RNA–Protein interactions for RNA: ENST00000496738.5

LMNA-216, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-216ENST00000496738 KRT222Q8N1A0 295 aa17.57■□□□□ 0.4
LMNA-216ENST00000496738 MAGOHBQ96A72 148 aaKnown RBP17.57■□□□□ 0.4
LMNA-216ENST00000496738 PCDH18Q9HCL0 1135 aa17.57■□□□□ 0.4
LMNA-216ENST00000496738 ANLNQ9NQW6 1124 aa17.57■□□□□ 0.4
LMNA-216ENST00000496738 DMGDHQ9UI17 866 aaKnown RBP17.57■□□□□ 0.4
LMNA-216ENST00000496738 PLXNA3P51805 1871 aa17.56■□□□□ 0.4
LMNA-216ENST00000496738 ZSCAN5CA6NGD5 496 aaPredicted RBP17.56■□□□□ 0.4
LMNA-216ENST00000496738 PHF2O75151 1096 aa17.56■□□□□ 0.4
LMNA-216ENST00000496738 RTN3O95197 1032 aaPredicted RBP17.56■□□□□ 0.4
LMNA-216ENST00000496738 KCNJ1P48048 391 aa17.56■□□□□ 0.4
LMNA-216ENST00000496738 HNRNPH2P55795 449 aaKnown RBP17.56■□□□□ 0.4
LMNA-216ENST00000496738 TPGS2Q68CL5 300 aa17.56■□□□□ 0.4
LMNA-216ENST00000496738 CASP10Q92851 521 aa17.56■□□□□ 0.4
LMNA-216ENST00000496738 WDR6Q9NNW5 1121 aaKnown RBP17.56■□□□□ 0.4
LMNA-216ENST00000496738 SAE1Q9UBE0 346 aaPredicted RBP17.56■□□□□ 0.4
LMNA-216ENST00000496738 NR2E3Q9Y5X4 410 aa17.56■□□□□ 0.4
LMNA-216ENST00000496738 ENDOD1O94919 500 aa17.56■□□□□ 0.4
LMNA-216ENST00000496738 ARSEP51690 589 aa17.56■□□□□ 0.4
LMNA-216ENST00000496738 COPS2P61201 443 aa17.56■□□□□ 0.4
LMNA-216ENST00000496738 MON1AQ86VX9 555 aa17.56■□□□□ 0.4
LMNA-216ENST00000496738 RNF139Q8WU17 664 aa17.56■□□□□ 0.4
LMNA-216ENST00000496738 POF1BQ8WVV4 589 aa17.56■□□□□ 0.4
LMNA-216ENST00000496738 TEKT4Q8WW24 435 aa17.56■□□□□ 0.4
LMNA-216ENST00000496738 KCTD15Q96SI1 283 aaPredicted RBP17.56■□□□□ 0.4
LMNA-216ENST00000496738 FZD10Q9ULW2 581 aa17.56■□□□□ 0.4
LMNA-216ENST00000496738 GBF1Q92538 1859 aa17.55■□□□□ 0.4
LMNA-216ENST00000496738 HIDE1A8MVS5 230 aa17.55■□□□□ 0.4
LMNA-216ENST00000496738 MDM4O15151 490 aa17.55■□□□□ 0.4
LMNA-216ENST00000496738 TTI1O43156 1089 aa17.55■□□□□ 0.4
LMNA-216ENST00000496738 ELF1P32519 619 aa17.55■□□□□ 0.4
LMNA-216ENST00000496738 TWF1Q12792 350 aa17.55■□□□□ 0.4
LMNA-216ENST00000496738 CCDC70Q6NSX1 233 aa17.55■□□□□ 0.4
LMNA-216ENST00000496738 RNF34Q969K3 372 aa17.55■□□□□ 0.4
LMNA-216ENST00000496738 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.55■□□□□ 0.44e-6■□□□□ 8.2
LMNA-216ENST00000496738 IL37Q9NZH6 218 aa17.55■□□□□ 0.4
LMNA-216ENST00000496738 COL4A4P53420 1690 aaPredicted RBP17.55■□□□□ 0.4
LMNA-216ENST00000496738 ESYT3A0FGR9 886 aa17.55■□□□□ 0.4
LMNA-216ENST00000496738 I6L893 689 aaPredicted RBP17.55■□□□□ 0.4
LMNA-216ENST00000496738 CST8O60676 142 aa17.55■□□□□ 0.4
LMNA-216ENST00000496738 TJP3O95049 919 aa17.55■□□□□ 0.4
LMNA-216ENST00000496738 L1CAMP32004 1257 aa17.55■□□□□ 0.4
LMNA-216ENST00000496738 PBX2P40425 430 aa17.55■□□□□ 0.4
LMNA-216ENST00000496738 ALDH1A3P47895 512 aa17.55■□□□□ 0.4
LMNA-216ENST00000496738 PPP2R5EQ16537 467 aa17.55■□□□□ 0.4
LMNA-216ENST00000496738 CCDC137Q6PK04 289 aaKnown RBP17.55■□□□□ 0.4
LMNA-216ENST00000496738 TRIM62Q9BVG3 475 aa17.55■□□□□ 0.4
LMNA-216ENST00000496738 CERS4Q9HA82 394 aa17.55■□□□□ 0.4
LMNA-216ENST00000496738 FNIP2Q9P278 1114 aa17.55■□□□□ 0.4
LMNA-216ENST00000496738 GREB1Q4ZG55 1949 aa17.54■□□□□ 0.4
LMNA-216ENST00000496738 TGM5O43548 720 aa17.54■□□□□ 0.4
LMNA-216ENST00000496738 HEXIM1O94992 359 aaKnown RBP17.54■□□□□ 0.4
LMNA-216ENST00000496738 TBX18O95935 607 aa17.54■□□□□ 0.4
LMNA-216ENST00000496738 GGCXP38435 758 aa17.54■□□□□ 0.4
LMNA-216ENST00000496738 TUBB4BP68371 445 aa17.54■□□□□ 0.4
LMNA-216ENST00000496738 FBXO38Q6PIJ6 1188 aa17.54■□□□□ 0.4
LMNA-216ENST00000496738 SPPL3Q8TCT6 385 aa17.54■□□□□ 0.4
LMNA-216ENST00000496738 MICAL1Q8TDZ2 1067 aa17.54■□□□□ 0.4
LMNA-216ENST00000496738 TRIM51Q9BSJ1 452 aa17.54■□□□□ 0.4
LMNA-216ENST00000496738 DCLK3Q9C098 648 aa17.54■□□□□ 0.4
LMNA-216ENST00000496738 RXFP1Q9HBX9 757 aa17.54■□□□□ 0.4
LMNA-216ENST00000496738 MTMR10Q9NXD2 777 aa17.54■□□□□ 0.4
LMNA-216ENST00000496738 SNX10Q9Y5X0 201 aa17.54■□□□□ 0.4
LMNA-216ENST00000496738 ZNF638Q14966 1978 aaKnown RBP17.54■□□□□ 0.4
LMNA-216ENST00000496738 FAM92AA1XBS5 289 aa17.53■□□□□ 0.4
LMNA-216ENST00000496738 RARGP13631 454 aa17.53■□□□□ 0.4
LMNA-216ENST00000496738 IL4RP24394 825 aa17.53■□□□□ 0.4
LMNA-216ENST00000496738 PTPN7P35236 360 aa17.53■□□□□ 0.4
LMNA-216ENST00000496738 VSNL1P62760 191 aa17.53■□□□□ 0.4
LMNA-216ENST00000496738 EFEMP1Q12805 493 aa17.53■□□□□ 0.4
LMNA-216ENST00000496738 PLD1Q13393 1074 aa17.53■□□□□ 0.4
LMNA-216ENST00000496738 SND1Q7KZF4 910 aaKnown RBP eCLIP17.53■□□□□ 0.41e-8■■□□□ 12.8
LMNA-216ENST00000496738 MAIP1Q8WWC4 291 aa17.53■□□□□ 0.4
LMNA-216ENST00000496738 KLHL5Q96PQ7 755 aa17.53■□□□□ 0.4
LMNA-216ENST00000496738 MAK16Q9BXY0 300 aaKnown RBP17.53■□□□□ 0.4
LMNA-216ENST00000496738 TKTL2Q9H0I9 626 aa17.53■□□□□ 0.4
LMNA-216ENST00000496738 TLR8Q9NR97 1041 aaKnown RBP17.53■□□□□ 0.4
LMNA-216ENST00000496738 DONSONQ9NYP3 566 aa17.53■□□□□ 0.4
LMNA-216ENST00000496738 RRN3Q9NYV6 651 aa17.53■□□□□ 0.4
LMNA-216ENST00000496738 YBX2Q9Y2T7 364 aaKnown RBP17.53■□□□□ 0.4
LMNA-216ENST00000496738 INSL5Q9Y5Q6 135 aa17.53■□□□□ 0.4
LMNA-216ENST00000496738 GRM6O15303 877 aa17.53■□□□□ 0.4
LMNA-216ENST00000496738 KLRC2P26717 231 aa17.53■□□□□ 0.4
LMNA-216ENST00000496738 CHRNA3P32297 505 aa17.53■□□□□ 0.4
LMNA-216ENST00000496738 IRS1P35568 1242 aa17.53■□□□□ 0.4
LMNA-216ENST00000496738 COILP38432 576 aaPredicted RBP17.53■□□□□ 0.4
LMNA-216ENST00000496738 DR1Q01658 176 aa17.53■□□□□ 0.4
LMNA-216ENST00000496738 GUCY2DQ02846 1103 aa17.53■□□□□ 0.4
LMNA-216ENST00000496738 CREMQ03060 361 aa17.53■□□□□ 0.4
LMNA-216ENST00000496738 PDK2Q15119 407 aa17.53■□□□□ 0.4
LMNA-216ENST00000496738 TAF12Q16514 161 aa17.53■□□□□ 0.4
LMNA-216ENST00000496738 DPYSL2Q16555 572 aa17.53■□□□□ 0.4
LMNA-216ENST00000496738 TAZQ16635 292 aa17.53■□□□□ 0.4
LMNA-216ENST00000496738 NPNTQ6UXI9 565 aa17.53■□□□□ 0.4
LMNA-216ENST00000496738 MAP7D3Q8IWC1 876 aa17.53■□□□□ 0.4
LMNA-216ENST00000496738 GSPT2Q8IYD1 628 aaKnown RBP17.53■□□□□ 0.4
LMNA-216ENST00000496738 CCDC105Q8IYK2 499 aa17.53■□□□□ 0.4
LMNA-216ENST00000496738 ARHGAP18Q8N392 663 aa17.53■□□□□ 0.4
LMNA-216ENST00000496738 PGAP3Q96FM1 320 aaPredicted RBP17.53■□□□□ 0.4
LMNA-216ENST00000496738 UBE2OQ9C0C9 1292 aaKnown RBP17.53■□□□□ 0.4
LMNA-216ENST00000496738 SMOC2Q9H3U7 446 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms