RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 VIPP01282 170 aa3.81□□□□□ -1.8
PSPC1-205ENST00000497722 FGAP02671 866 aa3.81□□□□□ -1.8
PSPC1-205ENST00000497722 TMEM225BP0DP42 221 aa3.81□□□□□ -1.8
PSPC1-205ENST00000497722 MYCLP12524 364 aaPredicted RBP3.81□□□□□ -1.8
PSPC1-205ENST00000497722 SERPINB3P29508 390 aa3.81□□□□□ -1.8
PSPC1-205ENST00000497722 HTR3AP46098 478 aa3.81□□□□□ -1.8
PSPC1-205ENST00000497722 EIF4A1P60842 406 aaKnown RBP3.81□□□□□ -1.8
PSPC1-205ENST00000497722 TXNL4AP83876 142 aaKnown RBP3.81□□□□□ -1.8
PSPC1-205ENST00000497722 ICA1Q05084 483 aa3.81□□□□□ -1.8
PSPC1-205ENST00000497722 BFSP2Q13515 415 aa3.81□□□□□ -1.8
PSPC1-205ENST00000497722 MORC3Q14149 939 aa3.81□□□□□ -1.8
PSPC1-205ENST00000497722 PDCD2Q16342 344 aaPredicted RBP3.81□□□□□ -1.8
PSPC1-205ENST00000497722 MPEG1Q2M385 716 aa3.81□□□□□ -1.8
PSPC1-205ENST00000497722 ARHGAP15Q53QZ3 475 aa3.81□□□□□ -1.8
PSPC1-205ENST00000497722 DGKKQ5KSL6 1271 aa3.81□□□□□ -1.8
PSPC1-205ENST00000497722 C10orf62Q5T681 223 aaPredicted RBP3.81□□□□□ -1.8
PSPC1-205ENST00000497722 MEX3CQ5U5Q3 659 aaKnown RBP3.81□□□□□ -1.8
PSPC1-205ENST00000497722 MANEALQ5VSG8 457 aa3.81□□□□□ -1.8
PSPC1-205ENST00000497722 TOGARAM2Q6ZUX3 1019 aa3.81□□□□□ -1.8
PSPC1-205ENST00000497722 KRT73Q86Y46 540 aa3.81□□□□□ -1.8
PSPC1-205ENST00000497722 RASGRP3Q8IV61 690 aa3.81□□□□□ -1.8
PSPC1-205ENST00000497722 C16orf71Q8IYS4 520 aaPredicted RBP3.81□□□□□ -1.8
PSPC1-205ENST00000497722 LINC01465Q8N7H1 131 aa3.81□□□□□ -1.8
PSPC1-205ENST00000497722 SPATA3Q8NHX4 192 aa3.81□□□□□ -1.8
PSPC1-205ENST00000497722 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.81□□□□□ -1.8
PSPC1-205ENST00000497722 POF1BQ8WVV4 589 aa3.81□□□□□ -1.8
PSPC1-205ENST00000497722 PRPF18Q99633 342 aaKnown RBP3.81□□□□□ -1.8
PSPC1-205ENST00000497722 USP29Q9HBJ7 922 aa3.81□□□□□ -1.8
PSPC1-205ENST00000497722 TM7SF3Q9NS93 570 aa3.81□□□□□ -1.8
PSPC1-205ENST00000497722 RGL1Q9NZL6 768 aa3.81□□□□□ -1.8
PSPC1-205ENST00000497722 LRFN1Q9P244 771 aa3.81□□□□□ -1.8
PSPC1-205ENST00000497722 MGAT4CQ9UBM8 478 aa3.81□□□□□ -1.8
PSPC1-205ENST00000497722 TAGLN3Q9UI15 199 aa3.81□□□□□ -1.8
PSPC1-205ENST00000497722 SCAF8Q9UPN6 1271 aaKnown RBP3.81□□□□□ -1.8
PSPC1-205ENST00000497722 ABHD14A-ACY1A0A1B0GW23 586 aa3.8□□□□□ -1.8
PSPC1-205ENST00000497722 PIP5K1BO14986 540 aa3.8□□□□□ -1.8
PSPC1-205ENST00000497722 TMPRSS11DO60235 418 aa3.8□□□□□ -1.8
PSPC1-205ENST00000497722 PMPCBO75439 489 aa3.8□□□□□ -1.8
PSPC1-205ENST00000497722 GCATO75600 419 aa3.8□□□□□ -1.8
PSPC1-205ENST00000497722 USP1O94782 785 aa3.8□□□□□ -1.8
PSPC1-205ENST00000497722 IGKV2-30P06310 120 aa3.8□□□□□ -1.8
PSPC1-205ENST00000497722 SLC3A2P08195 630 aaKnown RBP3.8□□□□□ -1.8
PSPC1-205ENST00000497722 DRD1P21728 446 aa3.8□□□□□ -1.8
PSPC1-205ENST00000497722 AKT1P31749 480 aa3.8□□□□□ -1.8
PSPC1-205ENST00000497722 GKP32189 559 aa3.8□□□□□ -1.8
PSPC1-205ENST00000497722 NR4A2P43354 598 aa3.8□□□□□ -1.8
PSPC1-205ENST00000497722 GSTM5P46439 218 aa3.8□□□□□ -1.8
PSPC1-205ENST00000497722 TIRAPP58753 221 aa3.8□□□□□ -1.8
PSPC1-205ENST00000497722 NSUN2Q08J23 767 aaKnown RBP eCLIP3.8□□□□□ -1.8
PSPC1-205ENST00000497722 ARL6IP4Q66PJ3 421 aaKnown RBP3.8□□□□□ -1.8
PSPC1-205ENST00000497722 ZNF813Q6ZN06 617 aa3.8□□□□□ -1.8
PSPC1-205ENST00000497722 USP49Q70CQ1 688 aa3.8□□□□□ -1.8
PSPC1-205ENST00000497722 KRT27Q7Z3Y8 459 aa3.8□□□□□ -1.8
PSPC1-205ENST00000497722 GATAD2AQ86YP4 633 aa3.8□□□□□ -1.8
PSPC1-205ENST00000497722 SFTPA1Q8IWL2 248 aa3.8□□□□□ -1.8
PSPC1-205ENST00000497722 SPICE1Q8N0Z3 855 aa3.8□□□□□ -1.8
PSPC1-205ENST00000497722 GLIS1Q8NBF1 620 aa3.8□□□□□ -1.8
PSPC1-205ENST00000497722 DENND1AQ8TEH3 1009 aa3.8□□□□□ -1.8
PSPC1-205ENST00000497722 IPO4Q8TEX9 1081 aaKnown RBP3.8□□□□□ -1.8
PSPC1-205ENST00000497722 PNISRQ8TF01 805 aaKnown RBP3.8□□□□□ -1.8
PSPC1-205ENST00000497722 IGFBPL1Q8WX77 278 aa3.8□□□□□ -1.8
PSPC1-205ENST00000497722 PMM1Q92871 262 aa3.8□□□□□ -1.8
PSPC1-205ENST00000497722 COQ8BQ96D53 544 aa3.8□□□□□ -1.8
PSPC1-205ENST00000497722 TMEM41AQ96HV5 264 aa3.8□□□□□ -1.8
PSPC1-205ENST00000497722 FAM227BQ96M60 508 aa3.8□□□□□ -1.8
PSPC1-205ENST00000497722 PAGR1Q9BTK6 254 aa3.8□□□□□ -1.8
PSPC1-205ENST00000497722 CRB3Q9BUF7 120 aa3.8□□□□□ -1.8
PSPC1-205ENST00000497722 KRTAP2-2Q9BYT5 123 aa3.8□□□□□ -1.8
PSPC1-205ENST00000497722 CIPCQ9C0C6 399 aa3.8□□□□□ -1.8
PSPC1-205ENST00000497722 VPS16Q9H269 839 aa3.8□□□□□ -1.8
PSPC1-205ENST00000497722 EPS8L2Q9H6S3 715 aa3.8□□□□□ -1.8
PSPC1-205ENST00000497722 GAR1Q9NY12 217 aaKnown RBP3.8□□□□□ -1.8
PSPC1-205ENST00000497722 TUBA8Q9NY65 449 aaPredicted RBP3.8□□□□□ -1.8
PSPC1-205ENST00000497722 SLC27A6Q9Y2P4 619 aa3.8□□□□□ -1.8
PSPC1-205ENST00000497722 PNMA6EA0A0J9YXQ4 647 aa3.79□□□□□ -1.8
PSPC1-205ENST00000497722 hCG_1642624A0A1W2PR95 340 aa3.79□□□□□ -1.8
PSPC1-205ENST00000497722 KCNU1A8MYU2 1149 aa3.79□□□□□ -1.8
PSPC1-205ENST00000497722 WDR47O94967 919 aa3.79□□□□□ -1.8
PSPC1-205ENST00000497722 PECAM1P16284 738 aaPredicted RBP3.79□□□□□ -1.8
PSPC1-205ENST00000497722 ATF7P17544 494 aaPredicted RBP3.79□□□□□ -1.8
PSPC1-205ENST00000497722 EGR1P18146 543 aa3.79□□□□□ -1.8
PSPC1-205ENST00000497722 ATP5F1P24539 256 aaPredicted RBP3.79□□□□□ -1.8
PSPC1-205ENST00000497722 ARHGAP25P42331 645 aa3.79□□□□□ -1.8
PSPC1-205ENST00000497722 COPB1P53618 953 aaKnown RBP3.79□□□□□ -1.8
PSPC1-205ENST00000497722 ALDH18A1P54886 795 aaKnown RBP3.79□□□□□ -1.8
PSPC1-205ENST00000497722 TIAL1Q01085 375 aaKnown RBP eCLIP3.79□□□□□ -1.8
PSPC1-205ENST00000497722 LAMB3Q13751 1172 aa3.79□□□□□ -1.8
PSPC1-205ENST00000497722 BLMHQ13867 455 aa3.79□□□□□ -1.8
PSPC1-205ENST00000497722 TRIP6Q15654 476 aaKnown RBP3.79□□□□□ -1.8
PSPC1-205ENST00000497722 RAB30Q15771 203 aa3.79□□□□□ -1.8
PSPC1-205ENST00000497722 MAPKAPK3Q16644 382 aa3.79□□□□□ -1.8
PSPC1-205ENST00000497722 CERKLQ49MI3 558 aaPredicted RBP3.79□□□□□ -1.8
PSPC1-205ENST00000497722 CCDC38Q502W7 563 aa3.79□□□□□ -1.8
PSPC1-205ENST00000497722 RAP1GAP2Q684P5 730 aa3.79□□□□□ -1.8
PSPC1-205ENST00000497722 PTCHD4Q6ZW05 846 aa3.79□□□□□ -1.8
PSPC1-205ENST00000497722 FAM71DQ8N9W8 422 aa3.79□□□□□ -1.8
PSPC1-205ENST00000497722 ATG16L2Q8NAA4 619 aa3.79□□□□□ -1.8
PSPC1-205ENST00000497722 MBD3L2Q8NHZ7 208 aaPredicted RBP3.79□□□□□ -1.8
PSPC1-205ENST00000497722 CCT6BQ92526 530 aa3.79□□□□□ -1.8
PSPC1-205ENST00000497722 RUBCNQ92622 972 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms