RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 CDK5RAP1Q96SZ6 601 aaKnown RBP18.11■□□□□ 0.49
SGMS1-204ENST00000492601 ACOX2Q99424 681 aa18.11■□□□□ 0.49
SGMS1-204ENST00000492601 GTPBP4Q9BZE4 634 aaKnown RBP18.11■□□□□ 0.49
SGMS1-204ENST00000492601 ULBP1Q9BZM6 244 aa18.11■□□□□ 0.49
SGMS1-204ENST00000492601 FAM124BQ9H5Z6 455 aaPredicted RBP18.11■□□□□ 0.49
SGMS1-204ENST00000492601 MBD1Q9UIS9 605 aaPredicted RBP18.11■□□□□ 0.49
SGMS1-204ENST00000492601 TSPAN16Q9UKR8 245 aa18.11■□□□□ 0.49
SGMS1-204ENST00000492601 CACNA1BQ00975 2339 aa18.11■□□□□ 0.49
SGMS1-204ENST00000492601 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.1■□□□□ 0.49
SGMS1-204ENST00000492601 PRRT4C9JH25 899 aa18.1■□□□□ 0.49
SGMS1-204ENST00000492601 CORO1AP31146 461 aaKnown RBP18.1■□□□□ 0.49
SGMS1-204ENST00000492601 FMO5P49326 533 aa18.1■□□□□ 0.49
SGMS1-204ENST00000492601 BCAT1P54687 386 aa18.1■□□□□ 0.49
SGMS1-204ENST00000492601 YWHAGP61981 247 aaKnown RBP eCLIP18.1■□□□□ 0.49
SGMS1-204ENST00000492601 YWHAEP62258 255 aaKnown RBP18.1■□□□□ 0.49
SGMS1-204ENST00000492601 COG7P83436 770 aa18.1■□□□□ 0.49
SGMS1-204ENST00000492601 MAP7D1Q3KQU3 841 aa18.1■□□□□ 0.49
SGMS1-204ENST00000492601 TMEFF1Q8IYR6 380 aa18.1■□□□□ 0.49
SGMS1-204ENST00000492601 CHPFQ8IZ52 775 aa18.1■□□□□ 0.49
SGMS1-204ENST00000492601 ARHGAP18Q8N392 663 aa18.1■□□□□ 0.49
SGMS1-204ENST00000492601 UBA3Q8TBC4 463 aa18.1■□□□□ 0.49
SGMS1-204ENST00000492601 PIGKQ92643 395 aa18.1■□□□□ 0.49
SGMS1-204ENST00000492601 EDEM2Q9BV94 578 aa18.1■□□□□ 0.49
SGMS1-204ENST00000492601 METTL14Q9HCE5 456 aaKnown RBP18.1■□□□□ 0.49
SGMS1-204ENST00000492601 MARCH2Q9P0N8 246 aa18.1■□□□□ 0.49
SGMS1-204ENST00000492601 HESX1Q9UBX0 185 aa18.1■□□□□ 0.49
SGMS1-204ENST00000492601 ZNF510Q9Y2H8 683 aa18.1■□□□□ 0.49
SGMS1-204ENST00000492601 STARD13Q9Y3M8 1113 aa18.1■□□□□ 0.49
SGMS1-204ENST00000492601 SLC12A8A0AV02 714 aa18.09■□□□□ 0.49
SGMS1-204ENST00000492601 PATE3B3GLJ2 98 aa18.09■□□□□ 0.49
SGMS1-204ENST00000492601 XPO1O14980 1071 aaKnown RBP18.09■□□□□ 0.49
SGMS1-204ENST00000492601 ZBED1O96006 694 aa18.09■□□□□ 0.49
SGMS1-204ENST00000492601 ADRB1P08588 477 aa18.09■□□□□ 0.49
SGMS1-204ENST00000492601 CISD3P0C7P0 127 aa18.09■□□□□ 0.49
SGMS1-204ENST00000492601 GABRG2P18507 467 aa18.09■□□□□ 0.49
SGMS1-204ENST00000492601 ADIGQ0VDE8 80 aa18.09■□□□□ 0.49
SGMS1-204ENST00000492601 LPCAT2Q7L5N7 544 aa18.09■□□□□ 0.49
SGMS1-204ENST00000492601 DENND1CQ8IV53 801 aa18.09■□□□□ 0.49
SGMS1-204ENST00000492601 UBR7Q8N806 425 aa18.09■□□□□ 0.49
SGMS1-204ENST00000492601 CEP63Q96MT8 703 aa18.09■□□□□ 0.49
SGMS1-204ENST00000492601 DCLK3Q9C098 648 aa18.09■□□□□ 0.49
SGMS1-204ENST00000492601 LRRC4Q9HBW1 653 aa18.09■□□□□ 0.49
SGMS1-204ENST00000492601 STRIP2Q9ULQ0 834 aa18.09■□□□□ 0.49
SGMS1-204ENST00000492601 CKAP5Q14008 2032 aa18.09■□□□□ 0.49
SGMS1-204ENST00000492601 A0A1W2PQF6 199 aa18.08■□□□□ 0.48
SGMS1-204ENST00000492601 LNP1A1A4G5 178 aa18.08■□□□□ 0.48
SGMS1-204ENST00000492601 BIN1O00499 593 aa18.08■□□□□ 0.48
SGMS1-204ENST00000492601 TM4SF5O14894 197 aa18.08■□□□□ 0.48
SGMS1-204ENST00000492601 GADD45BO75293 160 aaPredicted RBP18.08■□□□□ 0.48
SGMS1-204ENST00000492601 VDRP11473 427 aa18.08■□□□□ 0.48
SGMS1-204ENST00000492601 BMP6P22004 513 aa18.08■□□□□ 0.48
SGMS1-204ENST00000492601 TBXAS1P24557 533 aaPredicted RBP18.08■□□□□ 0.48
SGMS1-204ENST00000492601 PTGER3P43115 390 aa18.08■□□□□ 0.48
SGMS1-204ENST00000492601 BST2Q10589 180 aaKnown RBP18.08■□□□□ 0.48
SGMS1-204ENST00000492601 BYSLQ13895 437 aaKnown RBP18.08■□□□□ 0.48
SGMS1-204ENST00000492601 PM20D1Q6GTS8 502 aa18.08■□□□□ 0.48
SGMS1-204ENST00000492601 SDE2Q6IQ49 451 aa18.08■□□□□ 0.48
SGMS1-204ENST00000492601 KIAA1211LQ6NV74 962 aa18.08■□□□□ 0.48
SGMS1-204ENST00000492601 TMEM270Q6UE05 265 aa18.08■□□□□ 0.48
SGMS1-204ENST00000492601 NELFBQ8WX92 580 aa18.08■□□□□ 0.48
SGMS1-204ENST00000492601 DDX1Q92499 740 aaKnown RBP18.08■□□□□ 0.48
SGMS1-204ENST00000492601 NT5C1BQ96P26 610 aa18.08■□□□□ 0.48
SGMS1-204ENST00000492601 IPO9Q96P70 1041 aaKnown RBP18.08■□□□□ 0.48
SGMS1-204ENST00000492601 CACNA2D2Q9NY47 1150 aa18.08■□□□□ 0.48
SGMS1-204ENST00000492601 CALCOCO1Q9P1Z2 691 aa18.08■□□□□ 0.48
SGMS1-204ENST00000492601 AGO1Q9UL18 857 aaKnown RBP18.08■□□□□ 0.48
SGMS1-204ENST00000492601 CTNND2Q9UQB3 1225 aa18.08■□□□□ 0.48
SGMS1-204ENST00000492601 PCDHB4Q9Y5E5 795 aa18.08■□□□□ 0.48
SGMS1-204ENST00000492601 RAD54BQ9Y620 910 aa18.08■□□□□ 0.48
SGMS1-204ENST00000492601 C4orf47A7E2U8 309 aa18.07■□□□□ 0.48
SGMS1-204ENST00000492601 PPP1R3GB7ZBB8 358 aa18.07■□□□□ 0.48
SGMS1-204ENST00000492601 WASH3PC4AMC7 463 aa18.07■□□□□ 0.48
SGMS1-204ENST00000492601 O00370 1275 aa18.07■□□□□ 0.48
SGMS1-204ENST00000492601 KHNYNO15037 678 aaKnown RBP18.07■□□□□ 0.48
SGMS1-204ENST00000492601 CHKAP35790 457 aa18.07■□□□□ 0.48
SGMS1-204ENST00000492601 FYB2Q5VWT5 728 aa18.07■□□□□ 0.48
SGMS1-204ENST00000492601 TTI2Q6NXR4 508 aa18.07■□□□□ 0.48
SGMS1-204ENST00000492601 BHLHA9Q7RTU4 235 aa18.07■□□□□ 0.48
SGMS1-204ENST00000492601 ELOA2Q8IYF1 753 aaPredicted RBP18.07■□□□□ 0.48
SGMS1-204ENST00000492601 DEFB119Q8N690 84 aa18.07■□□□□ 0.48
SGMS1-204ENST00000492601 IPO4Q8TEX9 1081 aaKnown RBP18.07■□□□□ 0.48
SGMS1-204ENST00000492601 TFAP2BQ92481 460 aa18.07■□□□□ 0.48
SGMS1-204ENST00000492601 EDEM1Q92611 657 aa18.07■□□□□ 0.48
SGMS1-204ENST00000492601 KAT5Q92993 513 aa18.07■□□□□ 0.48
SGMS1-204ENST00000492601 CNTNAP3BQ96NU0 1288 aa18.07■□□□□ 0.48
SGMS1-204ENST00000492601 CNTNAP3Q9BZ76 1288 aa18.07■□□□□ 0.48
SGMS1-204ENST00000492601 FBXO10Q9UK96 956 aa18.07■□□□□ 0.48
SGMS1-204ENST00000492601 CEP295Q9C0D2 2601 aa18.06■□□□□ 0.48
SGMS1-204ENST00000492601 ATXN2Q99700 1313 aaKnown RBP18.06■□□□□ 0.48
SGMS1-204ENST00000492601 PCNX2A6NKB5 2137 aa18.06■□□□□ 0.48
SGMS1-204ENST00000492601 YJEFN3A6XGL0 299 aa18.06■□□□□ 0.48
SGMS1-204ENST00000492601 E7ENQ6 273 aa18.06■□□□□ 0.48
SGMS1-204ENST00000492601 ZBTB24O43167 697 aaPredicted RBP18.06■□□□□ 0.48
SGMS1-204ENST00000492601 PENKP01210 267 aaPredicted RBP18.06■□□□□ 0.48
SGMS1-204ENST00000492601 CALCAP01258 141 aa18.06■□□□□ 0.48
SGMS1-204ENST00000492601 LCP1P13796 627 aa18.06■□□□□ 0.48
SGMS1-204ENST00000492601 PPP1R2P41236 205 aa18.06■□□□□ 0.48
SGMS1-204ENST00000492601 RGS7P49802 495 aa18.06■□□□□ 0.48
SGMS1-204ENST00000492601 STX17P56962 302 aa18.06■□□□□ 0.48
SGMS1-204ENST00000492601 IRX4P78413 519 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms