RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 YKT6O15498 198 aa10.22□□□□□ -0.77
SMARCAL1-213ENST00000496037 SYNCRIPO60506 623 aaKnown RBP10.22□□□□□ -0.77
SMARCAL1-213ENST00000496037 OLFM2O95897 454 aa10.22□□□□□ -0.77
SMARCAL1-213ENST00000496037 MT-CO3P00414 261 aa10.22□□□□□ -0.77
SMARCAL1-213ENST00000496037 IGLV3-19P01714 112 aa10.22□□□□□ -0.77
SMARCAL1-213ENST00000496037 SFTPCP11686 197 aa10.22□□□□□ -0.77
SMARCAL1-213ENST00000496037 RPA1P27694 616 aa10.22□□□□□ -0.77
SMARCAL1-213ENST00000496037 PPP3CCP48454 512 aa10.22□□□□□ -0.77
SMARCAL1-213ENST00000496037 MCCD1P59942 119 aaPredicted RBP10.22□□□□□ -0.77
SMARCAL1-213ENST00000496037 INSM1Q01101 510 aaPredicted RBP10.22□□□□□ -0.77
SMARCAL1-213ENST00000496037 TMEM132DQ14C87 1099 aa10.22□□□□□ -0.77
SMARCAL1-213ENST00000496037 SV2CQ496J9 727 aa10.22□□□□□ -0.77
SMARCAL1-213ENST00000496037 CFAP221Q4G0U5 840 aa10.22□□□□□ -0.77
SMARCAL1-213ENST00000496037 CRTC2Q53ET0 693 aaPredicted RBP10.22□□□□□ -0.77
SMARCAL1-213ENST00000496037 INTS6LQ5JSJ4 861 aaKnown RBP10.22□□□□□ -0.77
SMARCAL1-213ENST00000496037 RNF187Q5TA31 235 aaPredicted RBP10.22□□□□□ -0.77
SMARCAL1-213ENST00000496037 HAUS3Q68CZ6 603 aa10.22□□□□□ -0.77
SMARCAL1-213ENST00000496037 JADE1Q6IE81 842 aa10.22□□□□□ -0.77
SMARCAL1-213ENST00000496037 BLOC1S2Q6QNY1 142 aa10.22□□□□□ -0.77
SMARCAL1-213ENST00000496037 ZPBP2Q6X784 338 aa10.22□□□□□ -0.77
SMARCAL1-213ENST00000496037 FAM124AQ86V42 546 aa10.22□□□□□ -0.77
SMARCAL1-213ENST00000496037 TMPRSS6Q8IU80 811 aa10.22□□□□□ -0.77
SMARCAL1-213ENST00000496037 SKA1Q96BD8 255 aa10.22□□□□□ -0.77
SMARCAL1-213ENST00000496037 ELF4Q99607 663 aaPredicted RBP10.22□□□□□ -0.77
SMARCAL1-213ENST00000496037 RNF38Q9H0F5 515 aa10.22□□□□□ -0.77
SMARCAL1-213ENST00000496037 LRRC4CQ9HCJ2 640 aa10.22□□□□□ -0.77
SMARCAL1-213ENST00000496037 SPHK2Q9NRA0 654 aa10.22□□□□□ -0.77
SMARCAL1-213ENST00000496037 HSPBP1Q9NZL4 362 aa10.22□□□□□ -0.77
SMARCAL1-213ENST00000496037 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.22□□□□□ -0.77
SMARCAL1-213ENST00000496037 PCDHB1Q9Y5F3 818 aa10.22□□□□□ -0.77
SMARCAL1-213ENST00000496037 STON1Q9Y6Q2 735 aa10.22□□□□□ -0.77
SMARCAL1-213ENST00000496037 MYO18AQ92614 2054 aaKnown RBP10.22□□□□□ -0.77
SMARCAL1-213ENST00000496037 UTP20O75691 2785 aaKnown RBP10.21□□□□□ -0.77
SMARCAL1-213ENST00000496037 BLACEA4D250 179 aa10.21□□□□□ -0.77
SMARCAL1-213ENST00000496037 ZNF840PA6NDX5 716 aa10.21□□□□□ -0.77
SMARCAL1-213ENST00000496037 WASH3PC4AMC7 463 aa10.21□□□□□ -0.77
SMARCAL1-213ENST00000496037 ICMTO60725 284 aa10.21□□□□□ -0.77
SMARCAL1-213ENST00000496037 CKMT2P17540 419 aa10.21□□□□□ -0.77
SMARCAL1-213ENST00000496037 ANXA13P27216 316 aa10.21□□□□□ -0.77
SMARCAL1-213ENST00000496037 PDIA3P30101 505 aaKnown RBP10.21□□□□□ -0.77
SMARCAL1-213ENST00000496037 ZNF132P52740 706 aa10.21□□□□□ -0.77
SMARCAL1-213ENST00000496037 E2F1Q01094 437 aa10.21□□□□□ -0.77
SMARCAL1-213ENST00000496037 ENOX2Q16206 610 aaKnown RBP10.21□□□□□ -0.77
SMARCAL1-213ENST00000496037 EARS2Q5JPH6 523 aaKnown RBP10.21□□□□□ -0.77
SMARCAL1-213ENST00000496037 DENND5BQ6ZUT9 1274 aa10.21□□□□□ -0.77
SMARCAL1-213ENST00000496037 CD302Q8IX05 232 aa10.21□□□□□ -0.77
SMARCAL1-213ENST00000496037 FAM26EQ8N5C1 309 aa10.21□□□□□ -0.77
SMARCAL1-213ENST00000496037 LRRN4Q8WUT4 740 aa10.21□□□□□ -0.77
SMARCAL1-213ENST00000496037 FUBP3Q96I24 572 aaKnown RBP eCLIP10.21□□□□□ -0.77
SMARCAL1-213ENST00000496037 ZNF560Q96MR9 790 aa10.21□□□□□ -0.77
SMARCAL1-213ENST00000496037 JAKMIP1Q96N16 626 aaKnown RBP10.21□□□□□ -0.77
SMARCAL1-213ENST00000496037 PSMG3-AS1Q96PY0 264 aa10.21□□□□□ -0.77
SMARCAL1-213ENST00000496037 ACBD6Q9BR61 282 aa10.21□□□□□ -0.77
SMARCAL1-213ENST00000496037 CCSER1Q9C0I3 900 aa10.21□□□□□ -0.77
SMARCAL1-213ENST00000496037 C6orf106Q9H6K1 298 aaPredicted RBP10.21□□□□□ -0.77
SMARCAL1-213ENST00000496037 METTL5Q9NRN9 209 aaKnown RBP10.21□□□□□ -0.77
SMARCAL1-213ENST00000496037 DDX43Q9NXZ2 648 aaKnown RBP10.21□□□□□ -0.77
SMARCAL1-213ENST00000496037 USP9YO00507 2555 aaPredicted RBP10.21□□□□□ -0.78
SMARCAL1-213ENST00000496037 MYLKQ15746 1914 aa10.21□□□□□ -0.78
SMARCAL1-213ENST00000496037 ANAPC1Q9H1A4 1944 aa10.21□□□□□ -0.78
SMARCAL1-213ENST00000496037 KPNA7A9QM74 516 aa10.2□□□□□ -0.78
SMARCAL1-213ENST00000496037 PRRT4C9JH25 899 aa10.2□□□□□ -0.78
SMARCAL1-213ENST00000496037 NEDD8-MDP1E9PL57 170 aa10.2□□□□□ -0.78
SMARCAL1-213ENST00000496037 HIP1RO75146 1068 aa10.2□□□□□ -0.78
SMARCAL1-213ENST00000496037 FSBPO95073 299 aa10.2□□□□□ -0.78
SMARCAL1-213ENST00000496037 OAS1P00973 400 aaKnown RBP10.2□□□□□ -0.78
SMARCAL1-213ENST00000496037 CCNYL3P0C7X3 344 aa10.2□□□□□ -0.78
SMARCAL1-213ENST00000496037 ACAT1P24752 427 aaKnown RBP10.2□□□□□ -0.78
SMARCAL1-213ENST00000496037 CD27P26842 260 aa10.2□□□□□ -0.78
SMARCAL1-213ENST00000496037 LSSP48449 732 aa10.2□□□□□ -0.78
SMARCAL1-213ENST00000496037 ARRB1P49407 418 aaPredicted RBP10.2□□□□□ -0.78
SMARCAL1-213ENST00000496037 INHBCP55103 352 aa10.2□□□□□ -0.78
SMARCAL1-213ENST00000496037 GRIN1Q05586 938 aa10.2□□□□□ -0.78
SMARCAL1-213ENST00000496037 ZSCAN23Q3MJ62 389 aa10.2□□□□□ -0.78
SMARCAL1-213ENST00000496037 KCNT1Q5JUK3 1230 aa10.2□□□□□ -0.78
SMARCAL1-213ENST00000496037 TMEM25Q86YD3 366 aa10.2□□□□□ -0.78
SMARCAL1-213ENST00000496037 ANKMY2Q8IV38 441 aa10.2□□□□□ -0.78
SMARCAL1-213ENST00000496037 BBS7Q8IWZ6 715 aa10.2□□□□□ -0.78
SMARCAL1-213ENST00000496037 SAP25Q8TEE9 199 aa10.2□□□□□ -0.78
SMARCAL1-213ENST00000496037 DEPDC7Q96QD5 511 aa10.2□□□□□ -0.78
SMARCAL1-213ENST00000496037 POLR1BQ9H9Y6 1135 aa10.2□□□□□ -0.78
SMARCAL1-213ENST00000496037 C17orf75Q9HAS0 396 aa10.2□□□□□ -0.78
SMARCAL1-213ENST00000496037 BRMS1Q9HCU9 246 aa10.2□□□□□ -0.78
SMARCAL1-213ENST00000496037 GTF3C4Q9UKN8 822 aa10.2□□□□□ -0.78
SMARCAL1-213ENST00000496037 DERAQ9Y315 318 aa10.2□□□□□ -0.78
SMARCAL1-213ENST00000496037 NPC1O15118 1278 aa10.19□□□□□ -0.78
SMARCAL1-213ENST00000496037 VILLO15195 856 aa10.19□□□□□ -0.78
SMARCAL1-213ENST00000496037 CACNG3O60359 315 aa10.19□□□□□ -0.78
SMARCAL1-213ENST00000496037 USP12O75317 370 aa10.19□□□□□ -0.78
SMARCAL1-213ENST00000496037 PPFIA2O75334 1257 aa10.19□□□□□ -0.78
SMARCAL1-213ENST00000496037 NEFLP07196 543 aa10.19□□□□□ -0.78
SMARCAL1-213ENST00000496037 TYRP14679 529 aa10.19□□□□□ -0.78
SMARCAL1-213ENST00000496037 MUTP22033 750 aa10.19□□□□□ -0.78
SMARCAL1-213ENST00000496037 RBMS1P29558 406 aaKnown RBP10.19□□□□□ -0.78
SMARCAL1-213ENST00000496037 MAGEA11P43364 429 aa10.19□□□□□ -0.78
SMARCAL1-213ENST00000496037 DGKGP49619 791 aa10.19□□□□□ -0.78
SMARCAL1-213ENST00000496037 SMTNP53814 917 aa10.19□□□□□ -0.78
SMARCAL1-213ENST00000496037 BCAT1P54687 386 aa10.19□□□□□ -0.78
SMARCAL1-213ENST00000496037 ST3GAL1Q11201 340 aa10.19□□□□□ -0.78
SMARCAL1-213ENST00000496037 PRAMEF14Q5SWL7 426 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms