RNA–Protein interactions for RNA: ENST00000495293.5

RBM39-240, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 759 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-240ENST00000495293 USP7Q93009 1102 aa5.04□□□□□ -1.6
RBM39-240ENST00000495293 PHKBQ93100 1093 aa5.04□□□□□ -1.6
RBM39-240ENST00000495293 SYAP1Q96A49 352 aaPredicted RBP5.04□□□□□ -1.6
RBM39-240ENST00000495293 ZSCAN31Q96LW9 406 aaPredicted RBP5.04□□□□□ -1.6
RBM39-240ENST00000495293 LBHD1Q9BQE6 289 aaPredicted RBP5.04□□□□□ -1.6
RBM39-240ENST00000495293 UPF3AQ9H1J1 476 aaKnown RBP5.04□□□□□ -1.6
RBM39-240ENST00000495293 RIC8AQ9NPQ8 531 aa5.04□□□□□ -1.6
RBM39-240ENST00000495293 SH3GLB2Q9NR46 395 aa5.04□□□□□ -1.6
RBM39-240ENST00000495293 TOPORSQ9NS56 1045 aaPredicted RBP5.04□□□□□ -1.6
RBM39-240ENST00000495293 COL20A1Q9P218 1284 aa5.04□□□□□ -1.6
RBM39-240ENST00000495293 TMPRSS11EQ9UL52 423 aa5.04□□□□□ -1.6
RBM39-240ENST00000495293 PCDHA6Q9UN73 950 aa5.04□□□□□ -1.6
RBM39-240ENST00000495293 SORCS3Q9UPU3 1222 aa5.04□□□□□ -1.6
RBM39-240ENST00000495293 ATP11BQ9Y2G3 1177 aa5.04□□□□□ -1.6
RBM39-240ENST00000495293 PCDHB6Q9Y5E3 794 aa5.04□□□□□ -1.6
RBM39-240ENST00000495293 DDX49Q9Y6V7 483 aaKnown RBP5.04□□□□□ -1.6
RBM39-240ENST00000495293 COL4A3Q01955 1670 aa5.04□□□□□ -1.6
RBM39-240ENST00000495293 SMCHD1A6NHR9 2005 aa5.04□□□□□ -1.6
RBM39-240ENST00000495293 BAZ2BQ9UIF8 2168 aaKnown RBP5.04□□□□□ -1.6
RBM39-240ENST00000495293 ASTN1O14525 1302 aa5.03□□□□□ -1.6
RBM39-240ENST00000495293 FRMPD3Q5JV73 1810 aa5.03□□□□□ -1.6
RBM39-240ENST00000495293 AHRRA9YTQ3 701 aa5.03□□□□□ -1.6
RBM39-240ENST00000495293 MEIS2O14770 477 aa5.03□□□□□ -1.6
RBM39-240ENST00000495293 MTSS1O43312 755 aa5.03□□□□□ -1.6
RBM39-240ENST00000495293 FIBPO43427 364 aa5.03□□□□□ -1.6
RBM39-240ENST00000495293 LPXNO60711 386 aa5.03□□□□□ -1.6
RBM39-240ENST00000495293 PFKFB2O60825 505 aa5.03□□□□□ -1.6
RBM39-240ENST00000495293 PQBP1O60828 265 aaKnown RBP5.03□□□□□ -1.6
RBM39-240ENST00000495293 SUPT20HL2P0C7V6 817 aa5.03□□□□□ -1.6
RBM39-240ENST00000495293 PTGS2P35354 604 aa5.03□□□□□ -1.6
RBM39-240ENST00000495293 IL12RB1P42701 662 aa5.03□□□□□ -1.6
RBM39-240ENST00000495293 EPHB1P54762 984 aa5.03□□□□□ -1.6
RBM39-240ENST00000495293 BEX3Q00994 111 aa5.03□□□□□ -1.6
RBM39-240ENST00000495293 MTMR1Q13613 665 aa5.03□□□□□ -1.6
RBM39-240ENST00000495293 UBE2SQ16763 222 aa5.03□□□□□ -1.6
RBM39-240ENST00000495293 LY6KQ17RY6 165 aa5.03□□□□□ -1.6
RBM39-240ENST00000495293 SLC35G1Q2M3R5 365 aa5.03□□□□□ -1.6
RBM39-240ENST00000495293 GLIPR1L2Q4G1C9 344 aa5.03□□□□□ -1.6
RBM39-240ENST00000495293 CT83Q5H943 113 aa5.03□□□□□ -1.6
RBM39-240ENST00000495293 GPR158Q5T848 1215 aa5.03□□□□□ -1.6
RBM39-240ENST00000495293 JAKMIP3Q5VZ66 844 aa5.03□□□□□ -1.6
RBM39-240ENST00000495293 GALNT17Q6IS24 598 aa5.03□□□□□ -1.6
RBM39-240ENST00000495293 LRRC55Q6ZSA7 311 aa5.03□□□□□ -1.6
RBM39-240ENST00000495293 CLRN3Q8NCR9 226 aa5.03□□□□□ -1.6
RBM39-240ENST00000495293 KLHDC9Q8NEP7 349 aa5.03□□□□□ -1.6
RBM39-240ENST00000495293 ATL2Q8NHH9 583 aa5.03□□□□□ -1.6
RBM39-240ENST00000495293 TNPO1Q92973 898 aaKnown RBP5.03□□□□□ -1.6
RBM39-240ENST00000495293 ARL8AQ96BM9 186 aa5.03□□□□□ -1.6
RBM39-240ENST00000495293 HIST1H2AHQ96KK5 128 aa5.03□□□□□ -1.6
RBM39-240ENST00000495293 SPATA33Q96N06 139 aa5.03□□□□□ -1.6
RBM39-240ENST00000495293 HIST1H2AJQ99878 128 aa5.03□□□□□ -1.6
RBM39-240ENST00000495293 MTG1Q9BT17 334 aaPredicted RBP5.03□□□□□ -1.6
RBM39-240ENST00000495293 KATNAL1Q9BW62 490 aa5.03□□□□□ -1.6
RBM39-240ENST00000495293 LSM14BQ9BX40 385 aaKnown RBP5.03□□□□□ -1.6
RBM39-240ENST00000495293 GRPEL1Q9HAV7 217 aa5.03□□□□□ -1.6
RBM39-240ENST00000495293 TPCN1Q9ULQ1 816 aa5.03□□□□□ -1.6
RBM39-240ENST00000495293 LIMCH1Q9UPQ0 1083 aa5.03□□□□□ -1.6
RBM39-240ENST00000495293 MCM3APO60318 1980 aa5.03□□□□□ -1.6
RBM39-240ENST00000495293 NID2Q14112 1375 aa5.03□□□□□ -1.6
RBM39-240ENST00000495293 ESYT2A0FGR8 921 aa5.02□□□□□ -1.61
RBM39-240ENST00000495293 TMEM191CA6NGB0 347 aa5.02□□□□□ -1.61
RBM39-240ENST00000495293 GOLGA6L6A8MZA4 724 aa5.02□□□□□ -1.61
RBM39-240ENST00000495293 H0YGN5 161 aa5.02□□□□□ -1.61
RBM39-240ENST00000495293 TSPAN6O43657 245 aa5.02□□□□□ -1.61
RBM39-240ENST00000495293 PPFIA4O75335 1185 aa5.02□□□□□ -1.61
RBM39-240ENST00000495293 LY86O95711 162 aa5.02□□□□□ -1.61
RBM39-240ENST00000495293 GGPS1O95749 300 aa5.02□□□□□ -1.61
RBM39-240ENST00000495293 CLTBP09497 229 aa5.02□□□□□ -1.61
RBM39-240ENST00000495293 ICAM3P32942 547 aa5.02□□□□□ -1.61
RBM39-240ENST00000495293 GUCY2FP51841 1108 aa5.02□□□□□ -1.61
RBM39-240ENST00000495293 OCRLQ01968 901 aa5.02□□□□□ -1.61
RBM39-240ENST00000495293 TLE2Q04725 743 aa5.02□□□□□ -1.61
RBM39-240ENST00000495293 CCDC173Q0VFZ6 552 aa5.02□□□□□ -1.61
RBM39-240ENST00000495293 ITGA7Q13683 1181 aa5.02□□□□□ -1.61
RBM39-240ENST00000495293 SAFBQ15424 915 aaKnown RBP eCLIP5.02□□□□□ -1.61
RBM39-240ENST00000495293 LRRC26Q2I0M4 334 aa5.02□□□□□ -1.61
RBM39-240ENST00000495293 TRIM60Q495X7 471 aa5.02□□□□□ -1.61
RBM39-240ENST00000495293 PITRM1Q5JRX3 1037 aa5.02□□□□□ -1.61
RBM39-240ENST00000495293 CELF3Q5SZQ8 465 aaKnown RBP5.02□□□□□ -1.61
RBM39-240ENST00000495293 CCSAPQ6IQ19 270 aaPredicted RBP5.02□□□□□ -1.61
RBM39-240ENST00000495293 MFSD5Q6N075 450 aa5.02□□□□□ -1.61
RBM39-240ENST00000495293 DPY19L2P1Q6NXN4 242 aa5.02□□□□□ -1.61
RBM39-240ENST00000495293 CXCL17Q6UXB2 119 aa5.02□□□□□ -1.61
RBM39-240ENST00000495293 C11orf74Q86VG3 221 aa5.02□□□□□ -1.61
RBM39-240ENST00000495293 WDR75Q8IWA0 830 aaKnown RBP5.02□□□□□ -1.61
RBM39-240ENST00000495293 CDYL2Q8N8U2 506 aa5.02□□□□□ -1.61
RBM39-240ENST00000495293 FAM184AQ8NB25 1140 aa5.02□□□□□ -1.61
RBM39-240ENST00000495293 PPTC7Q8NI37 304 aa5.02□□□□□ -1.61
RBM39-240ENST00000495293 CPT1CQ8TCG5 803 aa5.02□□□□□ -1.61
RBM39-240ENST00000495293 PROKR1Q8TCW9 393 aa5.02□□□□□ -1.61
RBM39-240ENST00000495293 AFG1LQ8WV93 481 aa5.02□□□□□ -1.61
RBM39-240ENST00000495293 VOPP1Q96AW1 172 aa5.02□□□□□ -1.61
RBM39-240ENST00000495293 IL17RAQ96F46 866 aa5.02□□□□□ -1.61
RBM39-240ENST00000495293 NAP1L5Q96NT1 182 aaPredicted RBP5.02□□□□□ -1.61
RBM39-240ENST00000495293 UIMC1Q96RL1 719 aa5.02□□□□□ -1.61
RBM39-240ENST00000495293 SENP7Q9BQF6 1050 aa5.02□□□□□ -1.61
RBM39-240ENST00000495293 SDF4Q9BRK5 362 aa5.02□□□□□ -1.61
RBM39-240ENST00000495293 ZMYND12Q9H0C1 365 aa5.02□□□□□ -1.61
RBM39-240ENST00000495293 PRDM13Q9H4Q3 707 aa5.02□□□□□ -1.61
RBM39-240ENST00000495293 VPS54Q9P1Q0 977 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms