RNA–Protein interactions for RNA: ENST00000496756.2

PHGDH-207, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-207ENST00000496756 C11orf74Q86VG3 221 aa13.92□□□□□ -0.18
PHGDH-207ENST00000496756 SLC47A2Q86VL8 602 aa13.92□□□□□ -0.18
PHGDH-207ENST00000496756 EFCAB13Q8IY85 973 aa13.92□□□□□ -0.18
PHGDH-207ENST00000496756 LRRC52Q8N7C0 313 aa13.92□□□□□ -0.18
PHGDH-207ENST00000496756 RBBP8NLQ8NC74 664 aaPredicted RBP13.92□□□□□ -0.18
PHGDH-207ENST00000496756 GATA6Q92908 595 aa13.92□□□□□ -0.18
PHGDH-207ENST00000496756 VCPIP1Q96JH7 1222 aa13.92□□□□□ -0.18
PHGDH-207ENST00000496756 GCNAQ96QF7 691 aa13.92□□□□□ -0.18
PHGDH-207ENST00000496756 ZNF518BQ9C0D4 1074 aa13.92□□□□□ -0.18
PHGDH-207ENST00000496756 APOBEC3GQ9HC16 384 aaKnown RBP13.92□□□□□ -0.18
PHGDH-207ENST00000496756 TMEM9BQ9NQ34 198 aa13.92□□□□□ -0.18
PHGDH-207ENST00000496756 UVRAGQ9P2Y5 699 aa13.92□□□□□ -0.18
PHGDH-207ENST00000496756 KIAA1257Q9ULG3 409 aa13.92□□□□□ -0.18
PHGDH-207ENST00000496756 UBQLN1Q9UMX0 589 aaKnown RBP13.92□□□□□ -0.18
PHGDH-207ENST00000496756 EML5Q05BV3 1969 aa13.92□□□□□ -0.18
PHGDH-207ENST00000496756 KIF26AQ9ULI4 1882 aaPredicted RBP13.91□□□□□ -0.18
PHGDH-207ENST00000496756 LNP1A1A4G5 178 aa13.91□□□□□ -0.18
PHGDH-207ENST00000496756 VNN2O95498 520 aa13.91□□□□□ -0.18
PHGDH-207ENST00000496756 PRAMEF12O95522 483 aa13.91□□□□□ -0.18
PHGDH-207ENST00000496756 ABL1P00519 1130 aa13.91□□□□□ -0.18
PHGDH-207ENST00000496756 CST3P01034 146 aaPredicted RBP13.91□□□□□ -0.18
PHGDH-207ENST00000496756 FTLP02792 175 aaPredicted RBP13.91□□□□□ -0.18
PHGDH-207ENST00000496756 NFICP08651 508 aa13.91□□□□□ -0.18
PHGDH-207ENST00000496756 KRT19P08727 400 aa13.91□□□□□ -0.18
PHGDH-207ENST00000496756 PAEPP09466 180 aa13.91□□□□□ -0.18
PHGDH-207ENST00000496756 DRD1P21728 446 aa13.91□□□□□ -0.18
PHGDH-207ENST00000496756 CDC25CP30307 473 aa13.91□□□□□ -0.18
PHGDH-207ENST00000496756 GNA15P30679 374 aa13.91□□□□□ -0.18
PHGDH-207ENST00000496756 ZNF132P52740 706 aa13.91□□□□□ -0.18
PHGDH-207ENST00000496756 FMO1Q01740 532 aa13.91□□□□□ -0.18
PHGDH-207ENST00000496756 RUNX3Q13761 415 aa13.91□□□□□ -0.18
PHGDH-207ENST00000496756 VEPH1Q14D04 833 aa13.91□□□□□ -0.18
PHGDH-207ENST00000496756 CLEC16AQ2KHT3 1053 aa13.91□□□□□ -0.18
PHGDH-207ENST00000496756 ACAD10Q6JQN1 1059 aa13.91□□□□□ -0.18
PHGDH-207ENST00000496756 FSTL4Q6MZW2 842 aa13.91□□□□□ -0.18
PHGDH-207ENST00000496756 TMEM270Q6UE05 265 aa13.91□□□□□ -0.18
PHGDH-207ENST00000496756 UBR7Q8N806 425 aa13.91□□□□□ -0.18
PHGDH-207ENST00000496756 C1orf127Q8N9H9 656 aa13.91□□□□□ -0.18
PHGDH-207ENST00000496756 ZCCHC14Q8WYQ9 949 aaKnown RBP13.91□□□□□ -0.18
PHGDH-207ENST00000496756 UBXN4Q92575 508 aa13.91□□□□□ -0.18
PHGDH-207ENST00000496756 KIF12Q96FN5 646 aa13.91□□□□□ -0.18
PHGDH-207ENST00000496756 SCNM1Q9BWG6 230 aa13.91□□□□□ -0.18
PHGDH-207ENST00000496756 XYLT2Q9H1B5 865 aa13.91□□□□□ -0.18
PHGDH-207ENST00000496756 CRISPLD1Q9H336 500 aa13.91□□□□□ -0.18
PHGDH-207ENST00000496756 GKN1Q9NS71 199 aa13.91□□□□□ -0.18
PHGDH-207ENST00000496756 DPP3Q9NY33 737 aa13.91□□□□□ -0.18
PHGDH-207ENST00000496756 EBF1Q9UH73 591 aa13.91□□□□□ -0.18
PHGDH-207ENST00000496756 GTF3C4Q9UKN8 822 aa13.91□□□□□ -0.18
PHGDH-207ENST00000496756 SNX12Q9UMY4 172 aa13.91□□□□□ -0.18
PHGDH-207ENST00000496756 CEP83Q9Y592 693 aa13.91□□□□□ -0.18
PHGDH-207ENST00000496756 CAPN6Q9Y6Q1 641 aa13.91□□□□□ -0.18
PHGDH-207ENST00000496756 DUSP10Q9Y6W6 482 aa13.91□□□□□ -0.18
PHGDH-207ENST00000496756 DMXL2Q8TDJ6 3036 aa13.91□□□□□ -0.18
PHGDH-207ENST00000496756 CTAGE15A4D2H0 777 aa13.9□□□□□ -0.18
PHGDH-207ENST00000496756 KHNYNO15037 678 aaKnown RBP13.9□□□□□ -0.18
PHGDH-207ENST00000496756 FANCGO15287 622 aa13.9□□□□□ -0.18
PHGDH-207ENST00000496756 RNF40O75150 1001 aa13.9□□□□□ -0.18
PHGDH-207ENST00000496756 MTA2O94776 668 aa13.9□□□□□ -0.18
PHGDH-207ENST00000496756 APBB3O95704 486 aa13.9□□□□□ -0.18
PHGDH-207ENST00000496756 ITGB3P05106 788 aa13.9□□□□□ -0.18
PHGDH-207ENST00000496756 OR4Q2P0C623 313 aa13.9□□□□□ -0.18
PHGDH-207ENST00000496756 CTAGE8P0CG41 777 aa13.9□□□□□ -0.18
PHGDH-207ENST00000496756 CHRNB2P17787 502 aa13.9□□□□□ -0.18
PHGDH-207ENST00000496756 SPINK2P20155 84 aa13.9□□□□□ -0.18
PHGDH-207ENST00000496756 PAX3P23760 479 aa13.9□□□□□ -0.18
PHGDH-207ENST00000496756 PAFAH1B1P43034 410 aa13.9□□□□□ -0.18
PHGDH-207ENST00000496756 NSFP46459 744 aaKnown RBP13.9□□□□□ -0.18
PHGDH-207ENST00000496756 TNNC1P63316 161 aa13.9□□□□□ -0.18
PHGDH-207ENST00000496756 STILQ15468 1287 aa13.9□□□□□ -0.18
PHGDH-207ENST00000496756 SYT13Q7L8C5 426 aa13.9□□□□□ -0.18
PHGDH-207ENST00000496756 CTAGE6Q86UF2 777 aa13.9□□□□□ -0.18
PHGDH-207ENST00000496756 CTAGE4Q8IX94 777 aa13.9□□□□□ -0.18
PHGDH-207ENST00000496756 ATAD1Q8NBU5 361 aa13.9□□□□□ -0.18
PHGDH-207ENST00000496756 MSANTD4Q8NCY6 345 aa13.9□□□□□ -0.18
PHGDH-207ENST00000496756 OLIG1Q8TAK6 271 aa13.9□□□□□ -0.18
PHGDH-207ENST00000496756 SLC20A1Q8WUM9 679 aa13.9□□□□□ -0.18
PHGDH-207ENST00000496756 GOLGA1Q92805 767 aa13.9□□□□□ -0.18
PHGDH-207ENST00000496756 HPDLQ96IR7 371 aa13.9□□□□□ -0.18
PHGDH-207ENST00000496756 ZNF560Q96MR9 790 aa13.9□□□□□ -0.18
PHGDH-207ENST00000496756 HHIPQ96QV1 700 aa13.9□□□□□ -0.18
PHGDH-207ENST00000496756 FAM83CQ9BQN1 747 aa13.9□□□□□ -0.18
PHGDH-207ENST00000496756 CISHQ9NSE2 258 aa13.9□□□□□ -0.18
PHGDH-207ENST00000496756 LHX6Q9UPM6 363 aa13.9□□□□□ -0.18
PHGDH-207ENST00000496756 SLC27A5Q9Y2P5 690 aa13.9□□□□□ -0.18
PHGDH-207ENST00000496756 TIMM13Q9Y5L4 95 aaPredicted RBP13.9□□□□□ -0.18
PHGDH-207ENST00000496756 ATG2BQ96BY7 2078 aa13.9□□□□□ -0.18
PHGDH-207ENST00000496756 AKAP13Q12802 2813 aa13.9□□□□□ -0.18
PHGDH-207ENST00000496756 WDFY3Q8IZQ1 3526 aa13.89□□□□□ -0.19
PHGDH-207ENST00000496756 MTMR11A4FU01 709 aa13.89□□□□□ -0.19
PHGDH-207ENST00000496756 BUB1O43683 1085 aa13.89□□□□□ -0.19
PHGDH-207ENST00000496756 PALMO75781 387 aa13.89□□□□□ -0.19
PHGDH-207ENST00000496756 ATP1A1P05023 1023 aaKnown RBP13.89□□□□□ -0.19
PHGDH-207ENST00000496756 MMEP08473 750 aa13.89□□□□□ -0.19
PHGDH-207ENST00000496756 FAM163BP0C2L3 166 aa13.89□□□□□ -0.19
PHGDH-207ENST00000496756 TYMPP19971 482 aa13.89□□□□□ -0.19
PHGDH-207ENST00000496756 LRPAP1P30533 357 aa13.89□□□□□ -0.19
PHGDH-207ENST00000496756 GBP1P32455 592 aa13.89□□□□□ -0.19
PHGDH-207ENST00000496756 ASPAP45381 313 aa13.89□□□□□ -0.19
PHGDH-207ENST00000496756 TUFMP49411 452 aaKnown RBP13.89□□□□□ -0.19
PHGDH-207ENST00000496756 AARSP49588 968 aaKnown RBP eCLIP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms