RNA–Protein interactions for RNA: ENST00000493991.5

COL2A1-208, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 3,756 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-208ENST00000493991 SCN9AQ15858 1988 aa11.4□□□□□ -0.58
COL2A1-208ENST00000493991 SMIM28A0A1B0GU29 152 aa11.4□□□□□ -0.59
COL2A1-208ENST00000493991 BUD23O43709 281 aaKnown RBP11.4□□□□□ -0.59
COL2A1-208ENST00000493991 SNX3O60493 162 aa11.4□□□□□ -0.59
COL2A1-208ENST00000493991 HSPA4LO95757 839 aa11.4□□□□□ -0.59
COL2A1-208ENST00000493991 MMP3P08254 477 aa11.4□□□□□ -0.59
COL2A1-208ENST00000493991 IRF1P10914 325 aa11.4□□□□□ -0.59
COL2A1-208ENST00000493991 ICAM3P32942 547 aa11.4□□□□□ -0.59
COL2A1-208ENST00000493991 RGS2P41220 211 aa11.4□□□□□ -0.59
COL2A1-208ENST00000493991 YWHAZP63104 245 aaKnown RBP11.4□□□□□ -0.59
COL2A1-208ENST00000493991 KLC1Q07866 573 aa11.4□□□□□ -0.59
COL2A1-208ENST00000493991 ARHGAP1Q07960 439 aa11.4□□□□□ -0.59
COL2A1-208ENST00000493991 DPYSL3Q14195 570 aa11.4□□□□□ -0.59
COL2A1-208ENST00000493991 ZNF268Q14587 947 aaPredicted RBP11.4□□□□□ -0.59
COL2A1-208ENST00000493991 CHI3L2Q15782 390 aa11.4□□□□□ -0.59
COL2A1-208ENST00000493991 C1orf146Q5VVC0 180 aa11.4□□□□□ -0.59
COL2A1-208ENST00000493991 CRLF3Q8IUI8 442 aa11.4□□□□□ -0.59
COL2A1-208ENST00000493991 ZC3H3Q8IXZ2 948 aaKnown RBP11.4□□□□□ -0.59
COL2A1-208ENST00000493991 ART4Q93070 314 aa11.4□□□□□ -0.59
COL2A1-208ENST00000493991 KCNK16Q96T55 309 aa11.4□□□□□ -0.59
COL2A1-208ENST00000493991 THTPAQ9BU02 230 aa11.4□□□□□ -0.59
COL2A1-208ENST00000493991 ZNF112Q9UJU3 913 aa11.4□□□□□ -0.59
COL2A1-208ENST00000493991 ITGA11Q9UKX5 1188 aa11.4□□□□□ -0.59
COL2A1-208ENST00000493991 ATXN8OSP0DMR3 200 aa11.39□□□□□ -0.59
COL2A1-208ENST00000493991 SLC6A3Q01959 620 aa11.39□□□□□ -0.59
COL2A1-208ENST00000493991 PTK6Q13882 451 aa11.39□□□□□ -0.59
COL2A1-208ENST00000493991 DCAF4L1Q3SXM0 396 aa11.39□□□□□ -0.59
COL2A1-208ENST00000493991 DUSP28Q4G0W2 176 aa11.39□□□□□ -0.59
COL2A1-208ENST00000493991 TSHZ1Q6ZSZ6 1077 aa11.39□□□□□ -0.59
COL2A1-208ENST00000493991 NPLOC4Q8TAT6 608 aa11.39□□□□□ -0.59
COL2A1-208ENST00000493991 TFB1MQ8WVM0 346 aaKnown RBP11.39□□□□□ -0.59
COL2A1-208ENST00000493991 ZBED3Q96IU2 234 aaPredicted RBP11.39□□□□□ -0.59
COL2A1-208ENST00000493991 TBCBQ99426 244 aa11.39□□□□□ -0.59
COL2A1-208ENST00000493991 ROPN1BQ9BZX4 212 aaPredicted RBP11.39□□□□□ -0.59
COL2A1-208ENST00000493991 ROPN1Q9HAT0 212 aaPredicted RBP11.39□□□□□ -0.59
COL2A1-208ENST00000493991 PCDH9Q9HC56 1237 aa11.39□□□□□ -0.59
COL2A1-208ENST00000493991 SLC39A10Q9ULF5 831 aa11.39□□□□□ -0.59
COL2A1-208ENST00000493991 ST3GAL5Q9UNP4 418 aa11.39□□□□□ -0.59
COL2A1-208ENST00000493991 NAV1Q8NEY1 1877 aa11.39□□□□□ -0.59
COL2A1-208ENST00000493991 WDR27A2RRH5 827 aa11.39□□□□□ -0.59
COL2A1-208ENST00000493991 C2orf71A6NGG8 1288 aa11.39□□□□□ -0.59
COL2A1-208ENST00000493991 RASSF9O75901 435 aa11.39□□□□□ -0.59
COL2A1-208ENST00000493991 PSEN1P49768 467 aa11.39□□□□□ -0.59
COL2A1-208ENST00000493991 BST2Q10589 180 aaKnown RBP11.39□□□□□ -0.59
COL2A1-208ENST00000493991 TAF1BQ53T94 588 aaPredicted RBP11.39□□□□□ -0.59
COL2A1-208ENST00000493991 GLB1LQ6UWU2 654 aa11.39□□□□□ -0.59
COL2A1-208ENST00000493991 RGS9BPQ6ZS82 235 aa11.39□□□□□ -0.59
COL2A1-208ENST00000493991 BZW1Q7L1Q6 419 aaKnown RBP11.39□□□□□ -0.59
COL2A1-208ENST00000493991 DEFB128Q7Z7B8 93 aa11.39□□□□□ -0.59
COL2A1-208ENST00000493991 COLGALT1Q8NBJ5 622 aa11.39□□□□□ -0.59
COL2A1-208ENST00000493991 SMC1BQ8NDV3 1235 aa11.39□□□□□ -0.59
COL2A1-208ENST00000493991 CCT6BQ92526 530 aa11.39□□□□□ -0.59
COL2A1-208ENST00000493991 RHOBTB2Q9BYZ6 727 aa11.39□□□□□ -0.59
COL2A1-208ENST00000493991 CYP3A43Q9HB55 503 aa11.39□□□□□ -0.59
COL2A1-208ENST00000493991 C20orf96Q9NUD7 363 aaPredicted RBP11.39□□□□□ -0.59
COL2A1-208ENST00000493991 STOML1Q9UBI4 398 aa11.39□□□□□ -0.59
COL2A1-208ENST00000493991 SIX4Q9UIU6 781 aa11.39□□□□□ -0.59
COL2A1-208ENST00000493991 A0A1B0GUL6 1792 aa11.39□□□□□ -0.59
COL2A1-208ENST00000493991 NVLO15381 856 aaKnown RBP11.39□□□□□ -0.59
COL2A1-208ENST00000493991 CYP1A1P04798 512 aaPredicted RBP11.39□□□□□ -0.59
COL2A1-208ENST00000493991 STIP1P31948 543 aaKnown RBP11.39□□□□□ -0.59
COL2A1-208ENST00000493991 PGM1P36871 562 aa11.39□□□□□ -0.59
COL2A1-208ENST00000493991 CASP2P42575 452 aa11.39□□□□□ -0.59
COL2A1-208ENST00000493991 ASPAP45381 313 aa11.39□□□□□ -0.59
COL2A1-208ENST00000493991 FLT3LGP49771 235 aa11.39□□□□□ -0.59
COL2A1-208ENST00000493991 TSTA3Q13630 321 aaPredicted RBP11.39□□□□□ -0.59
COL2A1-208ENST00000493991 POU6F1Q14863 301 aa11.39□□□□□ -0.59
COL2A1-208ENST00000493991 MORF4L2Q15014 288 aa11.39□□□□□ -0.59
COL2A1-208ENST00000493991 FASTKD1Q53R41 847 aaKnown RBP11.39□□□□□ -0.59
COL2A1-208ENST00000493991 EFHC1Q5JVL4 640 aa11.39□□□□□ -0.59
COL2A1-208ENST00000493991 XYLT1Q86Y38 959 aa11.39□□□□□ -0.59
COL2A1-208ENST00000493991 LRRC43Q8N309 656 aa11.39□□□□□ -0.59
COL2A1-208ENST00000493991 CEP70Q8NHQ1 597 aa11.39□□□□□ -0.59
COL2A1-208ENST00000493991 SLC26A7Q8TE54 656 aa11.39□□□□□ -0.59
COL2A1-208ENST00000493991 FGD4Q96M96 766 aa11.39□□□□□ -0.59
COL2A1-208ENST00000493991 GLT1D1Q96MS3 346 aa11.39□□□□□ -0.59
COL2A1-208ENST00000493991 EPAS1Q99814 870 aa11.39□□□□□ -0.59
COL2A1-208ENST00000493991 MYLK2Q9H1R3 596 aa11.39□□□□□ -0.59
COL2A1-208ENST00000493991 MAP1BP46821 2468 aaKnown RBP11.38□□□□□ -0.59
COL2A1-208ENST00000493991 TCRBV7S3A2A0A539 114 aa11.38□□□□□ -0.59
COL2A1-208ENST00000493991 B4GALT4O60513 344 aa11.38□□□□□ -0.59
COL2A1-208ENST00000493991 MGAT1P26572 445 aa11.38□□□□□ -0.59
COL2A1-208ENST00000493991 GARSP41250 739 aaKnown RBP11.38□□□□□ -0.59
COL2A1-208ENST00000493991 RPL10AP62906 217 aaKnown RBP11.38□□□□□ -0.59
COL2A1-208ENST00000493991 ASPHQ12797 758 aa11.38□□□□□ -0.59
COL2A1-208ENST00000493991 FOXD4Q12950 439 aaPredicted RBP11.38□□□□□ -0.59
COL2A1-208ENST00000493991 MAP7D1Q3KQU3 841 aa11.38□□□□□ -0.59
COL2A1-208ENST00000493991 MECRQ9BV79 373 aa11.38□□□□□ -0.59
COL2A1-208ENST00000493991 PAPOLBQ9NRJ5 636 aaKnown RBP11.38□□□□□ -0.59
COL2A1-208ENST00000493991 HEY2Q9UBP5 337 aa11.38□□□□□ -0.59
COL2A1-208ENST00000493991 MYO18AQ92614 2054 aaKnown RBP11.38□□□□□ -0.59
COL2A1-208ENST00000493991 MEIS3P2A8K0S8 358 aa11.38□□□□□ -0.59
COL2A1-208ENST00000493991 CILPO75339 1184 aa11.38□□□□□ -0.59
COL2A1-208ENST00000493991 DGKIO75912 1065 aa11.38□□□□□ -0.59
COL2A1-208ENST00000493991 DCTN3O75935 186 aa11.38□□□□□ -0.59
COL2A1-208ENST00000493991 TRUB2O95900 331 aaKnown RBP11.38□□□□□ -0.59
COL2A1-208ENST00000493991 KCNA4P22459 653 aa11.38□□□□□ -0.59
COL2A1-208ENST00000493991 DNAJB2P25686 324 aa11.38□□□□□ -0.59
COL2A1-208ENST00000493991 NCALDP61601 193 aa11.38□□□□□ -0.59
COL2A1-208ENST00000493991 EFEMP1Q12805 493 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms