RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 CAPN9O14815 690 aa18.43■□□□□ 0.54
HDAC4-211ENST00000494800 CACNG3O60359 315 aa18.43■□□□□ 0.54
HDAC4-211ENST00000494800 NCAM1P13591 858 aa18.43■□□□□ 0.54
HDAC4-211ENST00000494800 RPL34P49207 117 aaKnown RBP18.43■□□□□ 0.54
HDAC4-211ENST00000494800 FNTBP49356 437 aa18.43■□□□□ 0.54
HDAC4-211ENST00000494800 DMC1Q14565 340 aa18.43■□□□□ 0.54
HDAC4-211ENST00000494800 KLHDC7AQ5VTJ3 777 aa18.43■□□□□ 0.54
HDAC4-211ENST00000494800 PKN3Q6P5Z2 889 aa18.43■□□□□ 0.54
HDAC4-211ENST00000494800 C11orf57Q6ZUT1 292 aaPredicted RBP18.43■□□□□ 0.54
HDAC4-211ENST00000494800 SCUBE3Q8IX30 993 aa18.43■□□□□ 0.54
HDAC4-211ENST00000494800 KCNV2Q8TDN2 545 aa18.43■□□□□ 0.54
HDAC4-211ENST00000494800 USP33Q8TEY7 942 aa18.43■□□□□ 0.54
HDAC4-211ENST00000494800 EZH1Q92800 747 aaPredicted RBP18.43■□□□□ 0.54
HDAC4-211ENST00000494800 FAM149B1Q96BN6 582 aa18.43■□□□□ 0.54
HDAC4-211ENST00000494800 VPS16Q9H269 839 aa18.43■□□□□ 0.54
HDAC4-211ENST00000494800 AGO1Q9UL18 857 aaKnown RBP18.43■□□□□ 0.54
HDAC4-211ENST00000494800 PCDHGC3Q9UN70 934 aa18.43■□□□□ 0.54
HDAC4-211ENST00000494800 CACNA1IQ9P0X4 2223 aa18.43■□□□□ 0.54
HDAC4-211ENST00000494800 PIEZO1Q92508 2521 aa18.42■□□□□ 0.54
HDAC4-211ENST00000494800 FOXN3O00409 490 aaPredicted RBP18.42■□□□□ 0.54
HDAC4-211ENST00000494800 APBB3O95704 486 aa18.42■□□□□ 0.54
HDAC4-211ENST00000494800 LATS1O95835 1130 aa18.42■□□□□ 0.54
HDAC4-211ENST00000494800 KLKB1P03952 638 aa18.42■□□□□ 0.54
HDAC4-211ENST00000494800 ZNF445P59923 1031 aa18.42■□□□□ 0.54
HDAC4-211ENST00000494800 TYRO3Q06418 890 aa18.42■□□□□ 0.54
HDAC4-211ENST00000494800 PDCLQ13371 301 aa18.42■□□□□ 0.54
HDAC4-211ENST00000494800 KRT31Q15323 416 aa18.42■□□□□ 0.54
HDAC4-211ENST00000494800 TRIP4Q15650 581 aaPredicted RBP18.42■□□□□ 0.54
HDAC4-211ENST00000494800 MSANTD2Q6P1R3 559 aa18.42■□□□□ 0.54
HDAC4-211ENST00000494800 WDR5BQ86VZ2 330 aa18.42■□□□□ 0.54
HDAC4-211ENST00000494800 UNC45BQ8IWX7 931 aa18.42■□□□□ 0.54
HDAC4-211ENST00000494800 TERB1Q8NA31 727 aa18.42■□□□□ 0.54
HDAC4-211ENST00000494800 RUBCNQ92622 972 aa18.42■□□□□ 0.54
HDAC4-211ENST00000494800 SLC4A5Q9BY07 1137 aa18.42■□□□□ 0.54
HDAC4-211ENST00000494800 LHX5Q9H2C1 402 aa18.42■□□□□ 0.54
HDAC4-211ENST00000494800 ACP6Q9NPH0 428 aa18.42■□□□□ 0.54
HDAC4-211ENST00000494800 PLCB1Q9NQ66 1216 aa18.42■□□□□ 0.54
HDAC4-211ENST00000494800 C2orf42Q9NWW7 574 aa18.42■□□□□ 0.54
HDAC4-211ENST00000494800 NCDNQ9UBB6 729 aa18.42■□□□□ 0.54
HDAC4-211ENST00000494800 SFMBT1Q9UHJ3 866 aa18.42■□□□□ 0.54
HDAC4-211ENST00000494800 SMG5Q9UPR3 1016 aaKnown RBP18.42■□□□□ 0.54
HDAC4-211ENST00000494800 DAAM1Q9Y4D1 1078 aa18.42■□□□□ 0.54
HDAC4-211ENST00000494800 UCHL3P15374 230 aa18.41■□□□□ 0.54
HDAC4-211ENST00000494800 PTMSP20962 102 aa18.41■□□□□ 0.54
HDAC4-211ENST00000494800 DGKGP49619 791 aa18.41■□□□□ 0.54
HDAC4-211ENST00000494800 KCNMA1Q12791 1236 aa18.41■□□□□ 0.54
HDAC4-211ENST00000494800 DRAP1Q14919 205 aaPredicted RBP18.41■□□□□ 0.54
HDAC4-211ENST00000494800 EOGTQ5NDL2 527 aa18.41■□□□□ 0.54
HDAC4-211ENST00000494800 C10orf76Q5T2E6 689 aa18.41■□□□□ 0.54
HDAC4-211ENST00000494800 NUGGCQ68CJ6 796 aa18.41■□□□□ 0.54
HDAC4-211ENST00000494800 CAVIN1Q6NZI2 390 aaKnown RBP18.41■□□□□ 0.54
HDAC4-211ENST00000494800 PRR23BQ6ZRT6 265 aa18.41■□□□□ 0.54
HDAC4-211ENST00000494800 BEND5Q7L4P6 421 aa18.41■□□□□ 0.54
HDAC4-211ENST00000494800 TMEM110Q86TL2 294 aa18.41■□□□□ 0.54
HDAC4-211ENST00000494800 FAM71AQ8IYT1 594 aa18.41■□□□□ 0.54
HDAC4-211ENST00000494800 CPXM2Q8N436 756 aa18.41■□□□□ 0.54
HDAC4-211ENST00000494800 TSTD1Q8NFU3 115 aa18.41■□□□□ 0.54
HDAC4-211ENST00000494800 CLEC4CQ8WTT0 213 aa18.41■□□□□ 0.54
HDAC4-211ENST00000494800 BHMTQ93088 406 aa18.41■□□□□ 0.54
HDAC4-211ENST00000494800 SERPINB11Q96P15 392 aa18.41■□□□□ 0.54
HDAC4-211ENST00000494800 SYNCQ9H7C4 482 aa18.41■□□□□ 0.54
HDAC4-211ENST00000494800 TMEM63CQ9P1W3 806 aa18.41■□□□□ 0.54
HDAC4-211ENST00000494800 MMP17Q9ULZ9 603 aa18.41■□□□□ 0.54
HDAC4-211ENST00000494800 FHOD1Q9Y613 1164 aa18.41■□□□□ 0.54
HDAC4-211ENST00000494800 MYO15AQ9UKN7 3530 aa18.4■□□□□ 0.54
HDAC4-211ENST00000494800 E5RJQ4 531 aa18.4■□□□□ 0.54
HDAC4-211ENST00000494800 GABBR2O75899 941 aa18.4■□□□□ 0.54
HDAC4-211ENST00000494800 ALDH1A2O94788 518 aa18.4■□□□□ 0.54
HDAC4-211ENST00000494800 TIE1P35590 1138 aa18.4■□□□□ 0.54
HDAC4-211ENST00000494800 SLC11A2P49281 568 aa18.4■□□□□ 0.54
HDAC4-211ENST00000494800 DGKEP52429 567 aa18.4■□□□□ 0.54
HDAC4-211ENST00000494800 DMWDQ09019 674 aa18.4■□□□□ 0.54
HDAC4-211ENST00000494800 SIM2Q14190 667 aaPredicted RBP18.4■□□□□ 0.54
HDAC4-211ENST00000494800 E2F5Q15329 346 aa18.4■□□□□ 0.54
HDAC4-211ENST00000494800 SDE2Q6IQ49 451 aa18.4■□□□□ 0.54
HDAC4-211ENST00000494800 CEP68Q76N32 757 aa18.4■□□□□ 0.54
HDAC4-211ENST00000494800 SLC47A2Q86VL8 602 aa18.4■□□□□ 0.54
HDAC4-211ENST00000494800 PASD1Q8IV76 773 aa18.4■□□□□ 0.54
HDAC4-211ENST00000494800 PHTF2Q8N3S3 785 aa18.4■□□□□ 0.54
HDAC4-211ENST00000494800 SUMF1Q8NBK3 374 aa18.4■□□□□ 0.54
HDAC4-211ENST00000494800 IPO4Q8TEX9 1081 aaKnown RBP18.4■□□□□ 0.54
HDAC4-211ENST00000494800 DDI1Q8WTU0 396 aa18.4■□□□□ 0.54
HDAC4-211ENST00000494800 PPP1R13BQ96KQ4 1090 aa18.4■□□□□ 0.54
HDAC4-211ENST00000494800 PCMTD1Q96MG8 357 aaPredicted RBP18.4■□□□□ 0.54
HDAC4-211ENST00000494800 HHIPQ96QV1 700 aa18.4■□□□□ 0.54
HDAC4-211ENST00000494800 STK33Q9BYT3 514 aa18.4■□□□□ 0.54
HDAC4-211ENST00000494800 POPDC2Q9HBU9 364 aa18.4■□□□□ 0.54
HDAC4-211ENST00000494800 AJAP1Q9UKB5 411 aaPredicted RBP18.4■□□□□ 0.54
HDAC4-211ENST00000494800 GMEB2Q9UKD1 530 aa18.4■□□□□ 0.54
HDAC4-211ENST00000494800 MSI1O43347 362 aaKnown RBP18.39■□□□□ 0.53
HDAC4-211ENST00000494800 KLF8O95600 359 aaPredicted RBP18.39■□□□□ 0.53
HDAC4-211ENST00000494800 PENKP01210 267 aaPredicted RBP18.39■□□□□ 0.53
HDAC4-211ENST00000494800 CLCN1P35523 988 aa18.39■□□□□ 0.53
HDAC4-211ENST00000494800 COPB1P53618 953 aaKnown RBP18.39■□□□□ 0.53
HDAC4-211ENST00000494800 TBX4P57082 545 aa18.39■□□□□ 0.53
HDAC4-211ENST00000494800 YWHAZP63104 245 aaKnown RBP18.39■□□□□ 0.53
HDAC4-211ENST00000494800 RING1Q06587 406 aa18.39■□□□□ 0.53
HDAC4-211ENST00000494800 NNTQ13423 1086 aa18.39■□□□□ 0.53
HDAC4-211ENST00000494800 MPPE1Q53F39 396 aa18.39■□□□□ 0.53
HDAC4-211ENST00000494800 CCDC33Q8N5R6 958 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms