RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 ATP11BQ9Y2G3 1177 aa22.85■■□□□ 1.25
PTPN13-205ENST00000502971 CFAP69A5D8W1 941 aa22.85■■□□□ 1.25
PTPN13-205ENST00000502971 OR6C75A6NL08 312 aa22.85■■□□□ 1.25
PTPN13-205ENST00000502971 FGFR3P22607 806 aa22.85■■□□□ 1.25
PTPN13-205ENST00000502971 CHKAP35790 457 aa22.85■■□□□ 1.25
PTPN13-205ENST00000502971 NR2C2P49116 596 aa22.85■■□□□ 1.25
PTPN13-205ENST00000502971 GDF10P55107 478 aa22.85■■□□□ 1.25
PTPN13-205ENST00000502971 TTMPQ5BVD1 217 aa22.85■■□□□ 1.25
PTPN13-205ENST00000502971 FAM171A1Q5VUB5 890 aa22.85■■□□□ 1.25
PTPN13-205ENST00000502971 CCDC25Q86WR0 208 aa22.85■■□□□ 1.25
PTPN13-205ENST00000502971 RELL1Q8IUW5 271 aa22.85■■□□□ 1.25
PTPN13-205ENST00000502971 UNC45BQ8IWX7 931 aa22.85■■□□□ 1.25
PTPN13-205ENST00000502971 ZCCHC9Q8N567 271 aaKnown RBP22.85■■□□□ 1.25
PTPN13-205ENST00000502971 FAM204AQ9H8W3 233 aa22.85■■□□□ 1.25
PTPN13-205ENST00000502971 TMBIM4Q9HC24 238 aa22.85■■□□□ 1.25
PTPN13-205ENST00000502971 CWC15Q9P013 229 aaKnown RBP22.85■■□□□ 1.25
PTPN13-205ENST00000502971 ADAM21Q9UKJ8 722 aa22.85■■□□□ 1.25
PTPN13-205ENST00000502971 SF3B1O75533 1304 aaKnown RBP eCLIP22.85■■□□□ 1.25
PTPN13-205ENST00000502971 PATJQ8NI35 1801 aa22.84■■□□□ 1.25
PTPN13-205ENST00000502971 TBKBP1A7MCY6 615 aa22.84■■□□□ 1.25
PTPN13-205ENST00000502971 H7C0C1 242 aa22.84■■□□□ 1.25
PTPN13-205ENST00000502971 CLTBP09497 229 aa22.84■■□□□ 1.25
PTPN13-205ENST00000502971 OR4Q2P0C623 313 aa22.84■■□□□ 1.25
PTPN13-205ENST00000502971 MYZAPP0CAP1 466 aa22.84■■□□□ 1.25
PTPN13-205ENST00000502971 ATP5OP48047 213 aa22.84■■□□□ 1.25
PTPN13-205ENST00000502971 IFFO1Q0D2I5 559 aa22.84■■□□□ 1.25
PTPN13-205ENST00000502971 TERF2Q15554 542 aa22.84■■□□□ 1.25
PTPN13-205ENST00000502971 CTXN3Q4LDR2 81 aa22.84■■□□□ 1.25
PTPN13-205ENST00000502971 EFHC2Q5JST6 749 aa22.84■■□□□ 1.25
PTPN13-205ENST00000502971 BSPRYQ5W0U4 402 aa22.84■■□□□ 1.25
PTPN13-205ENST00000502971 ZNF280DQ6N043 979 aa22.84■■□□□ 1.25
PTPN13-205ENST00000502971 VSTM1Q6UX27 236 aa22.84■■□□□ 1.25
PTPN13-205ENST00000502971 LRRC43Q8N309 656 aa22.84■■□□□ 1.25
PTPN13-205ENST00000502971 OR2W6PQ8NHA6 318 aa22.84■■□□□ 1.25
PTPN13-205ENST00000502971 TBX21Q9UL17 535 aa22.84■■□□□ 1.25
PTPN13-205ENST00000502971 COL4A4P53420 1690 aaPredicted RBP22.84■■□□□ 1.25
PTPN13-205ENST00000502971 SCN5AQ14524 2016 aa22.84■■□□□ 1.25
PTPN13-205ENST00000502971 SYNJ2BP-COX16A0A087WUM0 186 aa22.83■■□□□ 1.25
PTPN13-205ENST00000502971 H3BRJ5 948 aa22.83■■□□□ 1.25
PTPN13-205ENST00000502971 TNFRSF10BO14763 440 aa22.83■■□□□ 1.25
PTPN13-205ENST00000502971 RIPK2O43353 540 aa22.83■■□□□ 1.25
PTPN13-205ENST00000502971 GALTP07902 379 aa22.83■■□□□ 1.25
PTPN13-205ENST00000502971 EN2P19622 333 aaPredicted RBP22.83■■□□□ 1.25
PTPN13-205ENST00000502971 SCAPQ12770 1279 aa22.83■■□□□ 1.25
PTPN13-205ENST00000502971 XRCC4Q13426 336 aa22.83■■□□□ 1.25
PTPN13-205ENST00000502971 LRRC26Q2I0M4 334 aa22.83■■□□□ 1.25
PTPN13-205ENST00000502971 RNASEH2BQ5TBB1 312 aaKnown RBP22.83■■□□□ 1.25
PTPN13-205ENST00000502971 DEFB128Q7Z7B8 93 aa22.83■■□□□ 1.25
PTPN13-205ENST00000502971 ZC3H18Q86VM9 953 aaKnown RBP22.83■■□□□ 1.25
PTPN13-205ENST00000502971 CEP57Q86XR8 500 aa22.83■■□□□ 1.25
PTPN13-205ENST00000502971 C10orf88Q9H8K7 445 aa22.83■■□□□ 1.25
PTPN13-205ENST00000502971 WDR6Q9NNW5 1121 aaKnown RBP22.83■■□□□ 1.25
PTPN13-205ENST00000502971 COX16Q9P0S2 106 aa22.83■■□□□ 1.25
PTPN13-205ENST00000502971 SHOC2Q9UQ13 582 aa22.83■■□□□ 1.25
PTPN13-205ENST00000502971 HEY1Q9Y5J3 304 aa22.83■■□□□ 1.25
PTPN13-205ENST00000502971 TET1Q8NFU7 2136 aa22.83■■□□□ 1.25
PTPN13-205ENST00000502971 BCLAF3A2AJT9 711 aaKnown RBP22.82■■□□□ 1.24
PTPN13-205ENST00000502971 HMGB1P1B2RPK0 211 aaPredicted RBP22.82■■□□□ 1.24
PTPN13-205ENST00000502971 SMAPO00193 183 aa22.82■■□□□ 1.24
PTPN13-205ENST00000502971 RFC2P35250 354 aa22.82■■□□□ 1.24
PTPN13-205ENST00000502971 RPL22P35268 128 aaKnown RBP22.82■■□□□ 1.24
PTPN13-205ENST00000502971 ADRA1BP35368 520 aa22.82■■□□□ 1.24
PTPN13-205ENST00000502971 SLC5A3P53794 718 aa22.82■■□□□ 1.24
PTPN13-205ENST00000502971 GYS2P54840 703 aa22.82■■□□□ 1.24
PTPN13-205ENST00000502971 SLC29A2Q14542 456 aa22.82■■□□□ 1.24
PTPN13-205ENST00000502971 ARL13BQ3SXY8 428 aa22.82■■□□□ 1.24
PTPN13-205ENST00000502971 FUT10Q6P4F1 479 aa22.82■■□□□ 1.24
PTPN13-205ENST00000502971 CNKSR3Q6P9H4 555 aa22.82■■□□□ 1.24
PTPN13-205ENST00000502971 CROCCP2Q86T23 111 aa22.82■■□□□ 1.24
PTPN13-205ENST00000502971 FAM71DQ8N9W8 422 aa22.82■■□□□ 1.24
PTPN13-205ENST00000502971 FAM76AQ8TAV0 307 aa22.82■■□□□ 1.24
PTPN13-205ENST00000502971 EXOC4Q96A65 974 aa22.82■■□□□ 1.24
PTPN13-205ENST00000502971 C8orf48Q96LL4 319 aa22.82■■□□□ 1.24
PTPN13-205ENST00000502971 OXCT2Q9BYC2 517 aaPredicted RBP22.82■■□□□ 1.24
PTPN13-205ENST00000502971 GPR62Q9BZJ7 368 aa22.82■■□□□ 1.24
PTPN13-205ENST00000502971 CDC42EP4Q9H3Q1 356 aaKnown RBP22.82■■□□□ 1.24
PTPN13-205ENST00000502971 TMEM39AQ9NV64 488 aa22.82■■□□□ 1.24
PTPN13-205ENST00000502971 DDIT4Q9NX09 232 aa22.82■■□□□ 1.24
PTPN13-205ENST00000502971 ABI2Q9NYB9 513 aaPredicted RBP22.82■■□□□ 1.24
PTPN13-205ENST00000502971 FBXW11Q9UKB1 542 aa22.82■■□□□ 1.24
PTPN13-205ENST00000502971 PCDHB5Q9Y5E4 795 aa22.82■■□□□ 1.24
PTPN13-205ENST00000502971 TRIM66O15016 1216 aa22.82■■□□□ 1.24
PTPN13-205ENST00000502971 GOT1P17174 413 aa22.82■■□□□ 1.24
PTPN13-205ENST00000502971 MAGEA11P43364 429 aa22.82■■□□□ 1.24
PTPN13-205ENST00000502971 IKBKEQ14164 716 aa22.82■■□□□ 1.24
PTPN13-205ENST00000502971 PYROXD2Q8N2H3 581 aa22.82■■□□□ 1.24
PTPN13-205ENST00000502971 EDEM1Q92611 657 aa22.82■■□□□ 1.24
PTPN13-205ENST00000502971 RTP4Q96DX8 246 aa22.82■■□□□ 1.24
PTPN13-205ENST00000502971 ATP6V1G3Q96LB4 118 aa22.82■■□□□ 1.24
PTPN13-205ENST00000502971 MAGEB5Q9BZ81 275 aa22.82■■□□□ 1.24
PTPN13-205ENST00000502971 FARP1Q9Y4F1 1045 aaPredicted RBP22.82■■□□□ 1.24
PTPN13-205ENST00000502971 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP22.81■■□□□ 1.24
PTPN13-205ENST00000502971 BZW1Q7L1Q6 419 aaKnown RBP22.81■■□□□ 1.24
PTPN13-205ENST00000502971 HOOK3Q86VS8 718 aa22.81■■□□□ 1.24
PTPN13-205ENST00000502971 CDKL3Q8IVW4 592 aaPredicted RBP22.81■■□□□ 1.24
PTPN13-205ENST00000502971 SCN4BQ8IWT1 228 aa22.81■■□□□ 1.24
PTPN13-205ENST00000502971 PPIL6Q8IXY8 311 aa22.81■■□□□ 1.24
PTPN13-205ENST00000502971 SCAMP5Q8TAC9 235 aa22.81■■□□□ 1.24
PTPN13-205ENST00000502971 RNF139Q8WU17 664 aa22.81■■□□□ 1.24
PTPN13-205ENST00000502971 USP29Q9HBJ7 922 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms