RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 MYO6Q9UM54 1294 aa12.84□□□□□ -0.35
UPF3A-210ENST00000493727 DENND4CQ5VZ89 1909 aa12.84□□□□□ -0.35
UPF3A-210ENST00000493727 SDK1Q7Z5N4 2213 aa12.84□□□□□ -0.35
UPF3A-210ENST00000493727 NRDCO43847 1150 aa12.83□□□□□ -0.36
UPF3A-210ENST00000493727 GFPT2O94808 682 aa12.83□□□□□ -0.36
UPF3A-210ENST00000493727 PNMA6AP0CW24 399 aaPredicted RBP12.83□□□□□ -0.36
UPF3A-210ENST00000493727 SOX5P35711 763 aa12.83□□□□□ -0.36
UPF3A-210ENST00000493727 CCR2P41597 374 aa12.83□□□□□ -0.36
UPF3A-210ENST00000493727 CDH8P55286 799 aa12.83□□□□□ -0.36
UPF3A-210ENST00000493727 JAM2P57087 298 aa12.83□□□□□ -0.36
UPF3A-210ENST00000493727 ARID5AQ03989 594 aa12.83□□□□□ -0.36
UPF3A-210ENST00000493727 MTAPQ13126 283 aa12.83□□□□□ -0.36
UPF3A-210ENST00000493727 TMEM270Q6UE05 265 aa12.83□□□□□ -0.36
UPF3A-210ENST00000493727 CCDC186Q7Z3E2 898 aa12.83□□□□□ -0.36
UPF3A-210ENST00000493727 ITIH5Q86UX2 942 aa12.83□□□□□ -0.36
UPF3A-210ENST00000493727 PDCL2Q8N4E4 241 aa12.83□□□□□ -0.36
UPF3A-210ENST00000493727 TOP6BLQ8N6T0 577 aa12.83□□□□□ -0.36
UPF3A-210ENST00000493727 OR6B3Q8NGW1 331 aa12.83□□□□□ -0.36
UPF3A-210ENST00000493727 ZSCAN18Q8TBC5 510 aaPredicted RBP12.83□□□□□ -0.36
UPF3A-210ENST00000493727 SECISBP2LQ93073 1101 aaKnown RBP12.83□□□□□ -0.36
UPF3A-210ENST00000493727 JAKMIP2Q96AA8 810 aa12.83□□□□□ -0.36
UPF3A-210ENST00000493727 MSANTD3Q96H12 275 aa12.83□□□□□ -0.36
UPF3A-210ENST00000493727 FAM126AQ9BYI3 521 aaPredicted RBP12.83□□□□□ -0.36
UPF3A-210ENST00000493727 SLITRK6Q9H5Y7 841 aa12.83□□□□□ -0.36
UPF3A-210ENST00000493727 HEBP1Q9NRV9 189 aa12.83□□□□□ -0.36
UPF3A-210ENST00000493727 ABHD10Q9NUJ1 306 aa12.83□□□□□ -0.36
UPF3A-210ENST00000493727 L1RE1Q9UN81 338 aa12.83□□□□□ -0.36
UPF3A-210ENST00000493727 TIMM13Q9Y5L4 95 aaPredicted RBP12.83□□□□□ -0.36
UPF3A-210ENST00000493727 FOXN3O00409 490 aaPredicted RBP12.82□□□□□ -0.36
UPF3A-210ENST00000493727 ZNF263O14978 683 aa12.82□□□□□ -0.36
UPF3A-210ENST00000493727 BNIP3LO60238 219 aa12.82□□□□□ -0.36
UPF3A-210ENST00000493727 CYP11A1P05108 521 aa12.82□□□□□ -0.36
UPF3A-210ENST00000493727 ADRB1P08588 477 aa12.82□□□□□ -0.36
UPF3A-210ENST00000493727 FERP16591 822 aa12.82□□□□□ -0.36
UPF3A-210ENST00000493727 MLLT6P55198 1093 aaPredicted RBP12.82□□□□□ -0.36
UPF3A-210ENST00000493727 SMARCB1Q12824 385 aa12.82□□□□□ -0.36
UPF3A-210ENST00000493727 DUSP4Q13115 394 aa12.82□□□□□ -0.36
UPF3A-210ENST00000493727 GRM2Q14416 872 aa12.82□□□□□ -0.36
UPF3A-210ENST00000493727 PPP2R5DQ14738 602 aa12.82□□□□□ -0.36
UPF3A-210ENST00000493727 SOWAHAQ2M3V2 549 aa12.82□□□□□ -0.36
UPF3A-210ENST00000493727 ZNF394Q53GI3 561 aa12.82□□□□□ -0.36
UPF3A-210ENST00000493727 TDRD12Q587J7 1177 aaKnown RBP12.82□□□□□ -0.36
UPF3A-210ENST00000493727 SAMD5Q5TGI4 173 aa12.82□□□□□ -0.36
UPF3A-210ENST00000493727 WSCD1Q658N2 575 aa12.82□□□□□ -0.36
UPF3A-210ENST00000493727 FIGNL1Q6PIW4 674 aa12.82□□□□□ -0.36
UPF3A-210ENST00000493727 VITQ6UXI7 678 aa12.82□□□□□ -0.36
UPF3A-210ENST00000493727 DPH6Q7L8W6 267 aa12.82□□□□□ -0.36
UPF3A-210ENST00000493727 MFSD6LQ8IWD5 586 aa12.82□□□□□ -0.36
UPF3A-210ENST00000493727 YAF2Q8IY57 180 aa12.82□□□□□ -0.36
UPF3A-210ENST00000493727 TMEM86AQ8N2M4 240 aa12.82□□□□□ -0.36
UPF3A-210ENST00000493727 RBBP8NLQ8NC74 664 aaPredicted RBP12.82□□□□□ -0.36
UPF3A-210ENST00000493727 OR8K1Q8NGG5 319 aa12.82□□□□□ -0.36
UPF3A-210ENST00000493727 SPATA18Q8TC71 538 aa12.82□□□□□ -0.36
UPF3A-210ENST00000493727 SHC3Q92529 594 aa12.82□□□□□ -0.36
UPF3A-210ENST00000493727 PGLYRP2Q96PD5 576 aa12.82□□□□□ -0.36
UPF3A-210ENST00000493727 MRPL45Q9BRJ2 306 aaKnown RBP12.82□□□□□ -0.36
UPF3A-210ENST00000493727 SDCBP2Q9H190 292 aa12.82□□□□□ -0.36
UPF3A-210ENST00000493727 CHRDQ9H2X0 955 aa12.82□□□□□ -0.36
UPF3A-210ENST00000493727 ZNF334Q9HCZ1 680 aaPredicted RBP12.82□□□□□ -0.36
UPF3A-210ENST00000493727 USP18Q9UMW8 372 aa12.82□□□□□ -0.36
UPF3A-210ENST00000493727 PCDHGC4Q9Y5F7 938 aa12.82□□□□□ -0.36
UPF3A-210ENST00000493727 CEP295Q9C0D2 2601 aa12.82□□□□□ -0.36
UPF3A-210ENST00000493727 FRYQ5TBA9 3013 aa12.81□□□□□ -0.36
UPF3A-210ENST00000493727 FAM208BQ5VWN6 2430 aa12.81□□□□□ -0.36
UPF3A-210ENST00000493727 ASPMQ8IZT6 3477 aa12.81□□□□□ -0.36
UPF3A-210ENST00000493727 DCDC2BA2VCK2 349 aa12.81□□□□□ -0.36
UPF3A-210ENST00000493727 MTMR11A4FU01 709 aa12.81□□□□□ -0.36
UPF3A-210ENST00000493727 A8MXQ7 604 aa12.81□□□□□ -0.36
UPF3A-210ENST00000493727 RNF225M0QZC1 329 aaPredicted RBP12.81□□□□□ -0.36
UPF3A-210ENST00000493727 CYP26A1O43174 497 aa12.81□□□□□ -0.36
UPF3A-210ENST00000493727 TACC1O75410 805 aa12.81□□□□□ -0.36
UPF3A-210ENST00000493727 MOSPD3O75425 235 aa12.81□□□□□ -0.36
UPF3A-210ENST00000493727 FAM163BP0C2L3 166 aa12.81□□□□□ -0.36
UPF3A-210ENST00000493727 OR4Q2P0C623 313 aa12.81□□□□□ -0.36
UPF3A-210ENST00000493727 ACO1P21399 889 aaKnown RBP12.81□□□□□ -0.36
UPF3A-210ENST00000493727 WARSP23381 471 aaKnown RBP12.81□□□□□ -0.36
UPF3A-210ENST00000493727 GDI1P31150 447 aa12.81□□□□□ -0.36
UPF3A-210ENST00000493727 GNL1P36915 607 aaPredicted RBP12.81□□□□□ -0.36
UPF3A-210ENST00000493727 TUFMP49411 452 aaKnown RBP12.81□□□□□ -0.36
UPF3A-210ENST00000493727 PDE6CP51160 858 aa12.81□□□□□ -0.36
UPF3A-210ENST00000493727 BPIFB4P59827 614 aa12.81□□□□□ -0.36
UPF3A-210ENST00000493727 VEPH1Q14D04 833 aa12.81□□□□□ -0.36
UPF3A-210ENST00000493727 TEAD2Q15562 447 aa12.81□□□□□ -0.36
UPF3A-210ENST00000493727 ARHGAP15Q53QZ3 475 aa12.81□□□□□ -0.36
UPF3A-210ENST00000493727 LRRC69Q6ZNQ3 347 aa12.81□□□□□ -0.36
UPF3A-210ENST00000493727 THEM5Q8N1Q8 247 aa12.81□□□□□ -0.36
UPF3A-210ENST00000493727 TC2NQ8N9U0 490 aa12.81□□□□□ -0.36
UPF3A-210ENST00000493727 SHKBP1Q8TBC3 707 aa12.81□□□□□ -0.36
UPF3A-210ENST00000493727 C2orf15Q8WU43 125 aaKnown RBP12.81□□□□□ -0.36
UPF3A-210ENST00000493727 PPP1R9BQ96SB3 815 aa12.81□□□□□ -0.36
UPF3A-210ENST00000493727 DNAJC7Q99615 494 aa12.81□□□□□ -0.36
UPF3A-210ENST00000493727 ZMYM5Q9UJ78 669 aa12.81□□□□□ -0.36
UPF3A-210ENST00000493727 GMEB2Q9UKD1 530 aa12.81□□□□□ -0.36
UPF3A-210ENST00000493727 HCN2Q9UL51 889 aa12.81□□□□□ -0.36
UPF3A-210ENST00000493727 GREB1Q4ZG55 1949 aa12.81□□□□□ -0.36
UPF3A-210ENST00000493727 HEPACAM2A8MVW5 462 aa12.8□□□□□ -0.36
UPF3A-210ENST00000493727 ATXN7O15265 892 aaPredicted RBP12.8□□□□□ -0.36
UPF3A-210ENST00000493727 CHADO15335 359 aa12.8□□□□□ -0.36
UPF3A-210ENST00000493727 CILPO75339 1184 aa12.8□□□□□ -0.36
UPF3A-210ENST00000493727 VNN2O95498 520 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms