RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 SLC6A11P48066 632 aa13.82□□□□□ -0.2
ERCC3-209ENST00000494464 MRPS21P82921 87 aaKnown RBP13.82□□□□□ -0.2
ERCC3-209ENST00000494464 MESP2Q0VG99 397 aa13.82□□□□□ -0.2
ERCC3-209ENST00000494464 DMC1Q14565 340 aa13.82□□□□□ -0.2
ERCC3-209ENST00000494464 MEA1Q16626 185 aa13.82□□□□□ -0.2
ERCC3-209ENST00000494464 FILIP1LQ4L180 1135 aa13.82□□□□□ -0.2
ERCC3-209ENST00000494464 HEATR6Q6AI08 1181 aaKnown RBP13.82□□□□□ -0.2
ERCC3-209ENST00000494464 LAIR1Q6GTX8 287 aa13.82□□□□□ -0.2
ERCC3-209ENST00000494464 MIB1Q86YT6 1006 aa13.82□□□□□ -0.2
ERCC3-209ENST00000494464 SIX6OS1Q8N1H7 587 aa13.82□□□□□ -0.2
ERCC3-209ENST00000494464 UBA3Q8TBC4 463 aa13.82□□□□□ -0.2
ERCC3-209ENST00000494464 HINFPQ9BQA5 517 aa13.82□□□□□ -0.2
ERCC3-209ENST00000494464 OLA1Q9NTK5 396 aaKnown RBP13.82□□□□□ -0.2
ERCC3-209ENST00000494464 RASAL2Q9UJF2 1139 aa13.82□□□□□ -0.2
ERCC3-209ENST00000494464 RAB23Q9ULC3 237 aa13.82□□□□□ -0.2
ERCC3-209ENST00000494464 PYCARDQ9ULZ3 195 aa13.82□□□□□ -0.2
ERCC3-209ENST00000494464 MMP17Q9ULZ9 603 aa13.82□□□□□ -0.2
ERCC3-209ENST00000494464 ZNF510Q9Y2H8 683 aa13.82□□□□□ -0.2
ERCC3-209ENST00000494464 ITIH6Q6UXX5 1313 aa13.81□□□□□ -0.2
ERCC3-209ENST00000494464 M0QYV0 167 aa13.81□□□□□ -0.2
ERCC3-209ENST00000494464 HRO43593 1189 aa13.81□□□□□ -0.2
ERCC3-209ENST00000494464 NRDCO43847 1150 aa13.81□□□□□ -0.2
ERCC3-209ENST00000494464 TULP3O75386 442 aa13.81□□□□□ -0.2
ERCC3-209ENST00000494464 APBB3O95704 486 aa13.81□□□□□ -0.2
ERCC3-209ENST00000494464 HOXC13P31276 330 aa13.81□□□□□ -0.2
ERCC3-209ENST00000494464 PBX1P40424 430 aa13.81□□□□□ -0.2
ERCC3-209ENST00000494464 TNFRSF4P43489 277 aa13.81□□□□□ -0.2
ERCC3-209ENST00000494464 DAOAP59103 153 aa13.81□□□□□ -0.2
ERCC3-209ENST00000494464 CCZ1BP86790 482 aa13.81□□□□□ -0.2
ERCC3-209ENST00000494464 CCZ1P86791 482 aaPredicted RBP13.81□□□□□ -0.2
ERCC3-209ENST00000494464 KDSRQ06136 332 aa13.81□□□□□ -0.2
ERCC3-209ENST00000494464 EFEMP1Q12805 493 aa13.81□□□□□ -0.2
ERCC3-209ENST00000494464 TBX2Q13207 712 aaPredicted RBP13.81□□□□□ -0.2
ERCC3-209ENST00000494464 SIM2Q14190 667 aaPredicted RBP13.81□□□□□ -0.2
ERCC3-209ENST00000494464 MAN2A1Q16706 1144 aa13.81□□□□□ -0.2
ERCC3-209ENST00000494464 ANO4Q32M45 955 aa13.81□□□□□ -0.2
ERCC3-209ENST00000494464 TCP11X2Q5H9J9 407 aa13.81□□□□□ -0.2
ERCC3-209ENST00000494464 SPECC1LQ69YQ0 1117 aa13.81□□□□□ -0.2
ERCC3-209ENST00000494464 GBP6Q6ZN66 633 aa13.81□□□□□ -0.2
ERCC3-209ENST00000494464 RSRC2Q7L4I2 434 aaKnown RBP13.81□□□□□ -0.2
ERCC3-209ENST00000494464 TMEM25Q86YD3 366 aa13.81□□□□□ -0.2
ERCC3-209ENST00000494464 FAM114A1Q8IWE2 563 aa13.81□□□□□ -0.2
ERCC3-209ENST00000494464 TERB1Q8NA31 727 aa13.81□□□□□ -0.2
ERCC3-209ENST00000494464 IRGQQ8WZA9 623 aa13.81□□□□□ -0.2
ERCC3-209ENST00000494464 HHIPQ96QV1 700 aa13.81□□□□□ -0.2
ERCC3-209ENST00000494464 DCLK3Q9C098 648 aa13.81□□□□□ -0.2
ERCC3-209ENST00000494464 RTN4Q9NQC3 1192 aaKnown RBP13.81□□□□□ -0.2
ERCC3-209ENST00000494464 MARCH2Q9P0N8 246 aa13.81□□□□□ -0.2
ERCC3-209ENST00000494464 WDR35Q9P2L0 1181 aa13.81□□□□□ -0.2
ERCC3-209ENST00000494464 DEC1Q9P2X7 70 aa13.81□□□□□ -0.2
ERCC3-209ENST00000494464 APEX2Q9UBZ4 518 aa13.81□□□□□ -0.2
ERCC3-209ENST00000494464 EBF1Q9UH73 591 aa13.81□□□□□ -0.2
ERCC3-209ENST00000494464 GMEB2Q9UKD1 530 aa13.81□□□□□ -0.2
ERCC3-209ENST00000494464 STRIP2Q9ULQ0 834 aa13.81□□□□□ -0.2
ERCC3-209ENST00000494464 GPR179Q6PRD1 2367 aa13.8□□□□□ -0.2
ERCC3-209ENST00000494464 KCNJ18B7U540 433 aa13.8□□□□□ -0.2
ERCC3-209ENST00000494464 KRT5P13647 590 aa13.8□□□□□ -0.2
ERCC3-209ENST00000494464 KIR2DL1P43626 348 aaPredicted RBP13.8□□□□□ -0.2
ERCC3-209ENST00000494464 MTIF2P46199 727 aaKnown RBP13.8□□□□□ -0.2
ERCC3-209ENST00000494464 KCNJ12Q14500 433 aa13.8□□□□□ -0.2
ERCC3-209ENST00000494464 KRT31Q15323 416 aa13.8□□□□□ -0.2
ERCC3-209ENST00000494464 EXOC3L4Q17RC7 722 aa13.8□□□□□ -0.2
ERCC3-209ENST00000494464 HSP90AA4PQ58FG1 418 aa13.8□□□□□ -0.2
ERCC3-209ENST00000494464 PMF1Q6P1K2 205 aa13.8□□□□□ -0.2
ERCC3-209ENST00000494464 PRR23BQ6ZRT6 265 aa13.8□□□□□ -0.2
ERCC3-209ENST00000494464 SFTPA1Q8IWL2 248 aa13.8□□□□□ -0.2
ERCC3-209ENST00000494464 GPR161Q8N6U8 529 aaKnown RBP13.8□□□□□ -0.2
ERCC3-209ENST00000494464 CCDC112Q8NEF3 446 aa13.8□□□□□ -0.2
ERCC3-209ENST00000494464 KCNV2Q8TDN2 545 aa13.8□□□□□ -0.2
ERCC3-209ENST00000494464 GAB3Q8WWW8 586 aa13.8□□□□□ -0.2
ERCC3-209ENST00000494464 PLD4Q96BZ4 506 aa13.8□□□□□ -0.2
ERCC3-209ENST00000494464 HSFY1Q96LI6 401 aa13.8□□□□□ -0.2
ERCC3-209ENST00000494464 XPO6Q96QU8 1125 aaKnown RBP13.8□□□□□ -0.2
ERCC3-209ENST00000494464 BBS2Q9BXC9 721 aa13.8□□□□□ -0.2
ERCC3-209ENST00000494464 UBE2TQ9NPD8 197 aaPredicted RBP13.8□□□□□ -0.2
ERCC3-209ENST00000494464 KCND1Q9NSA2 647 aa13.8□□□□□ -0.2
ERCC3-209ENST00000494464 ABCC13Q9NSE7 274 aa13.8□□□□□ -0.2
ERCC3-209ENST00000494464 PTPRZ1P23471 2315 aaPredicted RBP13.8□□□□□ -0.2
ERCC3-209ENST00000494464 YJEFN3A6XGL0 299 aa13.79□□□□□ -0.2
ERCC3-209ENST00000494464 E7ENQ6 273 aa13.79□□□□□ -0.2
ERCC3-209ENST00000494464 NEDD8-MDP1E9PL57 170 aa13.79□□□□□ -0.2
ERCC3-209ENST00000494464 AXIN1O15169 862 aa13.79□□□□□ -0.2
ERCC3-209ENST00000494464 RPP40O75818 363 aaKnown RBP13.79□□□□□ -0.2
ERCC3-209ENST00000494464 FBXO21O94952 628 aa13.79□□□□□ -0.2
ERCC3-209ENST00000494464 KLKB1P03952 638 aa13.79□□□□□ -0.2
ERCC3-209ENST00000494464 PRKCSHP14314 528 aaPredicted RBP13.79□□□□□ -0.2
ERCC3-209ENST00000494464 TYRP14679 529 aa13.79□□□□□ -0.2
ERCC3-209ENST00000494464 CORO1AP31146 461 aaKnown RBP13.79□□□□□ -0.2
ERCC3-209ENST00000494464 CHKAP35790 457 aa13.79□□□□□ -0.2
ERCC3-209ENST00000494464 PXNP49023 591 aaPredicted RBP13.79□□□□□ -0.2
ERCC3-209ENST00000494464 RPL34P49207 117 aaKnown RBP13.79□□□□□ -0.2
ERCC3-209ENST00000494464 COPB1P53618 953 aaKnown RBP13.79□□□□□ -0.2
ERCC3-209ENST00000494464 MFAP3P55082 362 aa13.79□□□□□ -0.2
ERCC3-209ENST00000494464 SEC13P55735 322 aa13.79□□□□□ -0.2
ERCC3-209ENST00000494464 SRSF5Q13243 272 aaKnown RBP13.79□□□□□ -0.2
ERCC3-209ENST00000494464 C2orf27AQ580R0 203 aa13.79□□□□□ -0.2
ERCC3-209ENST00000494464 BSPRYQ5W0U4 402 aa13.79□□□□□ -0.2
ERCC3-209ENST00000494464 GRAMD4Q6IC98 578 aa13.79□□□□□ -0.2
ERCC3-209ENST00000494464 MSANTD2Q6P1R3 559 aa13.79□□□□□ -0.2
ERCC3-209ENST00000494464 NUDT18Q6ZVK8 323 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms