RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 FCGRTP55899 365 aa10.79□□□□□ -0.68
SAMM50-206ENST00000494795 MRPS5P82675 430 aaKnown RBP10.79□□□□□ -0.68
SAMM50-206ENST00000494795 CAV1Q03135 178 aa10.79□□□□□ -0.68
SAMM50-206ENST00000494795 LMNB2Q03252 620 aa10.79□□□□□ -0.68
SAMM50-206ENST00000494795 DSTYKQ6XUX3 929 aa10.79□□□□□ -0.68
SAMM50-206ENST00000494795 NME8Q8N427 588 aa10.79□□□□□ -0.68
SAMM50-206ENST00000494795 FAF2Q96CS3 445 aa10.79□□□□□ -0.68
SAMM50-206ENST00000494795 ELAC2Q9BQ52 826 aaKnown RBP10.79□□□□□ -0.68
SAMM50-206ENST00000494795 SYT15Q9BQS2 421 aa10.79□□□□□ -0.68
SAMM50-206ENST00000494795 FGFR1OP2Q9NVK5 253 aa10.79□□□□□ -0.68
SAMM50-206ENST00000494795 USP3Q9Y6I4 520 aa10.79□□□□□ -0.68
SAMM50-206ENST00000494795 TCP11X1B4DZS4 312 aa10.79□□□□□ -0.68
SAMM50-206ENST00000494795 M0QZ92 97 aa10.79□□□□□ -0.68
SAMM50-206ENST00000494795 TRPA1O75762 1119 aa10.79□□□□□ -0.68
SAMM50-206ENST00000494795 RPL34P49207 117 aaKnown RBP10.79□□□□□ -0.68
SAMM50-206ENST00000494795 KCNJ11Q14654 390 aa10.79□□□□□ -0.68
SAMM50-206ENST00000494795 MFSD14CQ5VZR4 134 aa10.79□□□□□ -0.68
SAMM50-206ENST00000494795 BHLHA9Q7RTU4 235 aa10.79□□□□□ -0.68
SAMM50-206ENST00000494795 CAND1Q86VP6 1230 aaKnown RBP10.79□□□□□ -0.68
SAMM50-206ENST00000494795 PYROXD1Q8WU10 500 aa10.79□□□□□ -0.68
SAMM50-206ENST00000494795 CHMP6Q96FZ7 201 aa10.79□□□□□ -0.68
SAMM50-206ENST00000494795 ALG13Q9NP73 1137 aaKnown RBP10.79□□□□□ -0.68
SAMM50-206ENST00000494795 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.79□□□□□ -0.68
SAMM50-206ENST00000494795 EFR3BQ9Y2G0 817 aa10.79□□□□□ -0.68
SAMM50-206ENST00000494795 KBTBD13C9JR72 458 aa10.79□□□□□ -0.68
SAMM50-206ENST00000494795 XPO1O14980 1071 aaKnown RBP10.79□□□□□ -0.68
SAMM50-206ENST00000494795 VIMP08670 466 aaKnown RBP10.79□□□□□ -0.68
SAMM50-206ENST00000494795 RPA3P35244 121 aaPredicted RBP10.79□□□□□ -0.68
SAMM50-206ENST00000494795 GMPRP36959 345 aa10.79□□□□□ -0.68
SAMM50-206ENST00000494795 MATKP42679 507 aa10.79□□□□□ -0.68
SAMM50-206ENST00000494795 ACAP1Q15027 740 aa10.79□□□□□ -0.68
SAMM50-206ENST00000494795 BOLA3Q53S33 107 aa10.79□□□□□ -0.68
SAMM50-206ENST00000494795 CGB2Q6NT52 195 aa10.79□□□□□ -0.68
SAMM50-206ENST00000494795 CPLX4Q7Z7G2 160 aa10.79□□□□□ -0.68
SAMM50-206ENST00000494795 FAM35AQ86V20 835 aa10.79□□□□□ -0.68
SAMM50-206ENST00000494795 RELL1Q8IUW5 271 aa10.79□□□□□ -0.68
SAMM50-206ENST00000494795 SLC7A14Q8TBB6 771 aa10.79□□□□□ -0.68
SAMM50-206ENST00000494795 CD99L2Q8TCZ2 262 aa10.79□□□□□ -0.68
SAMM50-206ENST00000494795 ROPN1BQ9BZX4 212 aaPredicted RBP10.79□□□□□ -0.68
SAMM50-206ENST00000494795 ROPN1Q9HAT0 212 aaPredicted RBP10.79□□□□□ -0.68
SAMM50-206ENST00000494795 TMEM51Q9NW97 253 aa10.79□□□□□ -0.68
SAMM50-206ENST00000494795 MAGED2Q9UNF1 606 aaPredicted RBP10.79□□□□□ -0.68
SAMM50-206ENST00000494795 SHOC2Q9UQ13 582 aa10.79□□□□□ -0.68
SAMM50-206ENST00000494795 HHLA1C9JL84 531 aa10.78□□□□□ -0.68
SAMM50-206ENST00000494795 YWHAZP63104 245 aaKnown RBP10.78□□□□□ -0.68
SAMM50-206ENST00000494795 STILQ15468 1287 aa10.78□□□□□ -0.68
SAMM50-206ENST00000494795 SLC1A5Q15758 541 aa10.78□□□□□ -0.68
SAMM50-206ENST00000494795 DPYSL2Q16555 572 aa10.78□□□□□ -0.68
SAMM50-206ENST00000494795 DENND5BQ6ZUT9 1274 aa10.78□□□□□ -0.68
SAMM50-206ENST00000494795 FAM47EQ6ZV65 393 aa10.78□□□□□ -0.68
SAMM50-206ENST00000494795 CENPUQ71F23 418 aa10.78□□□□□ -0.68
SAMM50-206ENST00000494795 ZNF534Q76KX8 674 aa10.78□□□□□ -0.68
SAMM50-206ENST00000494795 SPNS2Q8IVW8 549 aa10.78□□□□□ -0.68
SAMM50-206ENST00000494795 TOP6BLQ8N6T0 577 aa10.78□□□□□ -0.68
SAMM50-206ENST00000494795 STK32AQ8WU08 396 aa10.78□□□□□ -0.68
SAMM50-206ENST00000494795 CFAP36Q96G28 342 aa10.78□□□□□ -0.68
SAMM50-206ENST00000494795 SLCO1B3Q9NPD5 702 aa10.78□□□□□ -0.68
SAMM50-206ENST00000494795 SMYD2Q9NRG4 433 aa10.78□□□□□ -0.68
SAMM50-206ENST00000494795 TOP3BO95985 862 aaKnown RBP10.78□□□□□ -0.68
SAMM50-206ENST00000494795 PBX3P40426 434 aa10.78□□□□□ -0.68
SAMM50-206ENST00000494795 PTPN9P43378 593 aa10.78□□□□□ -0.68
SAMM50-206ENST00000494795 GATMP50440 423 aa10.78□□□□□ -0.68
SAMM50-206ENST00000494795 ITGA7Q13683 1181 aa10.78□□□□□ -0.68
SAMM50-206ENST00000494795 SPARCL1Q14515 664 aa10.78□□□□□ -0.68
SAMM50-206ENST00000494795 RNF187Q5TA31 235 aaPredicted RBP10.78□□□□□ -0.68
SAMM50-206ENST00000494795 TRMT10BQ6PF06 316 aaKnown RBP10.78□□□□□ -0.68
SAMM50-206ENST00000494795 C6orf89Q6UWU4 347 aa10.78□□□□□ -0.68
SAMM50-206ENST00000494795 APBB1IPQ7Z5R6 666 aaPredicted RBP10.78□□□□□ -0.68
SAMM50-206ENST00000494795 TRABD2AQ86V40 505 aa10.78□□□□□ -0.68
SAMM50-206ENST00000494795 KLHDC9Q8NEP7 349 aa10.78□□□□□ -0.68
SAMM50-206ENST00000494795 GPR152Q8TDT2 470 aa10.78□□□□□ -0.68
SAMM50-206ENST00000494795 LINC01599Q8WXQ3 324 aa10.78□□□□□ -0.68
SAMM50-206ENST00000494795 MYLPFQ96A32 169 aa10.78□□□□□ -0.68
SAMM50-206ENST00000494795 ARHGEF4Q9NR80 690 aa10.78□□□□□ -0.68
SAMM50-206ENST00000494795 ZMYND8Q9ULU4 1186 aaPredicted RBP10.78□□□□□ -0.68
SAMM50-206ENST00000494795 FZD10Q9ULW2 581 aa10.78□□□□□ -0.68
SAMM50-206ENST00000494795 A0A087WUV0 522 aaPredicted RBP10.77□□□□□ -0.68
SAMM50-206ENST00000494795 KCNK1O00180 336 aa10.77□□□□□ -0.68
SAMM50-206ENST00000494795 DNM1LO00429 736 aa10.77□□□□□ -0.68
SAMM50-206ENST00000494795 MDM4O15151 490 aa10.77□□□□□ -0.68
SAMM50-206ENST00000494795 CDH16O75309 829 aa10.77□□□□□ -0.68
SAMM50-206ENST00000494795 DDHD2O94830 711 aa10.77□□□□□ -0.68
SAMM50-206ENST00000494795 ZBED1O96006 694 aa10.77□□□□□ -0.68
SAMM50-206ENST00000494795 PNPLA4P41247 253 aa10.77□□□□□ -0.68
SAMM50-206ENST00000494795 GPR15P49685 360 aa10.77□□□□□ -0.68
SAMM50-206ENST00000494795 KBTBD12Q3ZCT8 623 aa10.77□□□□□ -0.68
SAMM50-206ENST00000494795 NPWQ8N729 165 aa10.77□□□□□ -0.68
SAMM50-206ENST00000494795 TTC13Q8NBP0 860 aa10.77□□□□□ -0.68
SAMM50-206ENST00000494795 BBOF1Q8ND07 529 aa10.77□□□□□ -0.68
SAMM50-206ENST00000494795 TNIP3Q96KP6 325 aa10.77□□□□□ -0.68
SAMM50-206ENST00000494795 UPF3AQ9H1J1 476 aaKnown RBP10.77□□□□□ -0.68
SAMM50-206ENST00000494795 LRRC4Q9HBW1 653 aa10.77□□□□□ -0.68
SAMM50-206ENST00000494795 SEPT10Q9P0V9 454 aa10.77□□□□□ -0.68
SAMM50-206ENST00000494795 DNAJB4Q9UDY4 337 aa10.77□□□□□ -0.68
SAMM50-206ENST00000494795 TET1Q8NFU7 2136 aa10.77□□□□□ -0.69
SAMM50-206ENST00000494795 TCRBV9S1A1TA0A576 114 aa10.77□□□□□ -0.69
SAMM50-206ENST00000494795 WDR91A4D1P6 747 aa10.77□□□□□ -0.69
SAMM50-206ENST00000494795 SETSIPP0DME0 302 aa10.77□□□□□ -0.69
SAMM50-206ENST00000494795 NCAM1P13591 858 aa10.77□□□□□ -0.69
SAMM50-206ENST00000494795 KRT15P19012 456 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms