RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 C4orf50Q6ZRC1 276 aa12.41□□□□□ -0.42
CSNK1E-212ENST00000494610 C11orf74Q86VG3 221 aa12.41□□□□□ -0.42
CSNK1E-212ENST00000494610 TMEM25Q86YD3 366 aa12.41□□□□□ -0.42
CSNK1E-212ENST00000494610 MARCH9Q86YJ5 346 aa12.41□□□□□ -0.42
CSNK1E-212ENST00000494610 BBS7Q8IWZ6 715 aa12.41□□□□□ -0.42
CSNK1E-212ENST00000494610 DRC7Q8IY82 874 aa12.41□□□□□ -0.42
CSNK1E-212ENST00000494610 MINDY1Q8N5J2 469 aa12.41□□□□□ -0.42
CSNK1E-212ENST00000494610 SPACA7Q96KW9 195 aa12.41□□□□□ -0.42
CSNK1E-212ENST00000494610 KCNK16Q96T55 309 aa12.41□□□□□ -0.42
CSNK1E-212ENST00000494610 TTLL2Q9BWV7 592 aa12.41□□□□□ -0.42
CSNK1E-212ENST00000494610 SLC32A1Q9H598 525 aa12.41□□□□□ -0.42
CSNK1E-212ENST00000494610 CCSER2Q9H7U1 834 aa12.41□□□□□ -0.42
CSNK1E-212ENST00000494610 CAPN10Q9HC96 672 aa12.41□□□□□ -0.42
CSNK1E-212ENST00000494610 POLMQ9NP87 494 aaPredicted RBP12.41□□□□□ -0.42
CSNK1E-212ENST00000494610 INTS13Q9NVM9 706 aa12.41□□□□□ -0.42
CSNK1E-212ENST00000494610 CALCOCO1Q9P1Z2 691 aa12.41□□□□□ -0.42
CSNK1E-212ENST00000494610 IMPACTQ9P2X3 320 aa12.41□□□□□ -0.42
CSNK1E-212ENST00000494610 CDH9Q9ULB4 789 aa12.41□□□□□ -0.42
CSNK1E-212ENST00000494610 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.41□□□□□ -0.42
CSNK1E-212ENST00000494610 KALRNO60229 2985 aa12.41□□□□□ -0.42
CSNK1E-212ENST00000494610 APC2O95996 2303 aa12.4□□□□□ -0.42
CSNK1E-212ENST00000494610 TBC1D3BA6NDS4 549 aa12.4□□□□□ -0.42
CSNK1E-212ENST00000494610 TMEM8BA6NDV4 472 aa12.4□□□□□ -0.42
CSNK1E-212ENST00000494610 COCHO43405 550 aa12.4□□□□□ -0.42
CSNK1E-212ENST00000494610 NRDCO43847 1150 aa12.4□□□□□ -0.42
CSNK1E-212ENST00000494610 SH3BP5O60239 455 aa12.4□□□□□ -0.42
CSNK1E-212ENST00000494610 TULP3O75386 442 aa12.4□□□□□ -0.42
CSNK1E-212ENST00000494610 ZIC2O95409 532 aaPredicted RBP12.4□□□□□ -0.42
CSNK1E-212ENST00000494610 WARSP23381 471 aaKnown RBP12.4□□□□□ -0.42
CSNK1E-212ENST00000494610 ANXA13P27216 316 aa12.4□□□□□ -0.42
CSNK1E-212ENST00000494610 GRIA2P42262 883 aa12.4□□□□□ -0.42
CSNK1E-212ENST00000494610 CASP4P49662 377 aa12.4□□□□□ -0.42
CSNK1E-212ENST00000494610 GSDMDP57764 484 aa12.4□□□□□ -0.42
CSNK1E-212ENST00000494610 MCCD1P59942 119 aaPredicted RBP12.4□□□□□ -0.42
CSNK1E-212ENST00000494610 PSMD6Q15008 389 aa12.4□□□□□ -0.42
CSNK1E-212ENST00000494610 EOGTQ5NDL2 527 aa12.4□□□□□ -0.42
CSNK1E-212ENST00000494610 EGFLAMQ63HQ2 1017 aa12.4□□□□□ -0.42
CSNK1E-212ENST00000494610 SPECC1LQ69YQ0 1117 aa12.4□□□□□ -0.42
CSNK1E-212ENST00000494610 VSTM1Q6UX27 236 aa12.4□□□□□ -0.42
CSNK1E-212ENST00000494610 APTXQ7Z2E3 356 aaKnown RBP12.4□□□□□ -0.42
CSNK1E-212ENST00000494610 RDH13Q8NBN7 331 aa12.4□□□□□ -0.42
CSNK1E-212ENST00000494610 SCAMP5Q8TAC9 235 aa12.4□□□□□ -0.42
CSNK1E-212ENST00000494610 MYCBPAPQ8TBZ2 947 aa12.4□□□□□ -0.42
CSNK1E-212ENST00000494610 SLC35C1Q96A29 364 aa12.4□□□□□ -0.42
CSNK1E-212ENST00000494610 EEF2KMTQ96G04 330 aa12.4□□□□□ -0.42
CSNK1E-212ENST00000494610 P2RY11Q96G91 374 aa12.4□□□□□ -0.42
CSNK1E-212ENST00000494610 ERGIC2Q96RQ1 377 aa12.4□□□□□ -0.42
CSNK1E-212ENST00000494610 NUP58Q9BVL2 599 aa12.4□□□□□ -0.42
CSNK1E-212ENST00000494610 B3GNT5Q9BYG0 378 aa12.4□□□□□ -0.42
CSNK1E-212ENST00000494610 VPS16Q9H269 839 aa12.4□□□□□ -0.42
CSNK1E-212ENST00000494610 SLC6A14Q9UN76 642 aa12.4□□□□□ -0.42
CSNK1E-212ENST00000494610 CYP8B1Q9UNU6 501 aa12.4□□□□□ -0.42
CSNK1E-212ENST00000494610 RAD54BQ9Y620 910 aa12.4□□□□□ -0.42
CSNK1E-212ENST00000494610 A0A0A0MRY4 1105 aa12.39□□□□□ -0.43
CSNK1E-212ENST00000494610 IGHV1OR15-9A0A0B4J2B8 117 aa12.39□□□□□ -0.43
CSNK1E-212ENST00000494610 A0A1W2PQF6 199 aa12.39□□□□□ -0.43
CSNK1E-212ENST00000494610 WASH3PC4AMC7 463 aa12.39□□□□□ -0.43
CSNK1E-212ENST00000494610 PMM2O15305 246 aa12.39□□□□□ -0.43
CSNK1E-212ENST00000494610 PTMAP06454 111 aaKnown RBP12.39□□□□□ -0.43
CSNK1E-212ENST00000494610 GNL1P36915 607 aaPredicted RBP12.39□□□□□ -0.43
CSNK1E-212ENST00000494610 MXI1P50539 228 aa12.39□□□□□ -0.43
CSNK1E-212ENST00000494610 ATXN3P54252 364 aaPredicted RBP12.39□□□□□ -0.43
CSNK1E-212ENST00000494610 NOP14P78316 857 aaKnown RBP12.39□□□□□ -0.43
CSNK1E-212ENST00000494610 ZNF33AQ06730 810 aa12.39□□□□□ -0.43
CSNK1E-212ENST00000494610 SCAPQ12770 1279 aa12.39□□□□□ -0.43
CSNK1E-212ENST00000494610 KCNH2Q12809 1159 aa12.39□□□□□ -0.43
CSNK1E-212ENST00000494610 NR1I3Q14994 352 aa12.39□□□□□ -0.43
CSNK1E-212ENST00000494610 ANO4Q32M45 955 aa12.39□□□□□ -0.43
CSNK1E-212ENST00000494610 MIIPQ5JXC2 388 aa12.39□□□□□ -0.43
CSNK1E-212ENST00000494610 C10orf76Q5T2E6 689 aa12.39□□□□□ -0.43
CSNK1E-212ENST00000494610 PEAR1Q5VY43 1037 aaPredicted RBP12.39□□□□□ -0.43
CSNK1E-212ENST00000494610 TOGARAM2Q6ZUX3 1019 aa12.39□□□□□ -0.43
CSNK1E-212ENST00000494610 FMNL3Q8IVF7 1028 aa12.39□□□□□ -0.43
CSNK1E-212ENST00000494610 VSTM4Q8IW00 320 aa12.39□□□□□ -0.43
CSNK1E-212ENST00000494610 ETFBKMTQ8IXQ9 262 aa12.39□□□□□ -0.43
CSNK1E-212ENST00000494610 ZNF513Q8N8E2 541 aaPredicted RBP12.39□□□□□ -0.43
CSNK1E-212ENST00000494610 OR6B3Q8NGW1 331 aa12.39□□□□□ -0.43
CSNK1E-212ENST00000494610 ANKRD36BP1Q96IX9 119 aa12.39□□□□□ -0.43
CSNK1E-212ENST00000494610 PDLIM2Q96JY6 352 aa12.39□□□□□ -0.43
CSNK1E-212ENST00000494610 CGRRF1Q99675 332 aa12.39□□□□□ -0.43
CSNK1E-212ENST00000494610 CD248Q9HCU0 757 aa12.39□□□□□ -0.43
CSNK1E-212ENST00000494610 PRRT4C9JH25 899 aa12.38□□□□□ -0.43
CSNK1E-212ENST00000494610 OPHN1O60890 802 aa12.38□□□□□ -0.43
CSNK1E-212ENST00000494610 TBX18O95935 607 aa12.38□□□□□ -0.43
CSNK1E-212ENST00000494610 ADH1CP00326 375 aa12.38□□□□□ -0.43
CSNK1E-212ENST00000494610 SERPINF2P08697 491 aa12.38□□□□□ -0.43
CSNK1E-212ENST00000494610 HOXB2P14652 356 aa12.38□□□□□ -0.43
CSNK1E-212ENST00000494610 PTPN1P18031 435 aaKnown RBP12.38□□□□□ -0.43
CSNK1E-212ENST00000494610 NDUFV2P19404 249 aa12.38□□□□□ -0.43
CSNK1E-212ENST00000494610 TNFRSF4P43489 277 aa12.38□□□□□ -0.43
CSNK1E-212ENST00000494610 CDH8P55286 799 aa12.38□□□□□ -0.43
CSNK1E-212ENST00000494610 GFPT1Q06210 699 aaPredicted RBP12.38□□□□□ -0.43
CSNK1E-212ENST00000494610 MYO1EQ12965 1108 aa12.38□□□□□ -0.43
CSNK1E-212ENST00000494610 ORC1Q13415 861 aa12.38□□□□□ -0.43
CSNK1E-212ENST00000494610 DUOXA1Q1HG43 343 aa12.38□□□□□ -0.43
CSNK1E-212ENST00000494610 COL28A1Q2UY09 1125 aa12.38□□□□□ -0.43
CSNK1E-212ENST00000494610 SOWAHCQ53LP3 525 aaPredicted RBP12.38□□□□□ -0.43
CSNK1E-212ENST00000494610 TDRD10Q5VZ19 366 aaKnown RBP12.38□□□□□ -0.43
CSNK1E-212ENST00000494610 GBP6Q6ZN66 633 aa12.38□□□□□ -0.43
CSNK1E-212ENST00000494610 TRAPPC11Q7Z392 1133 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms