RNA–Protein interactions for RNA: ENST00000503004.5

CLDND1-208, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-208ENST00000503004 RCOR2Q8IZ40 523 aa5.35□□□□□ -1.55
CLDND1-208ENST00000503004 GPC2Q8N158 579 aa5.35□□□□□ -1.55
CLDND1-208ENST00000503004 C4orf33Q8N1A6 199 aa5.35□□□□□ -1.55
CLDND1-208ENST00000503004 RIBC1Q8N443 379 aaPredicted RBP5.35□□□□□ -1.55
CLDND1-208ENST00000503004 ZCCHC9Q8N567 271 aaKnown RBP5.35□□□□□ -1.55
CLDND1-208ENST00000503004 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.35□□□□□ -1.55
CLDND1-208ENST00000503004 ALLCQ8N6M5 410 aa5.35□□□□□ -1.55
CLDND1-208ENST00000503004 C1orf127Q8N9H9 656 aa5.35□□□□□ -1.55
CLDND1-208ENST00000503004 ACTL9Q8TC94 416 aa5.35□□□□□ -1.55
CLDND1-208ENST00000503004 CASP10Q92851 521 aa5.35□□□□□ -1.55
CLDND1-208ENST00000503004 HSPBAP1Q96EW2 488 aa5.35□□□□□ -1.55
CLDND1-208ENST00000503004 PIWIL1Q96J94 861 aaKnown RBP5.35□□□□□ -1.55
CLDND1-208ENST00000503004 CGREF1Q99674 301 aa5.35□□□□□ -1.55
CLDND1-208ENST00000503004 MAK16Q9BXY0 300 aaKnown RBP5.35□□□□□ -1.55
CLDND1-208ENST00000503004 RAB6CQ9H0N0 254 aa5.35□□□□□ -1.55
CLDND1-208ENST00000503004 SDCBP2Q9H190 292 aa5.35□□□□□ -1.55
CLDND1-208ENST00000503004 CDT1Q9H211 546 aa5.35□□□□□ -1.55
CLDND1-208ENST00000503004 CCDC134Q9H6E4 229 aa5.35□□□□□ -1.55
CLDND1-208ENST00000503004 SMYD3Q9H7B4 428 aa5.35□□□□□ -1.55
CLDND1-208ENST00000503004 SPC25Q9HBM1 224 aa5.35□□□□□ -1.55
CLDND1-208ENST00000503004 PTPRHQ9HD43 1115 aa5.35□□□□□ -1.55
CLDND1-208ENST00000503004 EURLQ9NYK6 297 aa5.35□□□□□ -1.55
CLDND1-208ENST00000503004 DKK3Q9UBP4 350 aa5.35□□□□□ -1.55
CLDND1-208ENST00000503004 SIX4Q9UIU6 781 aa5.35□□□□□ -1.55
CLDND1-208ENST00000503004 HAO1Q9UJM8 370 aa5.35□□□□□ -1.55
CLDND1-208ENST00000503004 AGTPBP1Q9UPW5 1226 aa5.35□□□□□ -1.55
CLDND1-208ENST00000503004 TSC22D4Q9Y3Q8 395 aa5.35□□□□□ -1.55
CLDND1-208ENST00000503004 USP15Q9Y4E8 981 aaPredicted RBP5.35□□□□□ -1.55
CLDND1-208ENST00000503004 LTBP3Q9NS15 1303 aa5.35□□□□□ -1.55
CLDND1-208ENST00000503004 HTTP42858 3142 aa5.35□□□□□ -1.55
CLDND1-208ENST00000503004 IGKV6-21A0A0C4DH24 114 aa5.35□□□□□ -1.55
CLDND1-208ENST00000503004 ACKR2O00590 384 aa5.35□□□□□ -1.55
CLDND1-208ENST00000503004 CNMDO75829 334 aa5.35□□□□□ -1.55
CLDND1-208ENST00000503004 FBXO21O94952 628 aa5.35□□□□□ -1.55
CLDND1-208ENST00000503004 MAP3K6O95382 1288 aa5.35□□□□□ -1.55
CLDND1-208ENST00000503004 S100BP04271 92 aaPredicted RBP5.35□□□□□ -1.55
CLDND1-208ENST00000503004 TXNP10599 105 aaKnown RBP5.35□□□□□ -1.55
CLDND1-208ENST00000503004 IL4RP24394 825 aa5.35□□□□□ -1.55
CLDND1-208ENST00000503004 EPHB2P29323 1055 aa5.35□□□□□ -1.55
CLDND1-208ENST00000503004 CETN2P41208 172 aa5.35□□□□□ -1.55
CLDND1-208ENST00000503004 TBL3Q12788 808 aaKnown RBP5.35□□□□□ -1.55
CLDND1-208ENST00000503004 PDIA2Q13087 525 aaKnown RBP5.35□□□□□ -1.55
CLDND1-208ENST00000503004 ARHGEF6Q15052 776 aa5.35□□□□□ -1.55
CLDND1-208ENST00000503004 CELF3Q5SZQ8 465 aaKnown RBP5.35□□□□□ -1.55
CLDND1-208ENST00000503004 ANKRD22Q5VYY1 191 aa5.35□□□□□ -1.55
CLDND1-208ENST00000503004 LRRC8BQ6P9F7 803 aa5.35□□□□□ -1.55
CLDND1-208ENST00000503004 KLHL35Q6PF15 583 aa5.35□□□□□ -1.55
CLDND1-208ENST00000503004 TRIM67Q6ZTA4 783 aa5.35□□□□□ -1.55
CLDND1-208ENST00000503004 C11orf74Q86VG3 221 aa5.35□□□□□ -1.55
CLDND1-208ENST00000503004 VSIG1Q86XK7 387 aa5.35□□□□□ -1.55
CLDND1-208ENST00000503004 SIX5Q8N196 739 aa5.35□□□□□ -1.55
CLDND1-208ENST00000503004 PPP1R13LQ8WUF5 828 aa5.35□□□□□ -1.55
CLDND1-208ENST00000503004 NRG4Q8WWG1 115 aa5.35□□□□□ -1.55
CLDND1-208ENST00000503004 GAB3Q8WWW8 586 aa5.35□□□□□ -1.55
CLDND1-208ENST00000503004 NMD3Q96D46 503 aaKnown RBP5.35□□□□□ -1.55
CLDND1-208ENST00000503004 CPB2Q96IY4 423 aa5.35□□□□□ -1.55
CLDND1-208ENST00000503004 PPP1R10Q96QC0 940 aaKnown RBP5.35□□□□□ -1.55
CLDND1-208ENST00000503004 TGS1Q96RS0 853 aaKnown RBP5.35□□□□□ -1.55
CLDND1-208ENST00000503004 MIS12Q9H081 205 aa5.35□□□□□ -1.55
CLDND1-208ENST00000503004 VPS37BQ9H9H4 285 aa5.35□□□□□ -1.55
CLDND1-208ENST00000503004 MRGBPQ9NV56 204 aa5.35□□□□□ -1.55
CLDND1-208ENST00000503004 TBCCD1Q9NVR7 557 aa5.35□□□□□ -1.55
CLDND1-208ENST00000503004 RBPJLQ9UBG7 517 aa5.35□□□□□ -1.55
CLDND1-208ENST00000503004 FADS3Q9Y5Q0 445 aa5.35□□□□□ -1.55
CLDND1-208ENST00000503004 MRPL42Q9Y6G3 142 aaKnown RBP5.35□□□□□ -1.55
CLDND1-208ENST00000503004 MGAMO43451 1857 aa5.35□□□□□ -1.55
CLDND1-208ENST00000503004 A0A087WZ62 844 aa5.34□□□□□ -1.55
CLDND1-208ENST00000503004 TCRBV7S3A2A0A539 114 aa5.34□□□□□ -1.55
CLDND1-208ENST00000503004 C3orf70A6NLC5 250 aaPredicted RBP5.34□□□□□ -1.55
CLDND1-208ENST00000503004 KDM1AO60341 852 aa5.34□□□□□ -1.55
CLDND1-208ENST00000503004 GRAP2O75791 330 aa5.34□□□□□ -1.55
CLDND1-208ENST00000503004 STK10O94804 968 aaKnown RBP5.34□□□□□ -1.55
CLDND1-208ENST00000503004 SUN1O94901 812 aa5.34□□□□□ -1.55
CLDND1-208ENST00000503004 LSM8O95777 96 aaKnown RBP5.34□□□□□ -1.55
CLDND1-208ENST00000503004 OAS1P00973 400 aaKnown RBP5.34□□□□□ -1.55
CLDND1-208ENST00000503004 TNNC2P02585 160 aa5.34□□□□□ -1.55
CLDND1-208ENST00000503004 VTNP04004 478 aa5.34□□□□□ -1.55
CLDND1-208ENST00000503004 ERBB2P04626 1255 aa5.34□□□□□ -1.55
CLDND1-208ENST00000503004 LYNP07948 512 aa5.34□□□□□ -1.55
CLDND1-208ENST00000503004 KRT15P19012 456 aa5.34□□□□□ -1.55
CLDND1-208ENST00000503004 PROZP22891 400 aa5.34□□□□□ -1.55
CLDND1-208ENST00000503004 ATP5DP30049 168 aa5.34□□□□□ -1.55
CLDND1-208ENST00000503004 SSTR1P30872 391 aa5.34□□□□□ -1.55
CLDND1-208ENST00000503004 AP3M2P53677 418 aa5.34□□□□□ -1.55
CLDND1-208ENST00000503004 VCPP55072 806 aaKnown RBP5.34□□□□□ -1.55
CLDND1-208ENST00000503004 WDR4P57081 412 aaKnown RBP5.34□□□□□ -1.55
CLDND1-208ENST00000503004 CTAG1AP78358 180 aa5.34□□□□□ -1.55
CLDND1-208ENST00000503004 SLC25A11Q02978 314 aaKnown RBP5.34□□□□□ -1.55
CLDND1-208ENST00000503004 RELAQ04206 551 aa5.34□□□□□ -1.55
CLDND1-208ENST00000503004 MBTD1Q05BQ5 628 aa5.34□□□□□ -1.55
CLDND1-208ENST00000503004 PIGHQ14442 188 aaPredicted RBP5.34□□□□□ -1.55
CLDND1-208ENST00000503004 KCTD2Q14681 263 aa5.34□□□□□ -1.55
CLDND1-208ENST00000503004 EFTUD2Q15029 972 aaKnown RBP eCLIP5.34□□□□□ -1.55
CLDND1-208ENST00000503004 PKN2Q16513 984 aaKnown RBP5.34□□□□□ -1.55
CLDND1-208ENST00000503004 CRY1Q16526 586 aa5.34□□□□□ -1.55
CLDND1-208ENST00000503004 CCDC153Q494R4 210 aa5.34□□□□□ -1.55
CLDND1-208ENST00000503004 MSS51Q4VC12 460 aa5.34□□□□□ -1.55
CLDND1-208ENST00000503004 ZNF667Q5HYK9 610 aa5.34□□□□□ -1.55
CLDND1-208ENST00000503004 RNASEH2BQ5TBB1 312 aaKnown RBP5.34□□□□□ -1.55
CLDND1-208ENST00000503004 JADE1Q6IE81 842 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms