RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 RNF8O76064 485 aa10.82□□□□□ -0.68
TPM3-217ENST00000504663 IGLV3-27P01718 113 aa10.82□□□□□ -0.68
TPM3-217ENST00000504663 KRT7P08729 469 aa10.82□□□□□ -0.68
TPM3-217ENST00000504663 KRT10P13645 584 aa10.82□□□□□ -0.68
TPM3-217ENST00000504663 L1CAMP32004 1257 aa10.82□□□□□ -0.68
TPM3-217ENST00000504663 TUFMP49411 452 aaKnown RBP10.82□□□□□ -0.68
TPM3-217ENST00000504663 CLCN4P51793 760 aa10.82□□□□□ -0.68
TPM3-217ENST00000504663 CREMQ03060 361 aa10.82□□□□□ -0.68
TPM3-217ENST00000504663 TAF10Q12962 218 aa10.82□□□□□ -0.68
TPM3-217ENST00000504663 MMRN1Q13201 1228 aa10.82□□□□□ -0.68
TPM3-217ENST00000504663 LLGL1Q15334 1064 aa10.82□□□□□ -0.68
TPM3-217ENST00000504663 KCTD19Q17RG1 926 aaPredicted RBP10.82□□□□□ -0.68
TPM3-217ENST00000504663 ERCC6LQ2NKX8 1250 aa10.82□□□□□ -0.68
TPM3-217ENST00000504663 SEL1L2Q5TEA6 688 aa10.82□□□□□ -0.68
TPM3-217ENST00000504663 PLPP4Q5VZY2 271 aa10.82□□□□□ -0.68
TPM3-217ENST00000504663 MON1AQ86VX9 555 aa10.82□□□□□ -0.68
TPM3-217ENST00000504663 VSIG1Q86XK7 387 aa10.82□□□□□ -0.68
TPM3-217ENST00000504663 RCOR2Q8IZ40 523 aa10.82□□□□□ -0.68
TPM3-217ENST00000504663 PYROXD2Q8N2H3 581 aa10.82□□□□□ -0.68
TPM3-217ENST00000504663 PQLC3Q8N755 202 aa10.82□□□□□ -0.68
TPM3-217ENST00000504663 MRPL43Q8N983 215 aaKnown RBP10.82□□□□□ -0.68
TPM3-217ENST00000504663 MNS1Q8NEH6 495 aa10.82□□□□□ -0.68
TPM3-217ENST00000504663 SLC7A14Q8TBB6 771 aa10.82□□□□□ -0.68
TPM3-217ENST00000504663 HDAC7Q8WUI4 952 aa10.82□□□□□ -0.68
TPM3-217ENST00000504663 FBXO32Q969P5 355 aa10.82□□□□□ -0.68
TPM3-217ENST00000504663 RBM41Q96IZ5 413 aaKnown RBP10.82□□□□□ -0.68
TPM3-217ENST00000504663 RPGRIP1Q96KN7 1286 aa10.82□□□□□ -0.68
TPM3-217ENST00000504663 FBXO44Q9H4M3 255 aa10.82□□□□□ -0.68
TPM3-217ENST00000504663 CYP4F11Q9HBI6 524 aa10.82□□□□□ -0.68
TPM3-217ENST00000504663 TLR9Q9NR96 1032 aa10.82□□□□□ -0.68
TPM3-217ENST00000504663 ABCC13Q9NSE7 274 aa10.82□□□□□ -0.68
TPM3-217ENST00000504663 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.82□□□□□ -0.68
TPM3-217ENST00000504663 ARHGEF38Q9NXL2 777 aa10.82□□□□□ -0.68
TPM3-217ENST00000504663 RRN3Q9NYV6 651 aa10.82□□□□□ -0.68
TPM3-217ENST00000504663 CLIC5Q9NZA1 410 aa10.82□□□□□ -0.68
TPM3-217ENST00000504663 STAP1Q9ULZ2 295 aa10.82□□□□□ -0.68
TPM3-217ENST00000504663 AP4E1Q9UPM8 1137 aa10.82□□□□□ -0.68
TPM3-217ENST00000504663 MYO7AQ13402 2215 aa10.82□□□□□ -0.68
TPM3-217ENST00000504663 DOCK4Q8N1I0 1966 aa10.81□□□□□ -0.68
TPM3-217ENST00000504663 LRRD1A4D1F6 860 aa10.81□□□□□ -0.68
TPM3-217ENST00000504663 H3BNC9 293 aa10.81□□□□□ -0.68
TPM3-217ENST00000504663 MSI1O43347 362 aaKnown RBP10.81□□□□□ -0.68
TPM3-217ENST00000504663 PRPSAP2O60256 369 aa10.81□□□□□ -0.68
TPM3-217ENST00000504663 ZRANB2O95218 330 aaKnown RBP eCLIP10.81□□□□□ -0.68
TPM3-217ENST00000504663 PAPLNO95428 1278 aa10.81□□□□□ -0.68
TPM3-217ENST00000504663 CXCL14O95715 111 aa10.81□□□□□ -0.68
TPM3-217ENST00000504663 PTGIRP43119 386 aa10.81□□□□□ -0.68
TPM3-217ENST00000504663 SSR1P43307 286 aaKnown RBP10.81□□□□□ -0.68
TPM3-217ENST00000504663 COPS2P61201 443 aa10.81□□□□□ -0.68
TPM3-217ENST00000504663 MRPS25P82663 173 aaKnown RBP10.81□□□□□ -0.68
TPM3-217ENST00000504663 DEUP1Q05D60 604 aa10.81□□□□□ -0.68
TPM3-217ENST00000504663 TWF1Q12792 350 aa10.81□□□□□ -0.68
TPM3-217ENST00000504663 SMC1AQ14683 1233 aaKnown RBP10.81□□□□□ -0.68
TPM3-217ENST00000504663 ELF2Q15723 593 aa10.81□□□□□ -0.68
TPM3-217ENST00000504663 HADHQ16836 314 aaKnown RBP10.81□□□□□ -0.68
TPM3-217ENST00000504663 LONRF2Q1L5Z9 754 aa10.81□□□□□ -0.68
TPM3-217ENST00000504663 BOLA3Q53S33 107 aa10.81□□□□□ -0.68
TPM3-217ENST00000504663 TFDP3Q5H9I0 405 aa10.81□□□□□ -0.68
TPM3-217ENST00000504663 TEX35Q5T0J7 233 aa10.81□□□□□ -0.68
TPM3-217ENST00000504663 ERMARDQ5T6L9 678 aa10.81□□□□□ -0.68
TPM3-217ENST00000504663 CCDC181Q5TID7 509 aa10.81□□□□□ -0.68
TPM3-217ENST00000504663 MANEALQ5VSG8 457 aa10.81□□□□□ -0.68
TPM3-217ENST00000504663 ADAT2Q7Z6V5 191 aaKnown RBP10.81□□□□□ -0.68
TPM3-217ENST00000504663 TNS4Q8IZW8 715 aa10.81□□□□□ -0.68
TPM3-217ENST00000504663 ZNF276Q8N554 614 aa10.81□□□□□ -0.68
TPM3-217ENST00000504663 PCDH19Q8TAB3 1148 aa10.81□□□□□ -0.68
TPM3-217ENST00000504663 SLC22A17Q8WUG5 538 aa10.81□□□□□ -0.68
TPM3-217ENST00000504663 OVCA2Q8WZ82 227 aa10.81□□□□□ -0.68
TPM3-217ENST00000504663 HSPH1Q92598 858 aa10.81□□□□□ -0.68
TPM3-217ENST00000504663 GOLGA1Q92805 767 aa10.81□□□□□ -0.68
TPM3-217ENST00000504663 PSMG2Q969U7 264 aa10.81□□□□□ -0.68
TPM3-217ENST00000504663 FCRL2Q96LA5 508 aaPredicted RBP10.81□□□□□ -0.68
TPM3-217ENST00000504663 SAMD11Q96NU1 681 aa10.81□□□□□ -0.68
TPM3-217ENST00000504663 TGS1Q96RS0 853 aaKnown RBP10.81□□□□□ -0.68
TPM3-217ENST00000504663 PNKPQ96T60 521 aa10.81□□□□□ -0.68
TPM3-217ENST00000504663 NCAPGQ9BPX3 1015 aa10.81□□□□□ -0.68
TPM3-217ENST00000504663 HEMGNQ9BXL5 484 aa10.81□□□□□ -0.68
TPM3-217ENST00000504663 UBE2OQ9C0C9 1292 aaKnown RBP10.81□□□□□ -0.68
TPM3-217ENST00000504663 DDX47Q9H0S4 455 aaKnown RBP10.81□□□□□ -0.68
TPM3-217ENST00000504663 NKX2-4Q9H2Z4 354 aa10.81□□□□□ -0.68
TPM3-217ENST00000504663 SFMBT1Q9UHJ3 866 aa10.81□□□□□ -0.68
TPM3-217ENST00000504663 NUDT5Q9UKK9 219 aa10.81□□□□□ -0.68
TPM3-217ENST00000504663 MTUS1Q9ULD2 1270 aa10.81□□□□□ -0.68
TPM3-217ENST00000504663 SSX2IPQ9Y2D8 614 aa10.81□□□□□ -0.68
TPM3-217ENST00000504663 EFR3BQ9Y2G0 817 aa10.81□□□□□ -0.68
TPM3-217ENST00000504663 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.81□□□□□ -0.68
TPM3-217ENST00000504663 C2orf16Q68DN1 1984 aa10.81□□□□□ -0.68
TPM3-217ENST00000504663 ZNF840PA6NDX5 716 aa10.8□□□□□ -0.68
TPM3-217ENST00000504663 KCNU1A8MYU2 1149 aa10.8□□□□□ -0.68
TPM3-217ENST00000504663 FAM72CH0Y354 149 aa10.8□□□□□ -0.68
TPM3-217ENST00000504663 CCDC188H7C350 402 aa10.8□□□□□ -0.68
TPM3-217ENST00000504663 RAD51CO43502 376 aa10.8□□□□□ -0.68
TPM3-217ENST00000504663 LPXNO60711 386 aa10.8□□□□□ -0.68
TPM3-217ENST00000504663 CLASP2O75122 1294 aaKnown RBP10.8□□□□□ -0.68
TPM3-217ENST00000504663 PHF2O75151 1096 aa10.8□□□□□ -0.68
TPM3-217ENST00000504663 TBX18O95935 607 aa10.8□□□□□ -0.68
TPM3-217ENST00000504663 F11P03951 625 aa10.8□□□□□ -0.68
TPM3-217ENST00000504663 SPATA31D3P0C874 917 aa10.8□□□□□ -0.68
TPM3-217ENST00000504663 RARGP13631 454 aa10.8□□□□□ -0.68
TPM3-217ENST00000504663 PECAM1P16284 738 aaPredicted RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms