RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 CABIN1Q9Y6J0 2220 aa13.31□□□□□ -0.28
SKA1-205ENST00000494518 DMXL2Q8TDJ6 3036 aa13.3□□□□□ -0.28
SKA1-205ENST00000494518 ZBTB24O43167 697 aaPredicted RBP13.3□□□□□ -0.28
SKA1-205ENST00000494518 STC2O76061 302 aa13.3□□□□□ -0.28
SKA1-205ENST00000494518 CISD3P0C7P0 127 aa13.3□□□□□ -0.28
SKA1-205ENST00000494518 MAOBP27338 520 aa13.3□□□□□ -0.28
SKA1-205ENST00000494518 FAM193AP78312 1265 aa13.3□□□□□ -0.28
SKA1-205ENST00000494518 SIM1P81133 766 aaPredicted RBP13.3□□□□□ -0.28
SKA1-205ENST00000494518 GFPT1Q06210 699 aaPredicted RBP13.3□□□□□ -0.28
SKA1-205ENST00000494518 PPP1R26Q5T8A7 1209 aaPredicted RBP13.3□□□□□ -0.28
SKA1-205ENST00000494518 SLC36A4Q6YBV0 504 aa13.3□□□□□ -0.28
SKA1-205ENST00000494518 Q6ZNB5 142 aa13.3□□□□□ -0.28
SKA1-205ENST00000494518 CACUL1Q86Y37 369 aa13.3□□□□□ -0.28
SKA1-205ENST00000494518 FAM186BQ8IYM0 893 aa13.3□□□□□ -0.28
SKA1-205ENST00000494518 RGL4Q8IZJ4 473 aa13.3□□□□□ -0.28
SKA1-205ENST00000494518 HDDC3Q8N4P3 179 aa13.3□□□□□ -0.28
SKA1-205ENST00000494518 MINDY1Q8N5J2 469 aa13.3□□□□□ -0.28
SKA1-205ENST00000494518 TRIML1Q8N9V2 468 aa13.3□□□□□ -0.28
SKA1-205ENST00000494518 KCNV2Q8TDN2 545 aa13.3□□□□□ -0.28
SKA1-205ENST00000494518 EEF2KMTQ96G04 330 aa13.3□□□□□ -0.28
SKA1-205ENST00000494518 DUSP9Q99956 384 aaKnown RBP13.3□□□□□ -0.28
SKA1-205ENST00000494518 TMEM121BQ9BXQ6 578 aaPredicted RBP13.3□□□□□ -0.28
SKA1-205ENST00000494518 NIF3L1Q9GZT8 377 aa13.3□□□□□ -0.28
SKA1-205ENST00000494518 SLC32A1Q9H598 525 aa13.3□□□□□ -0.28
SKA1-205ENST00000494518 CD248Q9HCU0 757 aa13.3□□□□□ -0.28
SKA1-205ENST00000494518 WDR35Q9P2L0 1181 aa13.3□□□□□ -0.28
SKA1-205ENST00000494518 PCDHA5Q9Y5H7 936 aa13.3□□□□□ -0.28
SKA1-205ENST00000494518 IKBKBO14920 756 aa13.29□□□□□ -0.28
SKA1-205ENST00000494518 NDUFS2O75306 463 aa13.29□□□□□ -0.28
SKA1-205ENST00000494518 CILPO75339 1184 aa13.29□□□□□ -0.28
SKA1-205ENST00000494518 KLKB1P03952 638 aa13.29□□□□□ -0.28
SKA1-205ENST00000494518 KRT13P13646 458 aa13.29□□□□□ -0.28
SKA1-205ENST00000494518 TRIM21P19474 475 aaKnown RBP13.29□□□□□ -0.28
SKA1-205ENST00000494518 PLA2G4AP47712 749 aa13.29□□□□□ -0.28
SKA1-205ENST00000494518 KIF11P52732 1056 aa13.29□□□□□ -0.28
SKA1-205ENST00000494518 EFEMP1Q12805 493 aa13.29□□□□□ -0.28
SKA1-205ENST00000494518 SPDYCQ5MJ68 293 aa13.29□□□□□ -0.28
SKA1-205ENST00000494518 PEAR1Q5VY43 1037 aaPredicted RBP13.29□□□□□ -0.28
SKA1-205ENST00000494518 ATL3Q6DD88 541 aa13.29□□□□□ -0.28
SKA1-205ENST00000494518 MRGPRX1Q96LB2 322 aa13.29□□□□□ -0.28
SKA1-205ENST00000494518 GABRG3Q99928 467 aa13.29□□□□□ -0.28
SKA1-205ENST00000494518 CAPN10Q9HC96 672 aa13.29□□□□□ -0.28
SKA1-205ENST00000494518 KLK13Q9UKR3 277 aa13.29□□□□□ -0.28
SKA1-205ENST00000494518 STON1Q9Y6Q2 735 aa13.29□□□□□ -0.28
SKA1-205ENST00000494518 GOLGA4Q13439 2230 aaKnown RBP13.29□□□□□ -0.28
SKA1-205ENST00000494518 TMEM131Q92545 1883 aa13.29□□□□□ -0.28
SKA1-205ENST00000494518 TP53BP1Q12888 1972 aaPredicted RBP13.29□□□□□ -0.28
SKA1-205ENST00000494518 OPHN1O60890 802 aa13.28□□□□□ -0.28
SKA1-205ENST00000494518 ZNF217O75362 1048 aa13.28□□□□□ -0.28
SKA1-205ENST00000494518 SERPINF2P08697 491 aa13.28□□□□□ -0.28
SKA1-205ENST00000494518 CMA1P23946 247 aa13.28□□□□□ -0.28
SKA1-205ENST00000494518 CORO1AP31146 461 aaKnown RBP13.28□□□□□ -0.28
SKA1-205ENST00000494518 DPP6P42658 865 aa13.28□□□□□ -0.28
SKA1-205ENST00000494518 SYKP43405 635 aa13.28□□□□□ -0.28
SKA1-205ENST00000494518 NDUFA8P51970 172 aa13.28□□□□□ -0.28
SKA1-205ENST00000494518 SEMA3BQ13214 749 aa13.28□□□□□ -0.28
SKA1-205ENST00000494518 GEN1Q17RS7 908 aa13.28□□□□□ -0.28
SKA1-205ENST00000494518 INTS8Q75QN2 995 aaKnown RBP13.28□□□□□ -0.28
SKA1-205ENST00000494518 PIP4P1Q86T03 277 aa13.28□□□□□ -0.28
SKA1-205ENST00000494518 CEP76Q8TAP6 659 aa13.28□□□□□ -0.28
SKA1-205ENST00000494518 TMEM174Q8WUU8 243 aa13.28□□□□□ -0.28
SKA1-205ENST00000494518 NDRG1Q92597 394 aaKnown RBP13.28□□□□□ -0.28
SKA1-205ENST00000494518 SEMA4DQ92854 862 aa13.28□□□□□ -0.28
SKA1-205ENST00000494518 GATA6Q92908 595 aa13.28□□□□□ -0.28
SKA1-205ENST00000494518 SPATA32Q96LK8 384 aa13.28□□□□□ -0.28
SKA1-205ENST00000494518 HEXIM2Q96MH2 286 aaKnown RBP13.28□□□□□ -0.28
SKA1-205ENST00000494518 CAMK1GQ96NX5 476 aa13.28□□□□□ -0.28
SKA1-205ENST00000494518 ARID3AQ99856 593 aa13.28□□□□□ -0.28
SKA1-205ENST00000494518 DUSP16Q9BY84 665 aa13.28□□□□□ -0.28
SKA1-205ENST00000494518 CYP3A43Q9HB55 503 aa13.28□□□□□ -0.28
SKA1-205ENST00000494518 TRAF3IP3Q9Y228 551 aa13.28□□□□□ -0.28
SKA1-205ENST00000494518 HPSEQ9Y251 543 aa13.28□□□□□ -0.28
SKA1-205ENST00000494518 LAMA5O15230 3695 aa13.28□□□□□ -0.28
SKA1-205ENST00000494518 BAHCC1Q9P281 2608 aa13.27□□□□□ -0.28
SKA1-205ENST00000494518 ACACAQ13085 2346 aa13.27□□□□□ -0.28
SKA1-205ENST00000494518 ARHGAP33O14559 1287 aa13.27□□□□□ -0.29
SKA1-205ENST00000494518 RALAP11233 206 aa13.27□□□□□ -0.29
SKA1-205ENST00000494518 HOXD12P35452 270 aa13.27□□□□□ -0.29
SKA1-205ENST00000494518 IL12RB1P42701 662 aa13.27□□□□□ -0.29
SKA1-205ENST00000494518 MFAP3P55082 362 aa13.27□□□□□ -0.29
SKA1-205ENST00000494518 PLEKHG6Q3KR16 790 aa13.27□□□□□ -0.29
SKA1-205ENST00000494518 FUT11Q495W5 492 aa13.27□□□□□ -0.29
SKA1-205ENST00000494518 FYB2Q5VWT5 728 aa13.27□□□□□ -0.29
SKA1-205ENST00000494518 KLHDC10Q6PID8 442 aa13.27□□□□□ -0.29
SKA1-205ENST00000494518 CCDC186Q7Z3E2 898 aa13.27□□□□□ -0.29
SKA1-205ENST00000494518 DENND1CQ8IV53 801 aa13.27□□□□□ -0.29
SKA1-205ENST00000494518 SMYD4Q8IYR2 804 aaPredicted RBP13.27□□□□□ -0.29
SKA1-205ENST00000494518 CCDC150Q8NCX0 1101 aa13.27□□□□□ -0.29
SKA1-205ENST00000494518 SORCS1Q8WY21 1168 aa13.27□□□□□ -0.29
SKA1-205ENST00000494518 CCDC47Q96A33 483 aaKnown RBP13.27□□□□□ -0.29
SKA1-205ENST00000494518 PNPLA8Q9NP80 782 aa13.27□□□□□ -0.29
SKA1-205ENST00000494518 USP25Q9UHP3 1055 aa13.27□□□□□ -0.29
SKA1-205ENST00000494518 CLEC4EQ9ULY5 219 aa13.27□□□□□ -0.29
SKA1-205ENST00000494518 PLXNB3Q9ULL4 1909 aa13.27□□□□□ -0.29
SKA1-205ENST00000494518 FREM2Q5SZK8 3169 aa13.26□□□□□ -0.29
SKA1-205ENST00000494518 SLC12A8A0AV02 714 aa13.26□□□□□ -0.29
SKA1-205ENST00000494518 MEI4A8MW99 385 aa13.26□□□□□ -0.29
SKA1-205ENST00000494518 MAPK13O15264 365 aa13.26□□□□□ -0.29
SKA1-205ENST00000494518 RHOBTB3O94955 611 aa13.26□□□□□ -0.29
SKA1-205ENST00000494518 CD59P13987 128 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms