RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 CLIC5Q9NZA1 410 aa7.07□□□□□ -1.28
MSH5-217ENST00000494458 STK39Q9UEW8 545 aa7.07□□□□□ -1.28
MSH5-217ENST00000494458 FAM153AQ9UHL3 310 aa7.07□□□□□ -1.28
MSH5-217ENST00000494458 RASAL2Q9UJF2 1139 aa7.07□□□□□ -1.28
MSH5-217ENST00000494458 DNPEPQ9ULA0 475 aa7.07□□□□□ -1.28
MSH5-217ENST00000494458 STAP1Q9ULZ2 295 aa7.07□□□□□ -1.28
MSH5-217ENST00000494458 HPCAL4Q9UM19 191 aa7.07□□□□□ -1.28
MSH5-217ENST00000494458 NAALADL1Q9UQQ1 740 aa7.07□□□□□ -1.28
MSH5-217ENST00000494458 ATP11BQ9Y2G3 1177 aa7.07□□□□□ -1.28
MSH5-217ENST00000494458 PRG3Q9Y2Y8 225 aaPredicted RBP7.07□□□□□ -1.28
MSH5-217ENST00000494458 PCDHB5Q9Y5E4 795 aa7.07□□□□□ -1.28
MSH5-217ENST00000494458 NFS1Q9Y697 457 aa7.07□□□□□ -1.28
MSH5-217ENST00000494458 BCLAF3A2AJT9 711 aaKnown RBP7.06□□□□□ -1.28
MSH5-217ENST00000494458 MTMR11A4FU01 709 aa7.06□□□□□ -1.28
MSH5-217ENST00000494458 KCNU1A8MYU2 1149 aa7.06□□□□□ -1.28
MSH5-217ENST00000494458 C1RP00736 705 aa7.06□□□□□ -1.28
MSH5-217ENST00000494458 AMHP03971 560 aa7.06□□□□□ -1.28
MSH5-217ENST00000494458 SOD2P04179 222 aa7.06□□□□□ -1.28
MSH5-217ENST00000494458 OR4Q2P0C623 313 aa7.06□□□□□ -1.28
MSH5-217ENST00000494458 USP17L7P0C7H9 530 aa7.06□□□□□ -1.28
MSH5-217ENST00000494458 HSPA1AP0DMV8 641 aaKnown RBP7.06□□□□□ -1.28
MSH5-217ENST00000494458 HSPA1BP0DMV9 641 aaKnown RBP7.06□□□□□ -1.28
MSH5-217ENST00000494458 HAPLN1P10915 354 aaPredicted RBP7.06□□□□□ -1.28
MSH5-217ENST00000494458 CSF2RAP15509 400 aa7.06□□□□□ -1.28
MSH5-217ENST00000494458 ZFXP17010 805 aaPredicted RBP7.06□□□□□ -1.28
MSH5-217ENST00000494458 DESP17661 470 aa7.06□□□□□ -1.28
MSH5-217ENST00000494458 HOXC13P31276 330 aa7.06□□□□□ -1.28
MSH5-217ENST00000494458 HTR7P34969 479 aa7.06□□□□□ -1.28
MSH5-217ENST00000494458 MAGEA6P43360 314 aa7.06□□□□□ -1.28
MSH5-217ENST00000494458 ALDH7A1P49419 539 aaKnown RBP7.06□□□□□ -1.28
MSH5-217ENST00000494458 PGFP49763 221 aa7.06□□□□□ -1.28
MSH5-217ENST00000494458 SLC5A3P53794 718 aa7.06□□□□□ -1.28
MSH5-217ENST00000494458 ATXN1P54253 815 aaKnown RBP7.06□□□□□ -1.28
MSH5-217ENST00000494458 CDH6P55285 790 aa7.06□□□□□ -1.28
MSH5-217ENST00000494458 OTUD4Q01804 1114 aaKnown RBP7.06□□□□□ -1.28
MSH5-217ENST00000494458 CAV1Q03135 178 aa7.06□□□□□ -1.28
MSH5-217ENST00000494458 SMC1AQ14683 1233 aaKnown RBP7.06□□□□□ -1.28
MSH5-217ENST00000494458 PAFAH1B3Q15102 231 aaKnown RBP7.06□□□□□ -1.28
MSH5-217ENST00000494458 UAP1Q16222 522 aaPredicted RBP7.06□□□□□ -1.28
MSH5-217ENST00000494458 SMTNL2Q2TAL5 461 aa7.06□□□□□ -1.28
MSH5-217ENST00000494458 USP41Q3LFD5 358 aa7.06□□□□□ -1.28
MSH5-217ENST00000494458 CTXN3Q4LDR2 81 aa7.06□□□□□ -1.28
MSH5-217ENST00000494458 ZC3H12AQ5D1E8 599 aaKnown RBP7.06□□□□□ -1.28
MSH5-217ENST00000494458 RASIP1Q5U651 963 aa7.06□□□□□ -1.28
MSH5-217ENST00000494458 EMC10Q5UCC4 262 aa7.06□□□□□ -1.28
MSH5-217ENST00000494458 MANEALQ5VSG8 457 aa7.06□□□□□ -1.28
MSH5-217ENST00000494458 HIBCHQ6NVY1 386 aaPredicted RBP7.06□□□□□ -1.28
MSH5-217ENST00000494458 KCNT2Q6UVM3 1135 aa7.06□□□□□ -1.28
MSH5-217ENST00000494458 TMC3Q7Z5M5 1100 aa7.06□□□□□ -1.28
MSH5-217ENST00000494458 DDX53Q86TM3 631 aaKnown RBP7.06□□□□□ -1.28
MSH5-217ENST00000494458 DDX42Q86XP3 938 aaKnown RBP eCLIP7.06□□□□□ -1.28
MSH5-217ENST00000494458 CCDC50Q8IVM0 306 aa7.06□□□□□ -1.28
MSH5-217ENST00000494458 NUP93Q8N1F7 819 aa7.06□□□□□ -1.28
MSH5-217ENST00000494458 TMEM199Q8N511 208 aa7.06□□□□□ -1.28
MSH5-217ENST00000494458 CCDC185Q8N715 623 aa7.06□□□□□ -1.28
MSH5-217ENST00000494458 CCDC89Q8N998 374 aa7.06□□□□□ -1.28
MSH5-217ENST00000494458 TSEN2Q8NCE0 465 aaKnown RBP7.06□□□□□ -1.28
MSH5-217ENST00000494458 SCAMP5Q8TAC9 235 aa7.06□□□□□ -1.28
MSH5-217ENST00000494458 FBXO25Q8TCJ0 367 aa7.06□□□□□ -1.28
MSH5-217ENST00000494458 SLC39A13Q96H72 371 aa7.06□□□□□ -1.28
MSH5-217ENST00000494458 MYRFLQ96LU7 910 aa7.06□□□□□ -1.28
MSH5-217ENST00000494458 OLFM3Q96PB7 478 aa7.06□□□□□ -1.28
MSH5-217ENST00000494458 CSPG4P5Q96PW8 444 aa7.06□□□□□ -1.28
MSH5-217ENST00000494458 HAPLN3Q96S86 360 aa7.06□□□□□ -1.28
MSH5-217ENST00000494458 KCTD15Q96SI1 283 aaPredicted RBP7.06□□□□□ -1.28
MSH5-217ENST00000494458 CLSTN3Q9BQT9 956 aa7.06□□□□□ -1.28
MSH5-217ENST00000494458 HERC2P3Q9BVR0 1158 aa7.06□□□□□ -1.28
MSH5-217ENST00000494458 PHACTR1Q9C0D0 580 aa7.06□□□□□ -1.28
MSH5-217ENST00000494458 TSPYL1Q9H0U9 437 aa7.06□□□□□ -1.28
MSH5-217ENST00000494458 CRISPLD1Q9H336 500 aa7.06□□□□□ -1.28
MSH5-217ENST00000494458 SMOC2Q9H3U7 446 aa7.06□□□□□ -1.28
MSH5-217ENST00000494458 FBXO44Q9H4M3 255 aa7.06□□□□□ -1.28
MSH5-217ENST00000494458 RXFP1Q9HBX9 757 aa7.06□□□□□ -1.28
MSH5-217ENST00000494458 NGRNQ9NPE2 291 aaKnown RBP7.06□□□□□ -1.28
MSH5-217ENST00000494458 ANLNQ9NQW6 1124 aa7.06□□□□□ -1.28
MSH5-217ENST00000494458 AAASQ9NRG9 546 aa7.06□□□□□ -1.28
MSH5-217ENST00000494458 KLHL11Q9NVR0 708 aa7.06□□□□□ -1.28
MSH5-217ENST00000494458 CWC15Q9P013 229 aaKnown RBP7.06□□□□□ -1.28
MSH5-217ENST00000494458 FNIP2Q9P278 1114 aa7.06□□□□□ -1.28
MSH5-217ENST00000494458 NEU3Q9UQ49 428 aa7.06□□□□□ -1.28
MSH5-217ENST00000494458 RAD54BQ9Y620 910 aa7.06□□□□□ -1.28
MSH5-217ENST00000494458 WDR27A2RRH5 827 aa7.05□□□□□ -1.28
MSH5-217ENST00000494458 CFAP69A5D8W1 941 aa7.05□□□□□ -1.28
MSH5-217ENST00000494458 M0QYT0 321 aa7.05□□□□□ -1.28
MSH5-217ENST00000494458 SMAPO00193 183 aa7.05□□□□□ -1.28
MSH5-217ENST00000494458 DCLK1O15075 740 aa7.05□□□□□ -1.28
MSH5-217ENST00000494458 ADAM12O43184 909 aa7.05□□□□□ -1.28
MSH5-217ENST00000494458 IRAK2O43187 625 aa7.05□□□□□ -1.28
MSH5-217ENST00000494458 ZNF189O75820 626 aaPredicted RBP7.05□□□□□ -1.28
MSH5-217ENST00000494458 RTN3O95197 1032 aaPredicted RBP7.05□□□□□ -1.28
MSH5-217ENST00000494458 GJB5O95377 273 aa7.05□□□□□ -1.28
MSH5-217ENST00000494458 SYF2O95926 243 aaKnown RBP7.05□□□□□ -1.28
MSH5-217ENST00000494458 GAS8O95995 478 aa7.05□□□□□ -1.28
MSH5-217ENST00000494458 IGLV3-27P01718 113 aa7.05□□□□□ -1.28
MSH5-217ENST00000494458 NCAM1P13591 858 aa7.05□□□□□ -1.28
MSH5-217ENST00000494458 RARGP13631 454 aa7.05□□□□□ -1.28
MSH5-217ENST00000494458 PECAM1P16284 738 aaPredicted RBP7.05□□□□□ -1.28
MSH5-217ENST00000494458 LAG3P18627 525 aa7.05□□□□□ -1.28
MSH5-217ENST00000494458 SSR1P43307 286 aaKnown RBP7.05□□□□□ -1.28
MSH5-217ENST00000494458 SULT1E1P49888 294 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms