RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 DPYSL3Q14195 570 aa8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 PPP2R5DQ14738 602 aa8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 ATP13A4Q4VNC1 1196 aa8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 PABPC1LQ4VXU2 614 aaKnown RBP8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 KCNT1Q5JUK3 1230 aa8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 SH3PXD2AQ5TCZ1 1133 aa8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 DAB2IPQ5VWQ8 1189 aa8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 SYPL2Q5VXT5 272 aa8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 KAZNQ674X7 775 aa8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 TXNRD3NBQ6F5E7 133 aa8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 KLHDC10Q6PID8 442 aa8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 CCDC137Q6PK04 289 aaKnown RBP8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 CYP4V2Q6ZWL3 525 aaPredicted RBP8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 PDZD4Q76G19 769 aaPredicted RBP8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 SCD5Q86SK9 330 aa8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 RFX6Q8HWS3 928 aa8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 KLHL7Q8IXQ5 586 aa8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 CCDC105Q8IYK2 499 aa8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 ELMOD1Q8N336 334 aa8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 PRELID2Q8N945 189 aa8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 LRRN4CLQ8ND94 238 aa8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 ATL2Q8NHH9 583 aa8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 DQX1Q8TE96 717 aaKnown RBP8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 TSC1Q92574 1164 aa8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 NDRG1Q92597 394 aaKnown RBP8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 EDEM1Q92611 657 aa8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 RNF34Q969K3 372 aa8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 HAUS1Q96CS2 278 aa8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 FAF2Q96CS3 445 aa8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 MYRFLQ96LU7 910 aa8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 RNF157Q96PX1 679 aa8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 TGS1Q96RS0 853 aaKnown RBP8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 HAPLN3Q96S86 360 aa8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 PEBP4Q96S96 227 aa8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 RHOXF2Q9BQY4 288 aa8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 CALN1Q9BXU9 219 aa8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 PCDH18Q9HCL0 1135 aa8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 WDR6Q9NNW5 1121 aaKnown RBP8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 ENTPD7Q9NQZ7 604 aa8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 TLR9Q9NR96 1032 aa8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 DONSONQ9NYP3 566 aa8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 SMARCAL1Q9NZC9 954 aa8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 GMIPQ9P107 970 aa8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 FBXW11Q9UKB1 542 aa8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 DRG1Q9Y295 367 aaKnown RBP8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 TLR6Q9Y2C9 796 aa8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 YIPF1Q9Y548 306 aa8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 PATJQ8NI35 1801 aa8.45□□□□□ -1.06
TOPBP1-202ENST00000503338 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.44□□□□□ -1.06
TOPBP1-202ENST00000503338 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.44□□□□□ -1.06
TOPBP1-202ENST00000503338 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.44□□□□□ -1.06
TOPBP1-202ENST00000503338 PI4K2BG5E9Z4 385 aa8.44□□□□□ -1.06
TOPBP1-202ENST00000503338 APOL1O14791 398 aa8.44□□□□□ -1.06
TOPBP1-202ENST00000503338 CST8O60676 142 aa8.44□□□□□ -1.06
TOPBP1-202ENST00000503338 ECEL1O95672 775 aa8.44□□□□□ -1.06
TOPBP1-202ENST00000503338 FGF19O95750 216 aa8.44□□□□□ -1.06
TOPBP1-202ENST00000503338 GLUD1P00367 558 aa8.44□□□□□ -1.06
TOPBP1-202ENST00000503338 CNPP09543 421 aaKnown RBP8.44□□□□□ -1.06
TOPBP1-202ENST00000503338 ZDHHC11BP0C7U3 371 aa8.44□□□□□ -1.06
TOPBP1-202ENST00000503338 RARGP13631 454 aa8.44□□□□□ -1.06
TOPBP1-202ENST00000503338 PFKLP17858 780 aa8.44□□□□□ -1.06
TOPBP1-202ENST00000503338 ATF6P18850 670 aa8.44□□□□□ -1.06
TOPBP1-202ENST00000503338 TFE3P19532 575 aaPredicted RBP8.44□□□□□ -1.06
TOPBP1-202ENST00000503338 DNAJB2P25686 324 aa8.44□□□□□ -1.06
TOPBP1-202ENST00000503338 KLRC2P26717 231 aa8.44□□□□□ -1.06
TOPBP1-202ENST00000503338 L1CAMP32004 1257 aa8.44□□□□□ -1.06
TOPBP1-202ENST00000503338 CA8P35219 290 aa8.44□□□□□ -1.06
TOPBP1-202ENST00000503338 MAGEA10P43363 369 aaPredicted RBP8.44□□□□□ -1.06
TOPBP1-202ENST00000503338 NR2C2P49116 596 aa8.44□□□□□ -1.06
TOPBP1-202ENST00000503338 GPR15P49685 360 aa8.44□□□□□ -1.06
TOPBP1-202ENST00000503338 RABGGTBP53611 331 aa8.44□□□□□ -1.06
TOPBP1-202ENST00000503338 DRG2P55039 364 aaKnown RBP8.44□□□□□ -1.06
TOPBP1-202ENST00000503338 DR1Q01658 176 aa8.44□□□□□ -1.06
TOPBP1-202ENST00000503338 TAF10Q12962 218 aa8.44□□□□□ -1.06
TOPBP1-202ENST00000503338 EIF4EBP2Q13542 120 aaPredicted RBP8.44□□□□□ -1.06
TOPBP1-202ENST00000503338 CUL1Q13616 776 aa8.44□□□□□ -1.06
TOPBP1-202ENST00000503338 SIX1Q15475 284 aaPredicted RBP8.44□□□□□ -1.06
TOPBP1-202ENST00000503338 RAB30Q15771 203 aa8.44□□□□□ -1.06
TOPBP1-202ENST00000503338 SDHAF4Q5VUM1 108 aa8.44□□□□□ -1.06
TOPBP1-202ENST00000503338 AADACL2Q6P093 401 aa8.44□□□□□ -1.06
TOPBP1-202ENST00000503338 ADAT2Q7Z6V5 191 aaKnown RBP8.44□□□□□ -1.06
TOPBP1-202ENST00000503338 TAC4Q86UU9 113 aa8.44□□□□□ -1.06
TOPBP1-202ENST00000503338 FAM131BQ86XD5 332 aa8.44□□□□□ -1.06
TOPBP1-202ENST00000503338 TTC9BQ8N6N2 239 aa8.44□□□□□ -1.06
TOPBP1-202ENST00000503338 MRPL43Q8N983 215 aaKnown RBP8.44□□□□□ -1.06
TOPBP1-202ENST00000503338 BBOF1Q8ND07 529 aa8.44□□□□□ -1.06
TOPBP1-202ENST00000503338 SPPL3Q8TCT6 385 aa8.44□□□□□ -1.06
TOPBP1-202ENST00000503338 HDAC7Q8WUI4 952 aa8.44□□□□□ -1.06
TOPBP1-202ENST00000503338 POF1BQ8WVV4 589 aa8.44□□□□□ -1.06
TOPBP1-202ENST00000503338 HNRNPLLQ8WVV9 542 aaKnown RBP8.44□□□□□ -1.06
TOPBP1-202ENST00000503338 P3H4Q92791 437 aa8.44□□□□□ -1.06
TOPBP1-202ENST00000503338 NKD2Q969F2 451 aaPredicted RBP8.44□□□□□ -1.06
TOPBP1-202ENST00000503338 PSMG2Q969U7 264 aa8.44□□□□□ -1.06
TOPBP1-202ENST00000503338 ZNF512Q96ME7 567 aaPredicted RBP8.44□□□□□ -1.06
TOPBP1-202ENST00000503338 KLHL5Q96PQ7 755 aa8.44□□□□□ -1.06
TOPBP1-202ENST00000503338 EPAS1Q99814 870 aa8.44□□□□□ -1.06
TOPBP1-202ENST00000503338 TCF25Q9BQ70 676 aa8.44□□□□□ -1.06
TOPBP1-202ENST00000503338 FERMT1Q9BQL6 677 aa8.44□□□□□ -1.06
TOPBP1-202ENST00000503338 LRRC1Q9BTT6 524 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms