RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 TPBGLP0DKB5 382 aa16.99■□□□□ 0.31
PCDHA1-203ENST00000504120 RHOAP61586 193 aa16.99■□□□□ 0.31
PCDHA1-203ENST00000504120 HERC6Q8IVU3 1022 aa16.99■□□□□ 0.31
PCDHA1-203ENST00000504120 SH3GL1Q99961 368 aa16.99■□□□□ 0.31
PCDHA1-203ENST00000504120 LRRC4BQ9NT99 713 aa16.99■□□□□ 0.31
PCDHA1-203ENST00000504120 ACKR2O00590 384 aa16.99■□□□□ 0.31
PCDHA1-203ENST00000504120 SLC12A3P55017 1021 aa16.99■□□□□ 0.31
PCDHA1-203ENST00000504120 DDX39BQ13838 428 aaKnown RBP16.99■□□□□ 0.31
PCDHA1-203ENST00000504120 PDPK2PQ6A1A2 396 aa16.99■□□□□ 0.31
PCDHA1-203ENST00000504120 NT5DC3Q86UY8 548 aa16.99■□□□□ 0.31
PCDHA1-203ENST00000504120 MAP4K3Q8IVH8 894 aa16.99■□□□□ 0.31
PCDHA1-203ENST00000504120 REPS2Q8NFH8 660 aa16.99■□□□□ 0.31
PCDHA1-203ENST00000504120 VPS28Q9UK41 221 aa16.99■□□□□ 0.31
PCDHA1-203ENST00000504120 A0A087X0B3 334 aa16.98■□□□□ 0.31
PCDHA1-203ENST00000504120 PLA2G6O60733 806 aa16.98■□□□□ 0.31
PCDHA1-203ENST00000504120 FKBP6O75344 327 aa16.98■□□□□ 0.31
PCDHA1-203ENST00000504120 CKMP06732 381 aa16.98■□□□□ 0.31
PCDHA1-203ENST00000504120 PYGMP11217 842 aa16.98■□□□□ 0.31
PCDHA1-203ENST00000504120 CSHL1Q14406 222 aa16.98■□□□□ 0.31
PCDHA1-203ENST00000504120 ACAP1Q15027 740 aa16.98■□□□□ 0.31
PCDHA1-203ENST00000504120 LY6KQ17RY6 165 aa16.98■□□□□ 0.31
PCDHA1-203ENST00000504120 GRTP1Q5TC63 336 aa16.98■□□□□ 0.31
PCDHA1-203ENST00000504120 SLC27A1Q6PCB7 646 aa16.98■□□□□ 0.31
PCDHA1-203ENST00000504120 SLC30A10Q6XR72 485 aa16.98■□□□□ 0.31
PCDHA1-203ENST00000504120 CENPLQ8N0S6 344 aaPredicted RBP16.98■□□□□ 0.31
PCDHA1-203ENST00000504120 ZNF786Q8N393 782 aa16.98■□□□□ 0.31
PCDHA1-203ENST00000504120 SEPT8Q92599 483 aa16.98■□□□□ 0.31
PCDHA1-203ENST00000504120 IL1RAPL1Q9NZN1 696 aa16.98■□□□□ 0.31
PCDHA1-203ENST00000504120 GHRP10912 638 aa16.98■□□□□ 0.31
PCDHA1-203ENST00000504120 ZNF23P17027 643 aa16.98■□□□□ 0.31
PCDHA1-203ENST00000504120 NCKAP1LP55160 1127 aa16.98■□□□□ 0.31
PCDHA1-203ENST00000504120 BMPR2Q13873 1038 aa16.98■□□□□ 0.31
PCDHA1-203ENST00000504120 ZNF284Q2VY69 593 aa16.98■□□□□ 0.31
PCDHA1-203ENST00000504120 CCDC153Q494R4 210 aa16.98■□□□□ 0.31
PCDHA1-203ENST00000504120 OTOAQ7RTW8 1153 aa16.98■□□□□ 0.31
PCDHA1-203ENST00000504120 KIAA2013Q8IYS2 634 aa16.98■□□□□ 0.31
PCDHA1-203ENST00000504120 SRPK1Q96SB4 655 aaKnown RBP16.98■□□□□ 0.31
PCDHA1-203ENST00000504120 AP4S1Q9Y587 144 aa16.98■□□□□ 0.31
PCDHA1-203ENST00000504120 ENO4A6NNW6 628 aa16.98■□□□□ 0.31
PCDHA1-203ENST00000504120 CXCL11O14625 94 aa16.98■□□□□ 0.31
PCDHA1-203ENST00000504120 ELK3P41970 407 aa16.98■□□□□ 0.31
PCDHA1-203ENST00000504120 RPL21P46778 160 aaKnown RBP16.98■□□□□ 0.31
PCDHA1-203ENST00000504120 CYP51A1Q16850 503 aa16.98■□□□□ 0.31
PCDHA1-203ENST00000504120 CD248Q9HCU0 757 aa16.98■□□□□ 0.31
PCDHA1-203ENST00000504120 RBM22Q9NW64 420 aaKnown RBP eCLIP16.98■□□□□ 0.31
PCDHA1-203ENST00000504120 LZTS1Q9Y250 596 aa16.98■□□□□ 0.31
PCDHA1-203ENST00000504120 DCDC2CA8MYV0 355 aa16.98■□□□□ 0.31
PCDHA1-203ENST00000504120 CYTH3O43739 400 aa16.98■□□□□ 0.31
PCDHA1-203ENST00000504120 ZNF286BP0CG31 522 aa16.98■□□□□ 0.31
PCDHA1-203ENST00000504120 GP5P40197 560 aa16.98■□□□□ 0.31
PCDHA1-203ENST00000504120 FKBP1AP62942 108 aaKnown RBP16.98■□□□□ 0.31
PCDHA1-203ENST00000504120 PAN2Q504Q3 1202 aaKnown RBP16.98■□□□□ 0.31
PCDHA1-203ENST00000504120 MARC1Q5VT66 337 aa16.98■□□□□ 0.31
PCDHA1-203ENST00000504120 PLEKHM3Q6ZWE6 761 aa16.98■□□□□ 0.31
PCDHA1-203ENST00000504120 TLR8Q9NR97 1041 aaKnown RBP16.98■□□□□ 0.31
PCDHA1-203ENST00000504120 SETD4Q9NVD3 440 aa16.98■□□□□ 0.31
PCDHA1-203ENST00000504120 TRHDEQ9UKU6 1024 aa16.98■□□□□ 0.31
PCDHA1-203ENST00000504120 SNX13Q9Y5W8 968 aa16.98■□□□□ 0.31
PCDHA1-203ENST00000504120 URODP06132 367 aa16.98■□□□□ 0.31
PCDHA1-203ENST00000504120 ATP6V1B1P15313 513 aa16.98■□□□□ 0.31
PCDHA1-203ENST00000504120 AXLP30530 894 aa16.98■□□□□ 0.31
PCDHA1-203ENST00000504120 PRKAA2P54646 552 aa16.98■□□□□ 0.31
PCDHA1-203ENST00000504120 YWHAZP63104 245 aaKnown RBP16.98■□□□□ 0.31
PCDHA1-203ENST00000504120 DNAAF5Q86Y56 855 aa16.98■□□□□ 0.31
PCDHA1-203ENST00000504120 ARRDC4Q8NCT1 418 aa16.98■□□□□ 0.31
PCDHA1-203ENST00000504120 ATXN2LQ8WWM7 1075 aaKnown RBP16.98■□□□□ 0.31
PCDHA1-203ENST00000504120 PRKD2Q9BZL6 878 aa16.98■□□□□ 0.31
PCDHA1-203ENST00000504120 KANSL3Q9P2N6 904 aa16.98■□□□□ 0.31
PCDHA1-203ENST00000504120 MICAL2O94851 1124 aa16.97■□□□□ 0.31
PCDHA1-203ENST00000504120 RARAP10276 462 aa16.97■□□□□ 0.31
PCDHA1-203ENST00000504120 PGAM1P18669 254 aa16.97■□□□□ 0.31
PCDHA1-203ENST00000504120 EIF4BP23588 611 aaKnown RBP16.97■□□□□ 0.31
PCDHA1-203ENST00000504120 ZCWPW2Q504Y3 356 aa16.97■□□□□ 0.31
PCDHA1-203ENST00000504120 ATP6AP1LQ52LC2 224 aa16.97■□□□□ 0.31
PCDHA1-203ENST00000504120 SPDYCQ5MJ68 293 aa16.97■□□□□ 0.31
PCDHA1-203ENST00000504120 SH3RF1Q7Z6J0 888 aa16.97■□□□□ 0.31
PCDHA1-203ENST00000504120 HTR3CQ8WXA8 447 aa16.97■□□□□ 0.31
PCDHA1-203ENST00000504120 E9PBE3 544 aa16.97■□□□□ 0.31
PCDHA1-203ENST00000504120 LZTS3O60299 673 aaPredicted RBP16.97■□□□□ 0.31
PCDHA1-203ENST00000504120 KLHL41O60662 606 aa16.97■□□□□ 0.31
PCDHA1-203ENST00000504120 UBOX5O94941 541 aa16.97■□□□□ 0.31
PCDHA1-203ENST00000504120 PSMC3P17980 439 aa16.97■□□□□ 0.31
PCDHA1-203ENST00000504120 CD151P48509 253 aa16.97■□□□□ 0.31
PCDHA1-203ENST00000504120 NUP107P57740 925 aa16.97■□□□□ 0.31
PCDHA1-203ENST00000504120 C3orf67Q6ZVT6 689 aa16.97■□□□□ 0.31
PCDHA1-203ENST00000504120 ILDR2Q71H61 639 aa16.97■□□□□ 0.31
PCDHA1-203ENST00000504120 FBXO44Q9H4M3 255 aa16.97■□□□□ 0.31
PCDHA1-203ENST00000504120 GDF3Q9NR23 364 aa16.97■□□□□ 0.31
PCDHA1-203ENST00000504120 LRRC10BA6NIK2 292 aa16.97■□□□□ 0.31
PCDHA1-203ENST00000504120 EPHX2P34913 555 aa16.97■□□□□ 0.31
PCDHA1-203ENST00000504120 NPY2RP49146 381 aa16.97■□□□□ 0.31
PCDHA1-203ENST00000504120 ALDH5A1P51649 535 aaPredicted RBP16.97■□□□□ 0.31
PCDHA1-203ENST00000504120 ERVK-9P63128 1117 aa16.97■□□□□ 0.31
PCDHA1-203ENST00000504120 CAMK2GQ13555 558 aaPredicted RBP16.97■□□□□ 0.31
PCDHA1-203ENST00000504120 LRRC8DQ7L1W4 858 aa16.97■□□□□ 0.31
PCDHA1-203ENST00000504120 OPTNQ96CV9 577 aa16.97■□□□□ 0.31
PCDHA1-203ENST00000504120 MTMR9Q96QG7 549 aa16.97■□□□□ 0.31
PCDHA1-203ENST00000504120 STRNO43815 780 aa16.97■□□□□ 0.31
PCDHA1-203ENST00000504120 SERPINE1P05121 402 aa16.97■□□□□ 0.31
PCDHA1-203ENST00000504120 HOXC6P09630 235 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms