RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 APOBEC2Q9Y235 224 aaKnown RBP15.49■□□□□ 0.07
TRAF4-212ENST00000498540 SPTLC2O15270 562 aa15.48■□□□□ 0.07
TRAF4-212ENST00000498540 STC2O76061 302 aa15.48■□□□□ 0.07
TRAF4-212ENST00000498540 FAM200BP0CF97 657 aa15.48■□□□□ 0.07
TRAF4-212ENST00000498540 RARGP13631 454 aa15.48■□□□□ 0.07
TRAF4-212ENST00000498540 ACO1P21399 889 aaKnown RBP15.48■□□□□ 0.07
TRAF4-212ENST00000498540 IL12RB1P42701 662 aa15.48■□□□□ 0.07
TRAF4-212ENST00000498540 MFAP3P55082 362 aa15.48■□□□□ 0.07
TRAF4-212ENST00000498540 DLG4P78352 724 aa15.48■□□□□ 0.07
TRAF4-212ENST00000498540 BNC1Q01954 994 aa15.48■□□□□ 0.07
TRAF4-212ENST00000498540 STARD3Q14849 445 aa15.48■□□□□ 0.07
TRAF4-212ENST00000498540 GEN1Q17RS7 908 aa15.48■□□□□ 0.07
TRAF4-212ENST00000498540 KNOP1Q1ED39 458 aaKnown RBP15.48■□□□□ 0.07
TRAF4-212ENST00000498540 C10orf120Q5SQS8 335 aa15.48■□□□□ 0.07
TRAF4-212ENST00000498540 DCAF12L1Q5VU92 463 aa15.48■□□□□ 0.07
TRAF4-212ENST00000498540 SPOPLQ6IQ16 392 aa15.48■□□□□ 0.07
TRAF4-212ENST00000498540 SHC4Q6S5L8 630 aa15.48■□□□□ 0.07
TRAF4-212ENST00000498540 METTL3Q86U44 580 aaKnown RBP15.48■□□□□ 0.07
TRAF4-212ENST00000498540 CACUL1Q86Y37 369 aa15.48■□□□□ 0.07
TRAF4-212ENST00000498540 IQUBQ8NA54 791 aa15.48■□□□□ 0.07
TRAF4-212ENST00000498540 SETD7Q8WTS6 366 aaKnown RBP15.48■□□□□ 0.07
TRAF4-212ENST00000498540 TWNKQ96RR1 684 aa15.48■□□□□ 0.07
TRAF4-212ENST00000498540 GAREM1Q9H706 876 aa15.48■□□□□ 0.07
TRAF4-212ENST00000498540 ITM2CQ9NQX7 267 aa15.48■□□□□ 0.07
TRAF4-212ENST00000498540 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.48■□□□□ 0.07
TRAF4-212ENST00000498540 CGNQ9P2M7 1197 aaKnown RBP15.48■□□□□ 0.07
TRAF4-212ENST00000498540 TFIP11Q9UBB9 837 aaKnown RBP15.48■□□□□ 0.07
TRAF4-212ENST00000498540 DNMT3LQ9UJW3 386 aa15.48■□□□□ 0.07
TRAF4-212ENST00000498540 FNDC3AQ9Y2H6 1198 aaKnown RBP15.48■□□□□ 0.07
TRAF4-212ENST00000498540 NFE2L3Q9Y4A8 694 aa15.48■□□□□ 0.07
TRAF4-212ENST00000498540 TMEM131Q92545 1883 aa15.48■□□□□ 0.07
TRAF4-212ENST00000498540 GCN1Q92616 2671 aaKnown RBP15.47■□□□□ 0.07
TRAF4-212ENST00000498540 CILPO75339 1184 aa15.47■□□□□ 0.07
TRAF4-212ENST00000498540 PENKP01210 267 aaPredicted RBP15.47■□□□□ 0.07
TRAF4-212ENST00000498540 KLKB1P03952 638 aa15.47■□□□□ 0.07
TRAF4-212ENST00000498540 ASPAP45381 313 aa15.47■□□□□ 0.07
TRAF4-212ENST00000498540 PLA2G4AP47712 749 aa15.47■□□□□ 0.07
TRAF4-212ENST00000498540 TPMTP51580 245 aa15.47■□□□□ 0.07
TRAF4-212ENST00000498540 AP3M2P53677 418 aa15.47■□□□□ 0.07
TRAF4-212ENST00000498540 ENPP2Q13822 863 aa15.47■□□□□ 0.07
TRAF4-212ENST00000498540 FYB2Q5VWT5 728 aa15.47■□□□□ 0.07
TRAF4-212ENST00000498540 KLHDC10Q6PID8 442 aa15.47■□□□□ 0.07
TRAF4-212ENST00000498540 CADM4Q8NFZ8 388 aa15.47■□□□□ 0.07
TRAF4-212ENST00000498540 BAHD1Q8TBE0 780 aaPredicted RBP15.47■□□□□ 0.07
TRAF4-212ENST00000498540 TOR4AQ9NXH8 423 aa15.47■□□□□ 0.07
TRAF4-212ENST00000498540 THAP10Q9P2Z0 257 aaPredicted RBP15.47■□□□□ 0.07
TRAF4-212ENST00000498540 SLC27A6Q9Y2P4 619 aa15.47■□□□□ 0.07
TRAF4-212ENST00000498540 RAXQ9Y2V3 346 aa15.47■□□□□ 0.07
TRAF4-212ENST00000498540 SMG1Q96Q15 3661 aaKnown RBP15.47■□□□□ 0.07
TRAF4-212ENST00000498540 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.46■□□□□ 0.07
TRAF4-212ENST00000498540 BCAT2O15382 392 aaPredicted RBP15.46■□□□□ 0.07
TRAF4-212ENST00000498540 PPP6R2O75170 966 aa15.46■□□□□ 0.07
TRAF4-212ENST00000498540 CER1O95813 267 aa15.46■□□□□ 0.07
TRAF4-212ENST00000498540 ZNF883P0CG24 379 aa15.46■□□□□ 0.07
TRAF4-212ENST00000498540 P4HA1P13674 534 aa15.46■□□□□ 0.07
TRAF4-212ENST00000498540 MATKP42679 507 aa15.46■□□□□ 0.07
TRAF4-212ENST00000498540 SGSM1Q2NKQ1 1148 aa15.46■□□□□ 0.07
TRAF4-212ENST00000498540 ZACNQ401N2 412 aa15.46■□□□□ 0.07
TRAF4-212ENST00000498540 SCD5Q86SK9 330 aa15.46■□□□□ 0.07
TRAF4-212ENST00000498540 UNC93AQ86WB7 457 aa15.46■□□□□ 0.07
TRAF4-212ENST00000498540 MARCH9Q86YJ5 346 aa15.46■□□□□ 0.07
TRAF4-212ENST00000498540 TMPRSS6Q8IU80 811 aa15.46■□□□□ 0.07
TRAF4-212ENST00000498540 HNRNPLLQ8WVV9 542 aaKnown RBP15.46■□□□□ 0.07
TRAF4-212ENST00000498540 HNRNPABQ99729 332 aaKnown RBP15.46■□□□□ 0.07
TRAF4-212ENST00000498540 ZSCAN16Q9H4T2 348 aaPredicted RBP15.46■□□□□ 0.07
TRAF4-212ENST00000498540 TM7SF3Q9NS93 570 aa15.46■□□□□ 0.07
TRAF4-212ENST00000498540 FOXD4L1Q9NU39 408 aa15.46■□□□□ 0.07
TRAF4-212ENST00000498540 EIF2B4Q9UI10 523 aaKnown RBP15.46■□□□□ 0.07
TRAF4-212ENST00000498540 NAGPAQ9UK23 515 aa15.46■□□□□ 0.07
TRAF4-212ENST00000498540 PCDHA5Q9Y5H7 936 aa15.46■□□□□ 0.07
TRAF4-212ENST00000498540 SLCO1B1Q9Y6L6 691 aa15.46■□□□□ 0.07
TRAF4-212ENST00000498540 NUMA1Q14980 2115 aa15.46■□□□□ 0.06
TRAF4-212ENST00000498540 MUC22E2RYF6 1773 aaPredicted RBP15.45■□□□□ 0.06
TRAF4-212ENST00000498540 METTL12A8MUP2 240 aa15.45■□□□□ 0.06
TRAF4-212ENST00000498540 POLR2DO15514 142 aaKnown RBP15.45■□□□□ 0.06
TRAF4-212ENST00000498540 ASS1P00966 412 aaKnown RBP15.45■□□□□ 0.06
TRAF4-212ENST00000498540 IGLV3-19P01714 112 aa15.45■□□□□ 0.06
TRAF4-212ENST00000498540 ATXN1LP0C7T5 689 aaKnown RBP15.45■□□□□ 0.06
TRAF4-212ENST00000498540 PRKCHP24723 683 aa15.45■□□□□ 0.06
TRAF4-212ENST00000498540 KIF11P52732 1056 aa15.45■□□□□ 0.06
TRAF4-212ENST00000498540 COPAP53621 1224 aa15.45■□□□□ 0.06
TRAF4-212ENST00000498540 CUL4BQ13620 913 aa15.45■□□□□ 0.06
TRAF4-212ENST00000498540 ZNF234Q14588 700 aa15.45■□□□□ 0.06
TRAF4-212ENST00000498540 HLA-BQ31612 363 aa15.45■□□□□ 0.06
TRAF4-212ENST00000498540 C1orf216Q8TAB5 229 aa15.45■□□□□ 0.06
TRAF4-212ENST00000498540 SORCS1Q8WY21 1168 aa15.45■□□□□ 0.06
TRAF4-212ENST00000498540 CYFIP2Q96F07 1278 aa15.45■□□□□ 0.06
TRAF4-212ENST00000498540 SIPA1Q96FS4 1042 aa15.45■□□□□ 0.06
TRAF4-212ENST00000498540 PIWIL1Q96J94 861 aaKnown RBP15.45■□□□□ 0.06
TRAF4-212ENST00000498540 BBC3Q96PG8 261 aaPredicted RBP15.45■□□□□ 0.06
TRAF4-212ENST00000498540 MAGEF1Q9HAY2 307 aa15.45■□□□□ 0.06
TRAF4-212ENST00000498540 PNPLA8Q9NP80 782 aa15.45■□□□□ 0.06
TRAF4-212ENST00000498540 DMAC2Q9NW81 257 aa15.45■□□□□ 0.06
TRAF4-212ENST00000498540 KIAA1522Q9P206 1035 aaPredicted RBP15.45■□□□□ 0.06
TRAF4-212ENST00000498540 CLEC4EQ9ULY5 219 aa15.45■□□□□ 0.06
TRAF4-212ENST00000498540 A0A1B0GVT2 93 aa15.44■□□□□ 0.06
TRAF4-212ENST00000498540 PVALEFA0A1B0GWK0 134 aa15.44■□□□□ 0.06
TRAF4-212ENST00000498540 NPC1O15118 1278 aa15.44■□□□□ 0.06
TRAF4-212ENST00000498540 STX6O43752 255 aa15.44■□□□□ 0.06
TRAF4-212ENST00000498540 SYNCRIPO60506 623 aaKnown RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 120.4 ms