 aa8.4□□□□□ -1.06
UBE2D3-222ENST00000508238 TSG101Q99816 390 aa8.4□□□□□ -1.06
UBE2D3-222ENST00000508238 GRIP2Q9C0E4 1043 aa8.4□□□□□ -1.06
UBE2D3-222ENST00000508238 TSPAN10Q9H1Z9 355 aaPredicted RBP8.4□□□□□ -1.06
UBE2D3-222ENST00000508238 ATP13A2Q9NQ11 1180 aa8.4□□□□□ -1.06
UBE2D3-222ENST00000508238 RAB20Q9NX57 234 aa8.4□□□□□ -1.06
UBE2D3-222ENST00000508238 SCHIP1Q9P0W5 487 aaPredicted RBP8.4□□□□□ -1.06
UBE2D3-222ENST00000508238 CFAP97Q9P2B7 532 aa8.4□□□□□ -1.06
UBE2D3-222ENST00000508238 SCML2Q9UQR0 700 aa8.4□□□□□ -1.06
UBE2D3-222ENST00000508238 CPQQ9Y646 472 aa8.4□□□□□ -1.06
UBE2D3-222ENST00000508238 MYO16Q9Y6X6 1858 aa8.4□□□□□ -1.07
UBE2D3-222ENST00000508238 CACNA1BQ00975 2339 aa8.4□□□□□ -1.07
UBE2D3-222ENST00000508238 EML5Q05BV3 1969 aa8.39□□□□□ -1.07
UBE2D3-222ENST00000508238 PSMA7O14818 248 aa8.39□□□□□ -1.07
UBE2D3-222ENST00000508238 CLSTN1O94985 981 aa8.39□□□□□ -1.07
UBE2D3-222ENST00000508238 CYP17A1P05093 508 aa8.39□□□□□ -1.07
UBE2D3-222ENST00000508238 RETP07949 1114 aa8.39□□□□□ -1.07
UBE2D3-222ENST00000508238 MBL2P11226 248 aaPredicted RBP8.39□□□□□ -1.07
UBE2D3-222ENST00000508238 GPC1P35052 558 aa8.39□□□□□ -1.07
UBE2D3-222ENST00000508238 OPRD1P41143 372 aa8.39□□□□□ -1.07
UBE2D3-222ENST00000508238 KIF11P52732 1056 aa8.39□□□□□ -1.07
UBE2D3-222ENST00000508238 PMS1P54277 932 aaKnown RBP8.39□□□□□ -1.07
UBE2D3-222ENST00000508238 MAP3K7CLP57077 242 aa8.39□□□□□ -1.07
UBE2D3-222ENST00000508238 DMWDQ09019 674 aa8.39□□□□□ -1.07
UBE2D3-222ENST00000508238 ORC1Q13415 861 aa8.39□□□□□ -1.07
UBE2D3-222ENST00000508238 DHCR24Q15392 516 aa8.39□□□□□ -1.07
UBE2D3-222ENST00000508238 NAIF1Q69YI7 327 aaPredicted RBP8.39□□□□□ -1.07
UBE2D3-222ENST00000508238 TMEM214Q6NUQ4 689 aaKnown RBP8.39□□□□□ -1.07
UBE2D3-222ENST00000508238 PKN3Q6P5Z2 889 aa8.39□□□□□ -1.07
UBE2D3-222ENST00000508238 KIAA2013Q8IYS2 634 aa8.39□□□□□ -1.07
UBE2D3-222ENST00000508238 SCG3Q8WXD2 468 aaKnown RBP8.39□□□□□ -1.07
UBE2D3-222ENST00000508238 SLC35C1Q96A29 364 aa8.39□□□□□ -1.07
UBE2D3-222ENST00000508238 CEP63Q96MT8 703 aa8.39□□□□□ -1.07
UBE2D3-222ENST00000508238 DUSP16Q9BY84 665 aa8.39□□□□□ -1.07
UBE2D3-222ENST00000508238 METTL14Q9HCE5 456 aaKnown RBP8.39□□□□□ -1.07
UBE2D3-222ENST00000508238 TLR8Q9NR97 1041 aaKnown RBP8.39□□□□□ -1.07
UBE2D3-222ENST00000508238 CISHQ9NSE2 258 aa8.39□□□□□ -1.07
UBE2D3-222ENST00000508238 FAM49BQ9NUQ9 324 aa8.39□□□□□ -1.07
UBE2D3-222ENST00000508238 SMPD4Q9NXE4 827 aa8.39□□□□□ -1.07
UBE2D3-222ENST00000508238 GMIPQ9P107 970 aa8.39□□□□□ -1.07
UBE2D3-222ENST00000508238 NCDNQ9UBB6 729 aa8.39□□□□□ -1.07
UBE2D3-222ENST00000508238 ARMCX3Q9UH62 379 aaPredicted RBP8.39□□□□□ -1.07
UBE2D3-222ENST00000508238 EBF1Q9UH73 591 aa8.39□□□□□ -1.07
UBE2D3-222ENST00000508238 RAB23Q9ULC3 237 aa8.39□□□□□ -1.07
UBE2D3-222ENST00000508238 USP3Q9Y6I4 520 aa8.39□□□□□ -1.07
UBE2D3-222ENST00000508238 DNAH14Q0VDD8 3507 aa8.38□□□□□ -1.07
UBE2D3-222ENST00000508238 TTLL8A6PVC2 850 aa8.38□□□□□ -1.07
UBE2D3-222ENST00000508238 PRR5-ARHGAP8B1AHC4 643 aa8.38□□□□□ -1.07
UBE2D3-222ENST00000508238 K7EQS6 105 aa8.38□□□□□ -1.07
UBE2D3-222ENST00000508238 GREM1O60565 184 aa8.38□□□□□ -1.07
UBE2D3-222ENST00000508238 TLR5O60602 858 aa8.38□□□□□ -1.07
UBE2D3-222ENST00000508238 CD58P19256 250 aa8.38□□□□□ -1.07
UBE2D3-222ENST00000508238 SDHBP21912 280 aa8.38□□□□□ -1.07
UBE2D3-222ENST00000508238 BMP6P22004 513 aa8.38□□□□□ -1.07
UBE2D3-222ENST00000508238 ID4P47928 161 aa8.38□□□□□ -1.07
UBE2D3-222ENST00000508238 PGFP49763 221 aa8.38□□□□□ -1.07
UBE2D3-222ENST00000508238 RAD23BP54727 409 aa8.38□□□□□ -1.07
UBE2D3-222ENST00000508238 ARHGAP8P85298 464 aa8.38□□□□□ -1.07
UBE2D3-222ENST00000508238 IFRD2Q12894 506 aaPredicted RBP8.38□□□□□ -1.07
UBE2D3-222ENST00000508238 STIM1Q13586 685 aa8.38□□□□□ -1.07
UBE2D3-222ENST00000508238 SIM2Q14190 667 aaPredicted RBP8.38□□□□□ -1.07
UBE2D3-222ENST00000508238 OCLNQ16625 522 aa8.38□□□□□ -1.07
UBE2D3-222ENST00000508238 HSF5Q4G112 596 aaPredicted RBP8.38□□□□□ -1.07
UBE2D3-222ENST00000508238 CBWD6Q4V339 395 aa8.38□□□□□ -1.07
UBE2D3-222ENST00000508238 CBWD3Q5JTY5 395 aa8.38□□□□□ -1.07
UBE2D3-222ENST00000508238 CBWD5Q5RIA9 395 aa8.38□□□□□ -1.07
UBE2D3-222ENST00000508238 ARHGAP17Q68EM7 881 aa8.38□□□□□ -1.07
UBE2D3-222ENST00000508238 HTR3DQ70Z44 454 aa8.38□□□□□ -1.07
UBE2D3-222ENST00000508238 ERMP1Q7Z2K6 904 aa8.38□□□□□ -1.07
UBE2D3-222ENST00000508238 CCDC186Q7Z3E2 898 aa8.38□□□□□ -1.07
UBE2D3-222ENST00000508238 ANKRD52Q8NB46 1076 aa8.38□□□□□ -1.07
UBE2D3-222ENST00000508238 SLC4A11Q8NBS3 891 aa8.38□□□□□ -1.07
UBE2D3-222ENST00000508238 TTC16Q8NEE8 873 aa8.38□□□□□ -1.07
UBE2D3-222ENST00000508238 USP33Q8TEY7 942 aa8.38□□□□□ -1.07
UBE2D3-222ENST00000508238 GAB3Q8WWW8 586 aa8.38□□□□□ -1.07
UBE2D3-222ENST00000508238 ERCC4Q92889 916 aaPredicted RBP8.38□□□□□ -1.07
UBE2D3-222ENST00000508238 ACDQ96AP0 544 aa8.38□□□□□ -1.07
UBE2D3-222ENST00000508238 TMEM176AQ96HP8 235 aa8.38□□□□□ -1.07
UBE2D3-222ENST00000508238 LOXL4Q96JB6 756 aa8.38□□□□□ -1.07
UBE2D3-222ENST00000508238 ZC3H10Q96K80 434 aaKnown RBP8.38□□□□□ -1.07
UBE2D3-222ENST00000508238 HEXIM2Q96MH2 286 aaKnown RBP8.38□□□□□ -1.07
UBE2D3-222ENST00000508238 CCSER2Q9H7U1 834 aa8.38□□□□□ -1.07
UBE2D3-222ENST00000508238 MMRN2Q9H8L6 949 aa8.38□□□□□ -1.07
UBE2D3-222ENST00000508238 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.38□□□□□ -1.071e-6■■■■■ 64.2
UBE2D3-222ENST00000508238 DLL3Q9NYJ7 618 aa8.38□□□□□ -1.07
UBE2D3-222ENST00000508238 CLIC5Q9NZA1 410 aa8.38□□□□□ -1.07
UBE2D3-222ENST00000508238 GMEB2Q9UKD1 530 aa8.38□□□□□ -1.07
UBE2D3-222ENST00000508238 SLC8A2Q9UPR5 921 aa8.38□□□□□ -1.07
UBE2D3-222ENST00000508238 ASCC3Q8N3C0 2202 aaKnown RBP8.38□□□□□ -1.07
UBE2D3-222ENST00000508238 KIAA1549LQ6ZVL6 1849 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms