RNA–Protein interactions for RNA: ENST00000498722.2

LMNA-217, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 1,348 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-217ENST00000498722 MNS1Q8NEH6 495 aa16.91■□□□□ 0.3
LMNA-217ENST00000498722 TTC8Q8TAM2 541 aa16.91■□□□□ 0.3
LMNA-217ENST00000498722 DDX1Q92499 740 aaKnown RBP16.91■□□□□ 0.3
LMNA-217ENST00000498722 LRFN3Q9BTN0 628 aa16.91■□□□□ 0.3
LMNA-217ENST00000498722 ULBP1Q9BZM6 244 aa16.91■□□□□ 0.3
LMNA-217ENST00000498722 PDCL3Q9H2J4 239 aa16.91■□□□□ 0.3
LMNA-217ENST00000498722 HEBP1Q9NRV9 189 aa16.91■□□□□ 0.3
LMNA-217ENST00000498722 ARHGAP26Q9UNA1 814 aa16.91■□□□□ 0.3
LMNA-217ENST00000498722 CPQQ9Y646 472 aa16.91■□□□□ 0.3
LMNA-217ENST00000498722 ATG2BQ96BY7 2078 aa16.9■□□□□ 0.3
LMNA-217ENST00000498722 KRBA1A5PL33 1030 aa16.9■□□□□ 0.3
LMNA-217ENST00000498722 TMCO5BA8MYB1 307 aa16.9■□□□□ 0.3
LMNA-217ENST00000498722 ZDHHC11BP0C7U3 371 aa16.9■□□□□ 0.3
LMNA-217ENST00000498722 RALAP11233 206 aa16.9■□□□□ 0.3
LMNA-217ENST00000498722 RARGP13631 454 aa16.9■□□□□ 0.3
LMNA-217ENST00000498722 PSEN1P49768 467 aa16.9■□□□□ 0.3
LMNA-217ENST00000498722 MLF2Q15773 248 aaPredicted RBP16.9■□□□□ 0.3
LMNA-217ENST00000498722 WHAMMP3Q1A5X7 153 aa16.9■□□□□ 0.3
LMNA-217ENST00000498722 PKDCCQ504Y2 493 aa16.9■□□□□ 0.3
LMNA-217ENST00000498722 SLC44A4Q53GD3 710 aa16.9■□□□□ 0.3
LMNA-217ENST00000498722 RAB41Q5JT25 222 aa16.9■□□□□ 0.3
LMNA-217ENST00000498722 C10orf120Q5SQS8 335 aa16.9■□□□□ 0.3
LMNA-217ENST00000498722 SNX30Q5VWJ9 437 aa16.9■□□□□ 0.3
LMNA-217ENST00000498722 PMF1Q6P1K2 205 aa16.9■□□□□ 0.3
LMNA-217ENST00000498722 RSRC2Q7L4I2 434 aaKnown RBP16.9■□□□□ 0.3
LMNA-217ENST00000498722 PASD1Q8IV76 773 aa16.9■□□□□ 0.3
LMNA-217ENST00000498722 SYCE1Q8N0S2 351 aa16.9■□□□□ 0.3
LMNA-217ENST00000498722 ARHGAP18Q8N392 663 aa16.9■□□□□ 0.3
LMNA-217ENST00000498722 CEP112Q8N8E3 955 aa16.9■□□□□ 0.3
LMNA-217ENST00000498722 RFFLQ8WZ73 363 aa16.9■□□□□ 0.3
LMNA-217ENST00000498722 DNASE1L2Q92874 299 aa16.9■□□□□ 0.3
LMNA-217ENST00000498722 SHDQ96IW2 340 aa16.9■□□□□ 0.3
LMNA-217ENST00000498722 NMUR1Q9HB89 426 aa16.9■□□□□ 0.3
LMNA-217ENST00000498722 GKN1Q9NS71 199 aa16.9■□□□□ 0.3
LMNA-217ENST00000498722 SALL4Q9UJQ4 1053 aa16.9■□□□□ 0.3
LMNA-217ENST00000498722 NUDT5Q9UKK9 219 aa16.9■□□□□ 0.3
LMNA-217ENST00000498722 SAR1BQ9Y6B6 198 aa16.9■□□□□ 0.3
LMNA-217ENST00000498722 USP3Q9Y6I4 520 aa16.9■□□□□ 0.3
LMNA-217ENST00000498722 LEFTY2O00292 366 aa16.89■□□□□ 0.29
LMNA-217ENST00000498722 SCAMP3O14828 347 aaKnown RBP16.89■□□□□ 0.29
LMNA-217ENST00000498722 CTIFO43310 598 aaKnown RBP16.89■□□□□ 0.29
LMNA-217ENST00000498722 FTLP02792 175 aaPredicted RBP16.89■□□□□ 0.29
LMNA-217ENST00000498722 IRF1P10914 325 aa16.89■□□□□ 0.29
LMNA-217ENST00000498722 PRLRP16471 622 aa16.89■□□□□ 0.29
LMNA-217ENST00000498722 ATP5C1P36542 298 aaKnown RBP16.89■□□□□ 0.29
LMNA-217ENST00000498722 IFNAR2P48551 515 aa16.89■□□□□ 0.29
LMNA-217ENST00000498722 KPNA1P52294 538 aaPredicted RBP16.89■□□□□ 0.29
LMNA-217ENST00000498722 YWHAGP61981 247 aaKnown RBP eCLIP16.89■□□□□ 0.29
LMNA-217ENST00000498722 SLC7A9P82251 487 aa16.89■□□□□ 0.29
LMNA-217ENST00000498722 AMPD2Q01433 879 aa16.89■□□□□ 0.29
LMNA-217ENST00000498722 USP4Q13107 963 aa16.89■□□□□ 0.29
LMNA-217ENST00000498722 TCEAL1Q15170 157 aa16.89■□□□□ 0.29
LMNA-217ENST00000498722 ZNF77Q15935 545 aa16.89■□□□□ 0.29
LMNA-217ENST00000498722 CLEC16AQ2KHT3 1053 aa16.89■□□□□ 0.29
LMNA-217ENST00000498722 IER5LQ5T953 404 aa16.89■□□□□ 0.29
LMNA-217ENST00000498722 ACAD10Q6JQN1 1059 aa16.89■□□□□ 0.29
LMNA-217ENST00000498722 TPRG1Q6ZUI0 275 aa16.89■□□□□ 0.29
LMNA-217ENST00000498722 TADA2BQ86TJ2 420 aa16.89■□□□□ 0.29
LMNA-217ENST00000498722 DDX42Q86XP3 938 aaKnown RBP eCLIP16.89■□□□□ 0.29
LMNA-217ENST00000498722 FBXL6Q8N531 539 aa16.89■□□□□ 0.29
LMNA-217ENST00000498722 SLC35F5Q8WV83 523 aa16.89■□□□□ 0.29
LMNA-217ENST00000498722 KCTD13Q8WZ19 329 aa16.89■□□□□ 0.29
LMNA-217ENST00000498722 NDRG1Q92597 394 aaKnown RBP16.89■□□□□ 0.29
LMNA-217ENST00000498722 TRIM11Q96F44 468 aa16.89■□□□□ 0.29
LMNA-217ENST00000498722 PCDHB18PQ96TA0 734 aa16.89■□□□□ 0.29
LMNA-217ENST00000498722 MIS12Q9H081 205 aa16.89■□□□□ 0.29
LMNA-217ENST00000498722 EBF3Q9H4W6 596 aa16.89■□□□□ 0.29
LMNA-217ENST00000498722 TBC1D17Q9HA65 648 aa16.89■□□□□ 0.29
LMNA-217ENST00000498722 OSER1Q9NX31 292 aa16.89■□□□□ 0.29
LMNA-217ENST00000498722 DUS2Q9NX74 493 aaKnown RBP16.89■□□□□ 0.29
LMNA-217ENST00000498722 CFAP97Q9P2B7 532 aa16.89■□□□□ 0.29
LMNA-217ENST00000498722 F5P12259 2224 aa16.88■□□□□ 0.29
LMNA-217ENST00000498722 DYNC1I1O14576 645 aa16.88■□□□□ 0.29
LMNA-217ENST00000498722 PALMO75781 387 aa16.88■□□□□ 0.29
LMNA-217ENST00000498722 OLFM2O95897 454 aa16.88■□□□□ 0.29
LMNA-217ENST00000498722 TBX18O95935 607 aa16.88■□□□□ 0.29
LMNA-217ENST00000498722 ATP1A1P05023 1023 aaKnown RBP16.88■□□□□ 0.29
LMNA-217ENST00000498722 TNK2Q07912 1038 aa16.88■□□□□ 0.29
LMNA-217ENST00000498722 BTBD8Q5XKL5 378 aa16.88■□□□□ 0.29
LMNA-217ENST00000498722 TRIM68Q6AZZ1 485 aa16.88■□□□□ 0.29
LMNA-217ENST00000498722 SCD5Q86SK9 330 aa16.88■□□□□ 0.29
LMNA-217ENST00000498722 RIN3Q8TB24 985 aa16.88■□□□□ 0.29
LMNA-217ENST00000498722 UBE2Q2Q8WVN8 375 aa16.88■□□□□ 0.29
LMNA-217ENST00000498722 CYLDQ9NQC7 956 aa16.88■□□□□ 0.29
LMNA-217ENST00000498722 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.88■□□□□ 0.29
LMNA-217ENST00000498722 TAS2R14Q9NYV8 317 aa16.88■□□□□ 0.29
LMNA-217ENST00000498722 GTSE1Q9NYZ3 720 aa16.88■□□□□ 0.29
LMNA-217ENST00000498722 SH3BP1Q9Y3L3 701 aa16.88■□□□□ 0.29
LMNA-217ENST00000498722 CEP83Q9Y592 693 aa16.88■□□□□ 0.29
LMNA-217ENST00000498722 WNT6Q9Y6F9 365 aa16.88■□□□□ 0.29
LMNA-217ENST00000498722 PIAS3Q9Y6X2 628 aa16.88■□□□□ 0.29
LMNA-217ENST00000498722 ZNF318Q5VUA4 2279 aa16.87■□□□□ 0.29
LMNA-217ENST00000498722 ENC1O14682 589 aa16.87■□□□□ 0.29
LMNA-217ENST00000498722 MDM4O15151 490 aa16.87■□□□□ 0.29
LMNA-217ENST00000498722 MYBL1P10243 752 aa16.87■□□□□ 0.29
LMNA-217ENST00000498722 TCP1P17987 556 aaKnown RBP16.87■□□□□ 0.29
LMNA-217ENST00000498722 ABCB4P21439 1286 aa16.87■□□□□ 0.29
LMNA-217ENST00000498722 CD72P21854 359 aa16.87■□□□□ 0.29
LMNA-217ENST00000498722 GPD2P43304 727 aa16.87■□□□□ 0.29
LMNA-217ENST00000498722 HADHBP55084 474 aaKnown RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms