RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 WDR49Q8IV35 697 aa17.39■□□□□ 0.37
VIM-208ENST00000497849 ZMIZ2Q8NF64 920 aa17.39■□□□□ 0.37
VIM-208ENST00000497849 SNX19Q92543 992 aa17.39■□□□□ 0.37
VIM-208ENST00000497849 IGSF8Q969P0 613 aa17.39■□□□□ 0.37
VIM-208ENST00000497849 PCED1AQ9H1Q7 454 aa17.39■□□□□ 0.37
VIM-208ENST00000497849 TM9SF3Q9HD45 589 aa17.39■□□□□ 0.37
VIM-208ENST00000497849 OSGEPQ9NPF4 335 aa17.39■□□□□ 0.37
VIM-208ENST00000497849 COMMD8Q9NX08 183 aa17.39■□□□□ 0.37
VIM-208ENST00000497849 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.39■□□□□ 0.37
VIM-208ENST00000497849 TEX51A0A1B0GUA7 166 aa17.38■□□□□ 0.37
VIM-208ENST00000497849 ZNF233A6NK53 670 aa17.38■□□□□ 0.37
VIM-208ENST00000497849 NPC1O15118 1278 aa17.38■□□□□ 0.37
VIM-208ENST00000497849 PRPF6O94906 941 aaKnown RBP17.38■□□□□ 0.37
VIM-208ENST00000497849 ACSL1P33121 698 aa17.38■□□□□ 0.37
VIM-208ENST00000497849 GRIA4P48058 902 aa17.38■□□□□ 0.37
VIM-208ENST00000497849 MFAP3P55082 362 aa17.38■□□□□ 0.37
VIM-208ENST00000497849 IL9RQ01113 521 aa17.38■□□□□ 0.37
VIM-208ENST00000497849 SURF1Q15526 300 aa17.38■□□□□ 0.37
VIM-208ENST00000497849 C6orf118Q5T5N4 469 aa17.38■□□□□ 0.37
VIM-208ENST00000497849 Q6ZNB5 142 aa17.38■□□□□ 0.37
VIM-208ENST00000497849 GPR155Q7Z3F1 870 aa17.38■□□□□ 0.37
VIM-208ENST00000497849 EPSTI1Q96J88 318 aa17.38■□□□□ 0.37
VIM-208ENST00000497849 TMX3Q96JJ7 454 aa17.38■□□□□ 0.37
VIM-208ENST00000497849 DMAP1Q9NPF5 467 aaPredicted RBP17.38■□□□□ 0.37
VIM-208ENST00000497849 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.38■□□□□ 0.37
VIM-208ENST00000497849 OSER1Q9NX31 292 aa17.38■□□□□ 0.37
VIM-208ENST00000497849 FTSJ1Q9UET6 329 aa17.38■□□□□ 0.37
VIM-208ENST00000497849 LSM7Q9UK45 103 aaKnown RBP17.38■□□□□ 0.37
VIM-208ENST00000497849 PCDHGA1Q9Y5H4 931 aa17.38■□□□□ 0.37
VIM-208ENST00000497849 SPTA1P02549 2419 aa17.37■□□□□ 0.37
VIM-208ENST00000497849 KIAA0391O15091 583 aaKnown RBP17.37■□□□□ 0.37
VIM-208ENST00000497849 RRP8O43159 456 aaKnown RBP17.37■□□□□ 0.37
VIM-208ENST00000497849 PAPSS1O43252 624 aaPredicted RBP17.37■□□□□ 0.37
VIM-208ENST00000497849 SYNCRIPO60506 623 aaKnown RBP17.37■□□□□ 0.37
VIM-208ENST00000497849 BEST1O76090 585 aa17.37■□□□□ 0.37
VIM-208ENST00000497849 ACADMP11310 421 aa17.37■□□□□ 0.37
VIM-208ENST00000497849 JUPP14923 745 aa17.37■□□□□ 0.37
VIM-208ENST00000497849 PRKCHP24723 683 aa17.37■□□□□ 0.37
VIM-208ENST00000497849 CTSKP43235 329 aa17.37■□□□□ 0.37
VIM-208ENST00000497849 TNNC1P63316 161 aa17.37■□□□□ 0.37
VIM-208ENST00000497849 ZNF234Q14588 700 aa17.37■□□□□ 0.37
VIM-208ENST00000497849 TEAD4Q15561 434 aa17.37■□□□□ 0.37
VIM-208ENST00000497849 RBBP8NLQ8NC74 664 aaPredicted RBP17.37■□□□□ 0.37
VIM-208ENST00000497849 ENGASEQ8NFI3 743 aa17.37■□□□□ 0.37
VIM-208ENST00000497849 SNIP1Q8TAD8 396 aaKnown RBP17.37■□□□□ 0.37
VIM-208ENST00000497849 CYLDQ9NQC7 956 aa17.37■□□□□ 0.37
VIM-208ENST00000497849 AK5Q9Y6K8 562 aa17.37■□□□□ 0.37
VIM-208ENST00000497849 FRMD3A2A2Y4 597 aa17.36■□□□□ 0.37
VIM-208ENST00000497849 CBX4O00257 560 aa17.36■□□□□ 0.37
VIM-208ENST00000497849 MDM4O15151 490 aa17.36■□□□□ 0.37
VIM-208ENST00000497849 PENKP01210 267 aaPredicted RBP17.36■□□□□ 0.37
VIM-208ENST00000497849 ATP5C1P36542 298 aaKnown RBP17.36■□□□□ 0.37
VIM-208ENST00000497849 CDH8P55286 799 aa17.36■□□□□ 0.37
VIM-208ENST00000497849 TARDBPQ13148 414 aaKnown RBP eCLIP17.36■□□□□ 0.37
VIM-208ENST00000497849 ALCAMQ13740 583 aa17.36■□□□□ 0.37
VIM-208ENST00000497849 RTP5Q14D33 572 aa17.36■□□□□ 0.37
VIM-208ENST00000497849 FYB2Q5VWT5 728 aa17.36■□□□□ 0.37
VIM-208ENST00000497849 FUKQ8N0W3 1084 aa17.36■□□□□ 0.37
VIM-208ENST00000497849 SMARCD1Q96GM5 515 aa17.36■□□□□ 0.37
VIM-208ENST00000497849 SMOQ99835 787 aa17.36■□□□□ 0.37
VIM-208ENST00000497849 MED10Q9BTT4 135 aa17.36■□□□□ 0.37
VIM-208ENST00000497849 TLR8Q9NR97 1041 aaKnown RBP17.36■□□□□ 0.37
VIM-208ENST00000497849 STK17AQ9UEE5 414 aa17.36■□□□□ 0.37
VIM-208ENST00000497849 AP1G2O75843 785 aa17.35■□□□□ 0.37
VIM-208ENST00000497849 STAU1O95793 577 aaKnown RBP17.35■□□□□ 0.37
VIM-208ENST00000497849 HNF1BP35680 557 aa17.35■□□□□ 0.37
VIM-208ENST00000497849 GOLGA8FQ08AF8 430 aa17.35■□□□□ 0.37
VIM-208ENST00000497849 GOLGA8DPQ0D2H9 430 aa17.35■□□□□ 0.37
VIM-208ENST00000497849 DNAJC3Q13217 504 aa17.35■□□□□ 0.37
VIM-208ENST00000497849 ORC1Q13415 861 aa17.35■□□□□ 0.37
VIM-208ENST00000497849 UCMAQ8WVF2 138 aa17.35■□□□□ 0.37
VIM-208ENST00000497849 BAP1Q92560 729 aa17.35■□□□□ 0.37
VIM-208ENST00000497849 BIRC7Q96CA5 298 aa17.35■□□□□ 0.37
VIM-208ENST00000497849 PIWIL1Q96J94 861 aaKnown RBP17.35■□□□□ 0.37
VIM-208ENST00000497849 ORAI3Q9BRQ5 295 aa17.35■□□□□ 0.37
VIM-208ENST00000497849 NRSN2Q9GZP1 204 aa17.35■□□□□ 0.37
VIM-208ENST00000497849 XYLT2Q9H1B5 865 aa17.35■□□□□ 0.37
VIM-208ENST00000497849 SMYD3Q9H7B4 428 aa17.35■□□□□ 0.37
VIM-208ENST00000497849 KRT82Q9NSB4 513 aa17.35■□□□□ 0.37
VIM-208ENST00000497849 HSPBP1Q9NZL4 362 aa17.35■□□□□ 0.37
VIM-208ENST00000497849 NXF1Q9UBU9 619 aaKnown RBP17.35■□□□□ 0.37
VIM-208ENST00000497849 DNMT3LQ9UJW3 386 aa17.35■□□□□ 0.37
VIM-208ENST00000497849 NUDT5Q9UKK9 219 aa17.35■□□□□ 0.37
VIM-208ENST00000497849 CLEC4EQ9ULY5 219 aa17.35■□□□□ 0.37
VIM-208ENST00000497849 ATP8B3O60423 1300 aa17.35■□□□□ 0.37
VIM-208ENST00000497849 PLXNA2O75051 1894 aa17.35■□□□□ 0.37
VIM-208ENST00000497849 ENC1O14682 589 aa17.34■□□□□ 0.37
VIM-208ENST00000497849 TSPAN3O60637 253 aa17.34■□□□□ 0.37
VIM-208ENST00000497849 KLKB1P03952 638 aa17.34■□□□□ 0.37
VIM-208ENST00000497849 EPHX1P07099 455 aa17.34■□□□□ 0.37
VIM-208ENST00000497849 DLATP10515 647 aaKnown RBP17.34■□□□□ 0.37
VIM-208ENST00000497849 C7P10643 843 aa17.34■□□□□ 0.37
VIM-208ENST00000497849 IDEP14735 1019 aa17.34■□□□□ 0.37
VIM-208ENST00000497849 TNNI1P19237 187 aa17.34■□□□□ 0.37
VIM-208ENST00000497849 ANP32AP39687 249 aaKnown RBP17.34■□□□□ 0.37
VIM-208ENST00000497849 MYL6P60660 151 aa17.34■□□□□ 0.37
VIM-208ENST00000497849 TLE3Q04726 772 aa17.34■□□□□ 0.37
VIM-208ENST00000497849 TMEM215Q68D42 235 aa17.34■□□□□ 0.37
VIM-208ENST00000497849 SV2BQ7L1I2 683 aa17.34■□□□□ 0.37
VIM-208ENST00000497849 GATAD2AQ86YP4 633 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms