RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, human

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMC4-223	ENST00000493695	TNFRSF8	P28908	595 aa		4.98	□□□□□ -1.61
SMC4-223	ENST00000493695	CPT1A	P50416	773 aa		4.98	□□□□□ -1.61
SMC4-223	ENST00000493695	PGGT1B	P53609	377 aa		4.98	□□□□□ -1.61
SMC4-223	ENST00000493695	KCNAB1	Q14722	419 aa		4.98	□□□□□ -1.61
SMC4-223	ENST00000493695	CNGA3	Q16281	694 aa		4.98	□□□□□ -1.61
SMC4-223	ENST00000493695	C3orf38	Q5JPI3	329 aa		4.98	□□□□□ -1.61
SMC4-223	ENST00000493695	USP49	Q70CQ1	688 aa		4.98	□□□□□ -1.61
SMC4-223	ENST00000493695	TRAPPC11	Q7Z392	1133 aa		4.98	□□□□□ -1.61
SMC4-223	ENST00000493695	MICU3	Q86XE3	530 aa		4.98	□□□□□ -1.61
SMC4-223	ENST00000493695	UEVLD	Q8IX04	471 aa		4.98	□□□□□ -1.61
SMC4-223	ENST00000493695	YAF2	Q8IY57	180 aa		4.98	□□□□□ -1.61
SMC4-223	ENST00000493695	IGFBPL1	Q8WX77	278 aa		4.98	□□□□□ -1.61
SMC4-223	ENST00000493695	ZNF668	Q96K58	619 aa	Predicted RBP	4.98	□□□□□ -1.61
SMC4-223	ENST00000493695	MYLK2	Q9H1R3	596 aa		4.98	□□□□□ -1.61
SMC4-223	ENST00000493695	IPO11	Q9UI26	975 aa	Known RBP	4.98	□□□□□ -1.61
SMC4-223	ENST00000493695	ZNF180	Q9UJW8	692 aa		4.98	□□□□□ -1.61
SMC4-223	ENST00000493695	CAPN8	A6NHC0	703 aa		4.97	□□□□□ -1.61
SMC4-223	ENST00000493695	IFITM10	A6NMD0	228 aa		4.97	□□□□□ -1.61
SMC4-223	ENST00000493695	PPM1G	O15355	546 aa	Predicted RBP	4.97	□□□□□ -1.61
SMC4-223	ENST00000493695	RPS6KB1	P23443	525 aa		4.97	□□□□□ -1.61
SMC4-223	ENST00000493695	HOXA7	P31268	230 aa	Predicted RBP	4.97	□□□□□ -1.61
SMC4-223	ENST00000493695	P2RX3	P56373	397 aa		4.97	□□□□□ -1.61
SMC4-223	ENST00000493695	INPP5J	Q15735	1006 aa	Predicted RBP	4.97	□□□□□ -1.61
SMC4-223	ENST00000493695	ZNF324B	Q6AW86	544 aa	Predicted RBP	4.97	□□□□□ -1.61
SMC4-223	ENST00000493695	MAEA	Q7L5Y9	396 aa		4.97	□□□□□ -1.61
SMC4-223	ENST00000493695	TFAP2D	Q7Z6R9	452 aa		4.97	□□□□□ -1.61
SMC4-223	ENST00000493695	TPH2	Q8IWU9	490 aa		4.97	□□□□□ -1.61
SMC4-223	ENST00000493695	SLC35G2	Q8TBE7	412 aa		4.97	□□□□□ -1.61
SMC4-223	ENST00000493695	NEUROG1	Q92886	237 aa		4.97	□□□□□ -1.61
SMC4-223	ENST00000493695	MED30	Q96HR3	178 aa		4.97	□□□□□ -1.61
SMC4-223	ENST00000493695	KAZALD1	Q96I82	304 aa		4.97	□□□□□ -1.61
SMC4-223	ENST00000493695	MEIS3	Q99687	375 aa		4.97	□□□□□ -1.61
SMC4-223	ENST00000493695	ZCWPW1	Q9H0M4	648 aa		4.97	□□□□□ -1.61
SMC4-223	ENST00000493695	ATP6V0A4	Q9HBG4	840 aa		4.97	□□□□□ -1.61
SMC4-223	ENST00000493695	STK32B	Q9NY57	414 aa		4.97	□□□□□ -1.61
SMC4-223	ENST00000493695	DNAJB11	Q9UBS4	358 aa		4.97	□□□□□ -1.61
SMC4-223	ENST00000493695	MID2	Q9UJV3	735 aa		4.97	□□□□□ -1.61
SMC4-223	ENST00000493695	PNMA8B	Q9ULN7	279 aa	Predicted RBP	4.97	□□□□□ -1.61
SMC4-223	ENST00000493695	EVPL	Q92817	2033 aa		4.96	□□□□□ -1.62
SMC4-223	ENST00000493695	TRIM43B	A6NCK2	446 aa		4.96	□□□□□ -1.62
SMC4-223	ENST00000493695	ZNF814	B7Z6K7	855 aa		4.96	□□□□□ -1.62
SMC4-223	ENST00000493695	EPN2	O95208	641 aa		4.96	□□□□□ -1.62
SMC4-223	ENST00000493695	MT3	P25713	68 aa		4.96	□□□□□ -1.62
SMC4-223	ENST00000493695	RBL1	P28749	1068 aa		4.96	□□□□□ -1.62
SMC4-223	ENST00000493695	NFATC4	Q14934	902 aa		4.96	□□□□□ -1.62
SMC4-223	ENST00000493695	NUGGC	Q68CJ6	796 aa		4.96	□□□□□ -1.62
SMC4-223	ENST00000493695	RBM44	Q6ZP01	1051 aa	Known RBP	4.96	□□□□□ -1.62
SMC4-223	ENST00000493695	RFX6	Q8HWS3	928 aa		4.96	□□□□□ -1.62
SMC4-223	ENST00000493695	WIPF2	Q8TF74	440 aa	Predicted RBP	4.96	□□□□□ -1.62
SMC4-223	ENST00000493695	TRIM43	Q96BQ3	446 aa	Predicted RBP	4.96	□□□□□ -1.62
SMC4-223	ENST00000493695	PRR11	Q96HE9	360 aa	Predicted RBP	4.96	□□□□□ -1.62
SMC4-223	ENST00000493695	SF3B5	Q9BWJ5	86 aa	Known RBP	4.96	□□□□□ -1.62
SMC4-223	ENST00000493695	ARHGAP39	Q9C0H5	1083 aa		4.96	□□□□□ -1.62
SMC4-223	ENST00000493695	MOV10	Q9HCE1	1003 aa	Known RBP	4.96	□□□□□ -1.62
SMC4-223	ENST00000493695	MLXIPL	Q9NP71	852 aa		4.96	□□□□□ -1.62
SMC4-223	ENST00000493695	PAPOLB	Q9NRJ5	636 aa	Known RBP	4.96	□□□□□ -1.62
SMC4-223	ENST00000493695	VPS45	Q9NRW7	570 aa		4.96	□□□□□ -1.62
SMC4-223	ENST00000493695	AFF4	Q9UHB7	1163 aa	Known RBP	4.96	□□□□□ -1.62
SMC4-223	ENST00000493695	TPCN1	Q9ULQ1	816 aa		4.96	□□□□□ -1.62
SMC4-223	ENST00000493695	PCDHB2	Q9Y5E7	798 aa		4.96	□□□□□ -1.62
SMC4-223	ENST00000493695		H0YGN5	161 aa		4.95	□□□□□ -1.62
SMC4-223	ENST00000493695	CTNND1	O60716	968 aa	Known RBP	4.95	□□□□□ -1.62
SMC4-223	ENST00000493695	TBXAS1	P24557	533 aa	Predicted RBP	4.95	□□□□□ -1.62
SMC4-223	ENST00000493695	HOXA11	P31270	313 aa	Predicted RBP	4.95	□□□□□ -1.62
SMC4-223	ENST00000493695	ENTPD1	P49961	510 aa		4.95	□□□□□ -1.62
SMC4-223	ENST00000493695	AGFG1	P52594	562 aa	Known RBP	4.95	□□□□□ -1.62
SMC4-223	ENST00000493695	RPS16	P62249	146 aa	Known RBP	4.95	□□□□□ -1.62
SMC4-223	ENST00000493695	RAE1	P78406	368 aa	Known RBP	4.95	□□□□□ -1.62
SMC4-223	ENST00000493695	PDXDC1	Q6P996	788 aa		4.95	□□□□□ -1.62
SMC4-223	ENST00000493695	B3GNT9	Q6UX72	402 aa		4.95	□□□□□ -1.62
SMC4-223	ENST00000493695	BCAS4	Q8TDM0	211 aa		4.95	□□□□□ -1.62
SMC4-223	ENST00000493695	NUDCD2	Q8WVJ2	157 aa		4.95	□□□□□ -1.62
SMC4-223	ENST00000493695	OIT3	Q8WWZ8	545 aa		4.95	□□□□□ -1.62
SMC4-223	ENST00000493695	TAAR9	Q96RI9	348 aa		4.95	□□□□□ -1.62
SMC4-223	ENST00000493695	AAMDC	Q9H7C9	122 aa		4.95	□□□□□ -1.62
SMC4-223	ENST00000493695	AGO4	Q9HCK5	861 aa	Known RBP	4.95	□□□□□ -1.62
SMC4-223	ENST00000493695	ASNSD1	Q9NWL6	643 aa		4.95	□□□□□ -1.62
SMC4-223	ENST00000493695	PCDHA12	Q9UN75	941 aa		4.95	□□□□□ -1.62
SMC4-223	ENST00000493695	THRAP3	Q9Y2W1	955 aa	Known RBP	4.95	□□□□□ -1.62
SMC4-223	ENST00000493695	TTC34	A8MYJ7	566 aa		4.94	□□□□□ -1.62
SMC4-223	ENST00000493695	AKAP10	O43572	662 aa		4.94	□□□□□ -1.62
SMC4-223	ENST00000493695	KRT86	O43790	486 aa		4.94	□□□□□ -1.62
SMC4-223	ENST00000493695	ALDH1L1	O75891	902 aa		4.94	□□□□□ -1.62
SMC4-223	ENST00000493695	INMT	O95050	263 aa		4.94	□□□□□ -1.62
SMC4-223	ENST00000493695	FGF2	P09038	288 aa		4.94	□□□□□ -1.62
SMC4-223	ENST00000493695	TFEB	P19484	476 aa		4.94	□□□□□ -1.62
SMC4-223	ENST00000493695	MLH1	P40692	756 aa		4.94	□□□□□ -1.62
SMC4-223	ENST00000493695	GAD2	Q05329	585 aa		4.94	□□□□□ -1.62
SMC4-223	ENST00000493695	MCL1	Q07820	350 aa		4.94	□□□□□ -1.62
SMC4-223	ENST00000493695	KRT81	Q14533	505 aa		4.94	□□□□□ -1.62
SMC4-223	ENST00000493695	KAT2B	Q92831	832 aa		4.94	□□□□□ -1.62
SMC4-223	ENST00000493695	AIFM3	Q96NN9	605 aa		4.94	□□□□□ -1.62
SMC4-223	ENST00000493695	PPP1R10	Q96QC0	940 aa	Known RBP	4.94	□□□□□ -1.62
SMC4-223	ENST00000493695	HTATIP2	Q9BUP3	242 aa		4.94	□□□□□ -1.62
SMC4-223	ENST00000493695	RHOBTB2	Q9BYZ6	727 aa		4.94	□□□□□ -1.62
SMC4-223	ENST00000493695	DHX36	Q9H2U1	1008 aa	Known RBP	4.94	□□□□□ -1.62
SMC4-223	ENST00000493695	FAM83D	Q9H4H8	585 aa		4.94	□□□□□ -1.62
SMC4-223	ENST00000493695	SAP30L	Q9HAJ7	183 aa		4.94	□□□□□ -1.62
SMC4-223	ENST00000493695	FZD3	Q9NPG1	666 aa		4.94	□□□□□ -1.62
SMC4-223	ENST00000493695	SELENON	Q9NZV5	590 aa		4.94	□□□□□ -1.62

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