RNA–Protein interactions for RNA: ENST00000496427.5

CHCHD3-206, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5

Gene CHCHD3, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-206ENST00000496427 CD248Q9HCU0 757 aa7.36□□□□□ -1.23
CHCHD3-206ENST00000496427 INTS13Q9NVM9 706 aa7.36□□□□□ -1.23
CHCHD3-206ENST00000496427 DNAAF2Q9NVR5 837 aaKnown RBP7.36□□□□□ -1.23
CHCHD3-206ENST00000496427 EXOC7Q9UPT5 735 aa7.36□□□□□ -1.23
CHCHD3-206ENST00000496427 RAXQ9Y2V3 346 aa7.36□□□□□ -1.23
CHCHD3-206ENST00000496427 PCDHB9Q9Y5E1 797 aa7.36□□□□□ -1.23
CHCHD3-206ENST00000496427 KNL1Q8NG31 2342 aa7.36□□□□□ -1.23
CHCHD3-206ENST00000496427 A0A0A0MRY4 1105 aa7.35□□□□□ -1.23
CHCHD3-206ENST00000496427 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.35□□□□□ -1.23
CHCHD3-206ENST00000496427 WASH3PC4AMC7 463 aa7.35□□□□□ -1.23
CHCHD3-206ENST00000496427 PRRT4C9JH25 899 aa7.35□□□□□ -1.23
CHCHD3-206ENST00000496427 NEDD8-MDP1E9PL57 170 aa7.35□□□□□ -1.23
CHCHD3-206ENST00000496427 HOXC11O43248 304 aaPredicted RBP7.35□□□□□ -1.23
CHCHD3-206ENST00000496427 SLC26A4O43511 780 aa7.35□□□□□ -1.23
CHCHD3-206ENST00000496427 LDHAP00338 332 aaKnown RBP7.35□□□□□ -1.23
CHCHD3-206ENST00000496427 TNNC2P02585 160 aa7.35□□□□□ -1.23
CHCHD3-206ENST00000496427 IDEP14735 1019 aa7.35□□□□□ -1.23
CHCHD3-206ENST00000496427 PFKLP17858 780 aa7.35□□□□□ -1.23
CHCHD3-206ENST00000496427 GARTP22102 1010 aa7.35□□□□□ -1.23
CHCHD3-206ENST00000496427 NTSR1P30989 418 aa7.35□□□□□ -1.23
CHCHD3-206ENST00000496427 RDXP35241 583 aaKnown RBP7.35□□□□□ -1.23
CHCHD3-206ENST00000496427 HOXD12P35452 270 aa7.35□□□□□ -1.23
CHCHD3-206ENST00000496427 DPP6P42658 865 aa7.35□□□□□ -1.23
CHCHD3-206ENST00000496427 PTGIRP43119 386 aa7.35□□□□□ -1.23
CHCHD3-206ENST00000496427 PGFP49763 221 aa7.35□□□□□ -1.23
CHCHD3-206ENST00000496427 NOP14P78316 857 aaKnown RBP7.35□□□□□ -1.23
CHCHD3-206ENST00000496427 MYO1EQ12965 1108 aa7.35□□□□□ -1.23
CHCHD3-206ENST00000496427 BYSLQ13895 437 aaKnown RBP7.35□□□□□ -1.23
CHCHD3-206ENST00000496427 SPDYCQ5MJ68 293 aa7.35□□□□□ -1.23
CHCHD3-206ENST00000496427 FOXD4L5Q5VV16 416 aaPredicted RBP7.35□□□□□ -1.23
CHCHD3-206ENST00000496427 TDRD10Q5VZ19 366 aaKnown RBP7.35□□□□□ -1.23
CHCHD3-206ENST00000496427 BTBD8Q5XKL5 378 aa7.35□□□□□ -1.23
CHCHD3-206ENST00000496427 GRAMD4Q6IC98 578 aa7.35□□□□□ -1.23
CHCHD3-206ENST00000496427 SLCO6A1Q86UG4 719 aa7.35□□□□□ -1.23
CHCHD3-206ENST00000496427 CACUL1Q86Y37 369 aa7.35□□□□□ -1.23
CHCHD3-206ENST00000496427 ZCCHC9Q8N567 271 aaKnown RBP7.35□□□□□ -1.23
CHCHD3-206ENST00000496427 OR6B3Q8NGW1 331 aa7.35□□□□□ -1.23
CHCHD3-206ENST00000496427 SCAMP5Q8TAC9 235 aa7.35□□□□□ -1.23
CHCHD3-206ENST00000496427 MYCBPAPQ8TBZ2 947 aa7.35□□□□□ -1.23
CHCHD3-206ENST00000496427 IPO4Q8TEX9 1081 aaKnown RBP7.35□□□□□ -1.23
CHCHD3-206ENST00000496427 ADAMTS14Q8WXS8 1223 aa7.35□□□□□ -1.23
CHCHD3-206ENST00000496427 BHMTQ93088 406 aa7.35□□□□□ -1.23
CHCHD3-206ENST00000496427 HPS3Q969F9 1004 aa7.35□□□□□ -1.23
CHCHD3-206ENST00000496427 LRIG1Q96JA1 1093 aa7.35□□□□□ -1.23
CHCHD3-206ENST00000496427 C8orf48Q96LL4 319 aa7.35□□□□□ -1.23
CHCHD3-206ENST00000496427 SLITRK1Q96PX8 696 aa7.35□□□□□ -1.23
CHCHD3-206ENST00000496427 B3GNT5Q9BYG0 378 aa7.35□□□□□ -1.23
CHCHD3-206ENST00000496427 SPHK2Q9NRA0 654 aa7.35□□□□□ -1.23
CHCHD3-206ENST00000496427 DNAJC17Q9NVM6 304 aaKnown RBP7.35□□□□□ -1.23
CHCHD3-206ENST00000496427 CACNA2D2Q9NY47 1150 aa7.35□□□□□ -1.23
CHCHD3-206ENST00000496427 GMIPQ9P107 970 aa7.35□□□□□ -1.23
CHCHD3-206ENST00000496427 CHORDC1Q9UHD1 332 aaPredicted RBP7.35□□□□□ -1.23
CHCHD3-206ENST00000496427 SH3BP1Q9Y3L3 701 aa7.35□□□□□ -1.23
CHCHD3-206ENST00000496427 TDRD6O60522 2096 aaKnown RBP7.35□□□□□ -1.23
CHCHD3-206ENST00000496427 A0A087X0B3 334 aa7.34□□□□□ -1.23
CHCHD3-206ENST00000496427 A0A1W2PQD8 194 aa7.34□□□□□ -1.23
CHCHD3-206ENST00000496427 E2F8A0AVK6 867 aa7.34□□□□□ -1.23
CHCHD3-206ENST00000496427 MEI4A8MW99 385 aa7.34□□□□□ -1.23
CHCHD3-206ENST00000496427 NDUFS2O75306 463 aa7.34□□□□□ -1.23
CHCHD3-206ENST00000496427 CST3P01034 146 aaPredicted RBP7.34□□□□□ -1.23
CHCHD3-206ENST00000496427 PRB1P04280 392 aa7.34□□□□□ -1.23
CHCHD3-206ENST00000496427 SYPP08247 313 aa7.34□□□□□ -1.23
CHCHD3-206ENST00000496427 GAP43P17677 238 aa7.34□□□□□ -1.23
CHCHD3-206ENST00000496427 PTPN1P18031 435 aaKnown RBP7.34□□□□□ -1.23
CHCHD3-206ENST00000496427 YWHAQP27348 245 aa7.34□□□□□ -1.23
CHCHD3-206ENST00000496427 SLC5A3P53794 718 aa7.34□□□□□ -1.23
CHCHD3-206ENST00000496427 ORC1Q13415 861 aa7.34□□□□□ -1.23
CHCHD3-206ENST00000496427 MAPRE1Q15691 268 aaKnown RBP7.34□□□□□ -1.23
CHCHD3-206ENST00000496427 SCARA5Q6ZMJ2 495 aa7.34□□□□□ -1.23
CHCHD3-206ENST00000496427 CCNI2Q6ZMN8 369 aaPredicted RBP7.34□□□□□ -1.23
CHCHD3-206ENST00000496427 TPGS1Q6ZTW0 290 aa7.34□□□□□ -1.23
CHCHD3-206ENST00000496427 DPH6Q7L8W6 267 aa7.34□□□□□ -1.23
CHCHD3-206ENST00000496427 TRAPPC11Q7Z392 1133 aa7.34□□□□□ -1.23
CHCHD3-206ENST00000496427 TRMT11Q7Z4G4 463 aaKnown RBP7.34□□□□□ -1.23
CHCHD3-206ENST00000496427 FAM35AQ86V20 835 aa7.34□□□□□ -1.23
CHCHD3-206ENST00000496427 DDX42Q86XP3 938 aaKnown RBP eCLIP7.34□□□□□ -1.23
CHCHD3-206ENST00000496427 CHPFQ8IZ52 775 aa7.34□□□□□ -1.23
CHCHD3-206ENST00000496427 NUP93Q8N1F7 819 aa7.34□□□□□ -1.23
CHCHD3-206ENST00000496427 P2RY11Q96G91 374 aa7.34□□□□□ -1.23
CHCHD3-206ENST00000496427 CLIC6Q96NY7 704 aa7.34□□□□□ -1.23
CHCHD3-206ENST00000496427 KCNK16Q96T55 309 aa7.34□□□□□ -1.23
CHCHD3-206ENST00000496427 MIR1-1HGQ9H1L0 117 aa7.34□□□□□ -1.23
CHCHD3-206ENST00000496427 SNX25Q9H3E2 840 aa7.34□□□□□ -1.23
CHCHD3-206ENST00000496427 PLK2Q9NYY3 685 aa7.34□□□□□ -1.23
CHCHD3-206ENST00000496427 TBC1D14Q9P2M4 693 aa7.34□□□□□ -1.23
CHCHD3-206ENST00000496427 DEC1Q9P2X7 70 aa7.34□□□□□ -1.23
CHCHD3-206ENST00000496427 SEL1LQ9UBV2 794 aa7.34□□□□□ -1.23
CHCHD3-206ENST00000496427 PCOLCE2Q9UKZ9 415 aa7.34□□□□□ -1.23
CHCHD3-206ENST00000496427 R3HCC1Q9Y3T6 440 aaKnown RBP7.34□□□□□ -1.23
CHCHD3-206ENST00000496427 KIF3AQ9Y496 699 aa7.34□□□□□ -1.23
CHCHD3-206ENST00000496427 CLIC4Q9Y696 253 aa7.34□□□□□ -1.23
CHCHD3-206ENST00000496427 SLCO1B1Q9Y6L6 691 aa7.34□□□□□ -1.23
CHCHD3-206ENST00000496427 FAM149AA5PLN7 773 aa7.33□□□□□ -1.24
CHCHD3-206ENST00000496427 A8MXQ7 604 aa7.33□□□□□ -1.24
CHCHD3-206ENST00000496427 KCNJ18B7U540 433 aa7.33□□□□□ -1.24
CHCHD3-206ENST00000496427 MDM4O15151 490 aa7.33□□□□□ -1.24
CHCHD3-206ENST00000496427 CBFA2T3O75081 653 aa7.33□□□□□ -1.24
CHCHD3-206ENST00000496427 CLSTN1O94985 981 aa7.33□□□□□ -1.24
CHCHD3-206ENST00000496427 TBX18O95935 607 aa7.33□□□□□ -1.24
CHCHD3-206ENST00000496427 DLATP10515 647 aaKnown RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms