RNA–Protein interactions for RNA: ENST00000494582.1

LINC00488-201, long intergenic non-protein coding RNA 488, humanhuman

TSL 1 (best) BASIC

Gene LINC00488, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00488-201ENST00000494582 PIWIL2Q8TC59 973 aaKnown RBP10.47□□□□□ -0.73
LINC00488-201ENST00000494582 ACTL9Q8TC94 416 aa10.47□□□□□ -0.73
LINC00488-201ENST00000494582 GCOM2Q9BZD3 368 aaPredicted RBP10.47□□□□□ -0.73
LINC00488-201ENST00000494582 THAP1Q9NVV9 213 aa10.47□□□□□ -0.73
LINC00488-201ENST00000494582 ITGB1BP2Q9UKP3 347 aa10.47□□□□□ -0.73
LINC00488-201ENST00000494582 APOBEC2Q9Y235 224 aaKnown RBP10.47□□□□□ -0.73
LINC00488-201ENST00000494582 NOX1Q9Y5S8 564 aa10.47□□□□□ -0.73
LINC00488-201ENST00000494582 TEX264Q9Y6I9 313 aa10.47□□□□□ -0.73
LINC00488-201ENST00000494582 IGLV3-22A0A075B6J6 115 aa10.47□□□□□ -0.73
LINC00488-201ENST00000494582 PRSS51A0A1B0GVH4 220 aa10.47□□□□□ -0.73
LINC00488-201ENST00000494582 A0A1W2PPW3 197 aa10.47□□□□□ -0.73
LINC00488-201ENST00000494582 SULT1C4O75897 302 aa10.47□□□□□ -0.73
LINC00488-201ENST00000494582 FGF3P11487 239 aaPredicted RBP10.47□□□□□ -0.73
LINC00488-201ENST00000494582 GMPRP36959 345 aa10.47□□□□□ -0.73
LINC00488-201ENST00000494582 GPC3P51654 580 aa10.47□□□□□ -0.73
LINC00488-201ENST00000494582 CLCN2P51788 898 aa10.47□□□□□ -0.73
LINC00488-201ENST00000494582 PKNOX1P55347 436 aa10.47□□□□□ -0.73
LINC00488-201ENST00000494582 C21orf59P57076 290 aa10.47□□□□□ -0.73
LINC00488-201ENST00000494582 RPS3AP61247 264 aaKnown RBP10.47□□□□□ -0.73
LINC00488-201ENST00000494582 RPS8P62241 208 aaKnown RBP10.47□□□□□ -0.73
LINC00488-201ENST00000494582 ABCB5Q2M3G0 1257 aa10.47□□□□□ -0.73
LINC00488-201ENST00000494582 ZNF829Q3KNS6 432 aaPredicted RBP10.47□□□□□ -0.73
LINC00488-201ENST00000494582 MGAT5BQ3V5L5 792 aa10.47□□□□□ -0.73
LINC00488-201ENST00000494582 PPM1LQ5SGD2 360 aa10.47□□□□□ -0.73
LINC00488-201ENST00000494582 ANGEL2Q5VTE6 544 aaKnown RBP10.47□□□□□ -0.73
LINC00488-201ENST00000494582 TPTE2Q6XPS3 522 aa10.47□□□□□ -0.73
LINC00488-201ENST00000494582 LYSMD3Q7Z3D4 306 aa10.47□□□□□ -0.73
LINC00488-201ENST00000494582 SLC26A11Q86WA9 606 aa10.47□□□□□ -0.73
LINC00488-201ENST00000494582 CARM1Q86X55 608 aa10.47□□□□□ -0.73
LINC00488-201ENST00000494582 PDIK1LQ8N165 341 aa10.47□□□□□ -0.73
LINC00488-201ENST00000494582 CHPT1Q8WUD6 406 aa10.47□□□□□ -0.73
LINC00488-201ENST00000494582 STARD8Q92502 1023 aa10.47□□□□□ -0.73
LINC00488-201ENST00000494582 BORCS5Q969J3 196 aa10.47□□□□□ -0.73
LINC00488-201ENST00000494582 NT5C1BQ96P26 610 aa10.47□□□□□ -0.73
LINC00488-201ENST00000494582 SORT1Q99523 831 aa10.47□□□□□ -0.73
LINC00488-201ENST00000494582 SH2D3AQ9BRG2 576 aa10.47□□□□□ -0.73
LINC00488-201ENST00000494582 HAUS8Q9BT25 410 aa10.47□□□□□ -0.73
LINC00488-201ENST00000494582 GBA3Q9H227 469 aa10.47□□□□□ -0.73
LINC00488-201ENST00000494582 SACM1LQ9NTJ5 587 aa10.47□□□□□ -0.73
LINC00488-201ENST00000494582 NCKIPSDQ9NZQ3 722 aa10.47□□□□□ -0.73
LINC00488-201ENST00000494582 STK39Q9UEW8 545 aa10.47□□□□□ -0.73
LINC00488-201ENST00000494582 GIT1Q9Y2X7 761 aa10.47□□□□□ -0.73
LINC00488-201ENST00000494582 PLIN4Q96Q06 1357 aa10.46□□□□□ -0.73
LINC00488-201ENST00000494582 SMCHD1A6NHR9 2005 aa10.46□□□□□ -0.73
LINC00488-201ENST00000494582 STX16-NPEPL1H3BU86 382 aa10.46□□□□□ -0.73
LINC00488-201ENST00000494582 CSH1P0DML2 217 aa10.46□□□□□ -0.73
LINC00488-201ENST00000494582 CSH2P0DML3 217 aa10.46□□□□□ -0.73
LINC00488-201ENST00000494582 ZNF12P17014 697 aa10.46□□□□□ -0.73
LINC00488-201ENST00000494582 EIF2AK2P19525 551 aaKnown RBP10.46□□□□□ -0.73
LINC00488-201ENST00000494582 KCNA4P22459 653 aa10.46□□□□□ -0.73
LINC00488-201ENST00000494582 HOXD11P31277 338 aaPredicted RBP10.46□□□□□ -0.73
LINC00488-201ENST00000494582 SREBF1P36956 1147 aa10.46□□□□□ -0.73
LINC00488-201ENST00000494582 DPP6P42658 865 aa10.46□□□□□ -0.73
LINC00488-201ENST00000494582 BASP1P80723 227 aaKnown RBP10.46□□□□□ -0.73
LINC00488-201ENST00000494582 TXNL4AP83876 142 aaKnown RBP10.46□□□□□ -0.73
LINC00488-201ENST00000494582 FASTKD1Q53R41 847 aaKnown RBP10.46□□□□□ -0.73
LINC00488-201ENST00000494582 FGD3Q5JSP0 725 aa10.46□□□□□ -0.73
LINC00488-201ENST00000494582 DEPDC1Q5TB30 811 aa10.46□□□□□ -0.73
LINC00488-201ENST00000494582 EGFLAMQ63HQ2 1017 aa10.46□□□□□ -0.73
LINC00488-201ENST00000494582 PLEKHA7Q6IQ23 1121 aa10.46□□□□□ -0.73
LINC00488-201ENST00000494582 SMIM5Q71RC9 77 aa10.46□□□□□ -0.73
LINC00488-201ENST00000494582 PTAR1Q7Z6K3 402 aaPredicted RBP10.46□□□□□ -0.73
LINC00488-201ENST00000494582 NDUFAF2Q8N183 169 aa10.46□□□□□ -0.73
LINC00488-201ENST00000494582 FIBCD1Q8N539 461 aa10.46□□□□□ -0.73
LINC00488-201ENST00000494582 BHLHE22Q8NFJ8 381 aaPredicted RBP10.46□□□□□ -0.73
LINC00488-201ENST00000494582 NAA50Q9GZZ1 169 aaKnown RBP10.46□□□□□ -0.73
LINC00488-201ENST00000494582 SEMA6AQ9H2E6 1030 aa10.46□□□□□ -0.73
LINC00488-201ENST00000494582 ZFYVE28Q9HCC9 887 aa10.46□□□□□ -0.73
LINC00488-201ENST00000494582 CDH7Q9ULB5 785 aa10.46□□□□□ -0.73
LINC00488-201ENST00000494582 EMCNQ9ULC0 261 aa10.46□□□□□ -0.73
LINC00488-201ENST00000494582 RBBP6Q7Z6E9 1792 aaKnown RBP10.46□□□□□ -0.73
LINC00488-201ENST00000494582 C3orf70A6NLC5 250 aaPredicted RBP10.46□□□□□ -0.74
LINC00488-201ENST00000494582 FAM189A1O60320 539 aa10.46□□□□□ -0.74
LINC00488-201ENST00000494582 ATP5BP06576 529 aaKnown RBP10.46□□□□□ -0.74
LINC00488-201ENST00000494582 SNRPAP09012 282 aaKnown RBP10.46□□□□□ -0.74
LINC00488-201ENST00000494582 FGFR3P22607 806 aa10.46□□□□□ -0.74
LINC00488-201ENST00000494582 CA8P35219 290 aa10.46□□□□□ -0.74
LINC00488-201ENST00000494582 BMXP51813 675 aa10.46□□□□□ -0.74
LINC00488-201ENST00000494582 BNIP3Q12983 259 aa10.46□□□□□ -0.74
LINC00488-201ENST00000494582 CEACAM7Q14002 265 aa10.46□□□□□ -0.74
LINC00488-201ENST00000494582 FLOT2Q14254 428 aa10.46□□□□□ -0.74
LINC00488-201ENST00000494582 MYBPC2Q14324 1141 aa10.46□□□□□ -0.74
LINC00488-201ENST00000494582 KRT39Q6A163 491 aa10.46□□□□□ -0.74
LINC00488-201ENST00000494582 NIPAL1Q6NVV3 410 aa10.46□□□□□ -0.74
LINC00488-201ENST00000494582 PPP1R2P3Q6NXS1 205 aa10.46□□□□□ -0.74
LINC00488-201ENST00000494582 STXBP4Q6ZWJ1 553 aa10.46□□□□□ -0.74
LINC00488-201ENST00000494582 FAM71DQ8N9W8 422 aa10.46□□□□□ -0.74
LINC00488-201ENST00000494582 USP13Q92995 863 aaPredicted RBP10.46□□□□□ -0.74
LINC00488-201ENST00000494582 ITPKCQ96DU7 683 aa10.46□□□□□ -0.74
LINC00488-201ENST00000494582 CLIP3Q96DZ5 547 aa10.46□□□□□ -0.74
LINC00488-201ENST00000494582 KCNK16Q96T55 309 aa10.46□□□□□ -0.74
LINC00488-201ENST00000494582 COQ10BQ9H8M1 238 aa10.46□□□□□ -0.74
LINC00488-201ENST00000494582 VPS51Q9UID3 782 aa10.46□□□□□ -0.74
LINC00488-201ENST00000494582 COQ4Q9Y3A0 265 aa10.46□□□□□ -0.74
LINC00488-201ENST00000494582 CNTNAP2Q9UHC6 1331 aa10.46□□□□□ -0.74
LINC00488-201ENST00000494582 C6orf229H3BNL8 230 aa10.45□□□□□ -0.74
LINC00488-201ENST00000494582 AIM2O14862 343 aa10.45□□□□□ -0.74
LINC00488-201ENST00000494582 PMM2O15305 246 aa10.45□□□□□ -0.74
LINC00488-201ENST00000494582 AQP9O43315 295 aa10.45□□□□□ -0.74
LINC00488-201ENST00000494582 ZC3H11AO75152 810 aaKnown RBP eCLIP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms