RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 NLRC4Q9NPP4 1024 aa10.29□□□□□ -0.76
NR1I3-220ENST00000505005 C11orf16Q9NQ32 467 aa10.29□□□□□ -0.76
NR1I3-220ENST00000505005 ZNHIT6Q9NWK9 470 aaKnown RBP10.29□□□□□ -0.76
NR1I3-220ENST00000505005 DONSONQ9NYP3 566 aa10.29□□□□□ -0.76
NR1I3-220ENST00000505005 MARK1Q9P0L2 795 aa10.29□□□□□ -0.76
NR1I3-220ENST00000505005 DEC1Q9P2X7 70 aa10.29□□□□□ -0.76
NR1I3-220ENST00000505005 CCL26Q9Y258 94 aa10.29□□□□□ -0.76
NR1I3-220ENST00000505005 TLR6Q9Y2C9 796 aa10.29□□□□□ -0.76
NR1I3-220ENST00000505005 MYO16Q9Y6X6 1858 aa10.29□□□□□ -0.76
NR1I3-220ENST00000505005 A0A0A0MRY4 1105 aa10.28□□□□□ -0.76
NR1I3-220ENST00000505005 CCDC163A0A0D9SF12 145 aa10.28□□□□□ -0.76
NR1I3-220ENST00000505005 SLC12A8A0AV02 714 aa10.28□□□□□ -0.76
NR1I3-220ENST00000505005 YJEFN3A6XGL0 299 aa10.28□□□□□ -0.76
NR1I3-220ENST00000505005 E7ENQ6 273 aa10.28□□□□□ -0.76
NR1I3-220ENST00000505005 HOXC11O43248 304 aaPredicted RBP10.28□□□□□ -0.76
NR1I3-220ENST00000505005 GFPT2O94808 682 aa10.28□□□□□ -0.76
NR1I3-220ENST00000505005 GZMAP12544 262 aa10.28□□□□□ -0.76
NR1I3-220ENST00000505005 ABCB4P21439 1286 aa10.28□□□□□ -0.76
NR1I3-220ENST00000505005 TNFAIP3P21580 790 aa10.28□□□□□ -0.76
NR1I3-220ENST00000505005 CCR1P32246 355 aa10.28□□□□□ -0.76
NR1I3-220ENST00000505005 CNR2P34972 360 aa10.28□□□□□ -0.76
NR1I3-220ENST00000505005 GRIA2P42262 883 aa10.28□□□□□ -0.76
NR1I3-220ENST00000505005 RGS7P49802 495 aa10.28□□□□□ -0.76
NR1I3-220ENST00000505005 CDR1P51861 262 aa10.28□□□□□ -0.76
NR1I3-220ENST00000505005 TBX4P57082 545 aa10.28□□□□□ -0.76
NR1I3-220ENST00000505005 MRPS21P82921 87 aaKnown RBP10.28□□□□□ -0.76
NR1I3-220ENST00000505005 DHCR24Q15392 516 aa10.28□□□□□ -0.76
NR1I3-220ENST00000505005 TMEM196Q5HYL7 178 aa10.28□□□□□ -0.76
NR1I3-220ENST00000505005 ADGRF1Q5T601 910 aa10.28□□□□□ -0.76
NR1I3-220ENST00000505005 TTC39BQ5VTQ0 682 aaPredicted RBP10.28□□□□□ -0.76
NR1I3-220ENST00000505005 SFMBT2Q5VUG0 894 aa10.28□□□□□ -0.76
NR1I3-220ENST00000505005 OR6B2Q6IFH4 312 aa10.28□□□□□ -0.76
NR1I3-220ENST00000505005 GJB7Q6PEY0 223 aa10.28□□□□□ -0.76
NR1I3-220ENST00000505005 GPRIN1Q7Z2K8 1008 aa10.28□□□□□ -0.76
NR1I3-220ENST00000505005 MIB1Q86YT6 1006 aa10.28□□□□□ -0.76
NR1I3-220ENST00000505005 C1orf210Q8IVY1 113 aa10.28□□□□□ -0.76
NR1I3-220ENST00000505005 DRC7Q8IY82 874 aa10.28□□□□□ -0.76
NR1I3-220ENST00000505005 CAMKK1Q8N5S9 505 aa10.28□□□□□ -0.76
NR1I3-220ENST00000505005 TTC16Q8NEE8 873 aa10.28□□□□□ -0.76
NR1I3-220ENST00000505005 FEZF2Q8TBJ5 459 aa10.28□□□□□ -0.76
NR1I3-220ENST00000505005 EPS8L1Q8TE68 723 aa10.28□□□□□ -0.76
NR1I3-220ENST00000505005 SLC22A12Q96S37 553 aa10.28□□□□□ -0.76
NR1I3-220ENST00000505005 CHRDQ9H2X0 955 aa10.28□□□□□ -0.76
NR1I3-220ENST00000505005 SMOC2Q9H3U7 446 aa10.28□□□□□ -0.76
NR1I3-220ENST00000505005 LMAN1LQ9HAT1 526 aa10.28□□□□□ -0.76
NR1I3-220ENST00000505005 NMUR1Q9HB89 426 aa10.28□□□□□ -0.76
NR1I3-220ENST00000505005 SMPD4Q9NXE4 827 aa10.28□□□□□ -0.76
NR1I3-220ENST00000505005 GTSE1Q9NYZ3 720 aa10.28□□□□□ -0.76
NR1I3-220ENST00000505005 AIPL1Q9NZN9 384 aa10.28□□□□□ -0.76
NR1I3-220ENST00000505005 LCMT1Q9UIC8 334 aa10.28□□□□□ -0.76
NR1I3-220ENST00000505005 STOML2Q9UJZ1 356 aa10.28□□□□□ -0.76
NR1I3-220ENST00000505005 LUC7L2Q9Y383 392 aaKnown RBP10.28□□□□□ -0.76
NR1I3-220ENST00000505005 MIA3Q5JRA6 1907 aa10.28□□□□□ -0.76
NR1I3-220ENST00000505005 ITIH6Q6UXX5 1313 aa10.28□□□□□ -0.76
NR1I3-220ENST00000505005 FAM86C2PA6NEL3 165 aa10.27□□□□□ -0.77
NR1I3-220ENST00000505005 GOLGA6L3A6NEY3 463 aa10.27□□□□□ -0.77
NR1I3-220ENST00000505005 CHURC1-FNTBB4DL54 471 aa10.27□□□□□ -0.77
NR1I3-220ENST00000505005 E5RJQ4 531 aa10.27□□□□□ -0.77
NR1I3-220ENST00000505005 STC2O76061 302 aa10.27□□□□□ -0.77
NR1I3-220ENST00000505005 PAPSS2O95340 614 aaPredicted RBP10.27□□□□□ -0.77
NR1I3-220ENST00000505005 ATP1A3P13637 1013 aa10.27□□□□□ -0.77
NR1I3-220ENST00000505005 COL9A1P20849 921 aa10.27□□□□□ -0.77
NR1I3-220ENST00000505005 HOXA6P31267 233 aa10.27□□□□□ -0.77
NR1I3-220ENST00000505005 MATKP42679 507 aa10.27□□□□□ -0.77
NR1I3-220ENST00000505005 CXCL12P48061 93 aa10.27□□□□□ -0.77
NR1I3-220ENST00000505005 GSCP56915 257 aaPredicted RBP10.27□□□□□ -0.77
NR1I3-220ENST00000505005 ZBED6P86452 979 aa10.27□□□□□ -0.77
NR1I3-220ENST00000505005 BYSLQ13895 437 aaKnown RBP10.27□□□□□ -0.77
NR1I3-220ENST00000505005 EIF4HQ15056 248 aaKnown RBP10.27□□□□□ -0.77
NR1I3-220ENST00000505005 ANO4Q32M45 955 aa10.27□□□□□ -0.77
NR1I3-220ENST00000505005 ARL13BQ3SXY8 428 aa10.27□□□□□ -0.77
NR1I3-220ENST00000505005 BRMS1LQ5PSV4 323 aa10.27□□□□□ -0.77
NR1I3-220ENST00000505005 DPY19L2P1Q6NXN4 242 aa10.27□□□□□ -0.77
NR1I3-220ENST00000505005 DENND1BQ6P3S1 775 aa10.27□□□□□ -0.77
NR1I3-220ENST00000505005 APTXQ7Z2E3 356 aaKnown RBP10.27□□□□□ -0.77
NR1I3-220ENST00000505005 LUZP1Q86V48 1076 aa10.27□□□□□ -0.77
NR1I3-220ENST00000505005 C11orf74Q86VG3 221 aa10.27□□□□□ -0.77
NR1I3-220ENST00000505005 RSPRY1Q96DX4 576 aa10.27□□□□□ -0.77
NR1I3-220ENST00000505005 TMA16Q96EY4 203 aaKnown RBP10.27□□□□□ -0.77
NR1I3-220ENST00000505005 ZFRQ96KR1 1074 aaKnown RBP10.27□□□□□ -0.77
NR1I3-220ENST00000505005 BTN2A3PQ96KV6 586 aa10.27□□□□□ -0.77
NR1I3-220ENST00000505005 BBS2Q9BXC9 721 aa10.27□□□□□ -0.77
NR1I3-220ENST00000505005 SMG9Q9H0W8 520 aaKnown RBP10.27□□□□□ -0.77
NR1I3-220ENST00000505005 HSD3B7Q9H2F3 369 aa10.27□□□□□ -0.77
NR1I3-220ENST00000505005 HPS4Q9NQG7 708 aa10.27□□□□□ -0.77
NR1I3-220ENST00000505005 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.27□□□□□ -0.77
NR1I3-220ENST00000505005 TJP2Q9UDY2 1190 aa10.27□□□□□ -0.77
NR1I3-220ENST00000505005 WNT6Q9Y6F9 365 aa10.27□□□□□ -0.77
NR1I3-220ENST00000505005 VCANP13611 3396 aa10.27□□□□□ -0.77
NR1I3-220ENST00000505005 F5P12259 2224 aa10.26□□□□□ -0.77
NR1I3-220ENST00000505005 KIF26AQ9ULI4 1882 aaPredicted RBP10.26□□□□□ -0.77
NR1I3-220ENST00000505005 PAPSS1O43252 624 aaPredicted RBP10.26□□□□□ -0.77
NR1I3-220ENST00000505005 ALDH1A2O94788 518 aa10.26□□□□□ -0.77
NR1I3-220ENST00000505005 MOCS3O95396 460 aa10.26□□□□□ -0.77
NR1I3-220ENST00000505005 ERBB2P04626 1255 aa10.26□□□□□ -0.77
NR1I3-220ENST00000505005 CYP1A1P04798 512 aaPredicted RBP10.26□□□□□ -0.77
NR1I3-220ENST00000505005 MYBL1P10243 752 aa10.26□□□□□ -0.77
NR1I3-220ENST00000505005 CHRNB1P11230 501 aa10.26□□□□□ -0.77
NR1I3-220ENST00000505005 CORO1AP31146 461 aaKnown RBP10.26□□□□□ -0.77
NR1I3-220ENST00000505005 PRKCIP41743 596 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms