RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 B3GNT5Q9BYG0 378 aa16.7■□□□□ 0.26
SEMA4D-220ENST00000492386 CXCL16Q9H2A7 254 aa16.7■□□□□ 0.26
SEMA4D-220ENST00000492386 ZNF395Q9H8N7 513 aaPredicted RBP16.7■□□□□ 0.26
SEMA4D-220ENST00000492386 FAM49BQ9NUQ9 324 aa16.7■□□□□ 0.26
SEMA4D-220ENST00000492386 CAPN14A8MX76 684 aa16.7■□□□□ 0.26
SEMA4D-220ENST00000492386 LGALS2P05162 132 aa16.7■□□□□ 0.26
SEMA4D-220ENST00000492386 TPSB2P20231 275 aa16.7■□□□□ 0.26
SEMA4D-220ENST00000492386 L1CAMP32004 1257 aa16.7■□□□□ 0.26
SEMA4D-220ENST00000492386 GCKP35557 465 aa16.7■□□□□ 0.26
SEMA4D-220ENST00000492386 TMPRSS15P98073 1019 aa16.7■□□□□ 0.26
SEMA4D-220ENST00000492386 KPNB1Q14974 876 aaKnown RBP16.7■□□□□ 0.26
SEMA4D-220ENST00000492386 TPSAB1Q15661 275 aa16.7■□□□□ 0.26
SEMA4D-220ENST00000492386 GJC2Q5T442 439 aaPredicted RBP16.7■□□□□ 0.26
SEMA4D-220ENST00000492386 TRIM68Q6AZZ1 485 aa16.7■□□□□ 0.26
SEMA4D-220ENST00000492386 C4orf22Q6V702 233 aa16.7■□□□□ 0.26
SEMA4D-220ENST00000492386 SESTD1Q86VW0 696 aa16.7■□□□□ 0.26
SEMA4D-220ENST00000492386 NT5DC4Q86YG4 428 aa16.7■□□□□ 0.26
SEMA4D-220ENST00000492386 KIF12Q96FN5 646 aa16.7■□□□□ 0.26
SEMA4D-220ENST00000492386 MAGEB5Q9BZ81 275 aa16.7■□□□□ 0.26
SEMA4D-220ENST00000492386 MMADHCQ9H3L0 296 aaPredicted RBP16.7■□□□□ 0.26
SEMA4D-220ENST00000492386 CCDC195A0A1B0GUA6 201 aa16.69■□□□□ 0.26
SEMA4D-220ENST00000492386 SETSIPP0DME0 302 aa16.69■□□□□ 0.26
SEMA4D-220ENST00000492386 CHI3L2Q15782 390 aa16.69■□□□□ 0.26
SEMA4D-220ENST00000492386 DPYSL2Q16555 572 aa16.69■□□□□ 0.26
SEMA4D-220ENST00000492386 ATG16L1Q676U5 607 aa16.69■□□□□ 0.26
SEMA4D-220ENST00000492386 TEX9Q8N6V9 391 aa16.69■□□□□ 0.26
SEMA4D-220ENST00000492386 WDR60Q8WVS4 1066 aa16.69■□□□□ 0.26
SEMA4D-220ENST00000492386 MCUR1Q96AQ8 359 aa16.69■□□□□ 0.26
SEMA4D-220ENST00000492386 C11orf84Q9BUA3 381 aaPredicted RBP16.69■□□□□ 0.26
SEMA4D-220ENST00000492386 PCMTD2Q9NV79 361 aa16.69■□□□□ 0.26
SEMA4D-220ENST00000492386 CORO1CQ9ULV4 474 aaPredicted RBP16.69■□□□□ 0.26
SEMA4D-220ENST00000492386 MAD1L1Q9Y6D9 718 aa16.69■□□□□ 0.26
SEMA4D-220ENST00000492386 PPEF2O14830 753 aa16.69■□□□□ 0.26
SEMA4D-220ENST00000492386 KRT36O76013 467 aa16.69■□□□□ 0.26
SEMA4D-220ENST00000492386 CRHR1P34998 444 aa16.69■□□□□ 0.26
SEMA4D-220ENST00000492386 GRIA1P42261 906 aa16.69■□□□□ 0.26
SEMA4D-220ENST00000492386 RCN1Q15293 331 aa16.69■□□□□ 0.26
SEMA4D-220ENST00000492386 ANO7Q6IWH7 933 aa16.69■□□□□ 0.26
SEMA4D-220ENST00000492386 TREML1Q86YW5 311 aa16.69■□□□□ 0.26
SEMA4D-220ENST00000492386 NUDCD3Q8IVD9 361 aa16.69■□□□□ 0.26
SEMA4D-220ENST00000492386 ARID3BQ8IVW6 561 aaPredicted RBP16.69■□□□□ 0.26
SEMA4D-220ENST00000492386 GPC2Q8N158 579 aa16.69■□□□□ 0.26
SEMA4D-220ENST00000492386 TRIM6Q9C030 488 aaPredicted RBP16.69■□□□□ 0.26
SEMA4D-220ENST00000492386 STOML1Q9UBI4 398 aa16.69■□□□□ 0.26
SEMA4D-220ENST00000492386 HESX1Q9UBX0 185 aa16.69■□□□□ 0.26
SEMA4D-220ENST00000492386 SNNO75324 88 aaPredicted RBP16.68■□□□□ 0.26
SEMA4D-220ENST00000492386 SKAP2O75563 359 aaPredicted RBP16.68■□□□□ 0.26
SEMA4D-220ENST00000492386 ACADSP16219 412 aa16.68■□□□□ 0.26
SEMA4D-220ENST00000492386 PTPN9P43378 593 aa16.68■□□□□ 0.26
SEMA4D-220ENST00000492386 ATXN1P54253 815 aaKnown RBP16.68■□□□□ 0.26
SEMA4D-220ENST00000492386 MROH9Q5TGP6 573 aa16.68■□□□□ 0.26
SEMA4D-220ENST00000492386 NDUFAF2Q8N183 169 aa16.68■□□□□ 0.26
SEMA4D-220ENST00000492386 DNAJC9Q8WXX5 260 aa16.68■□□□□ 0.26
SEMA4D-220ENST00000492386 CLMNQ96JQ2 1002 aa16.68■□□□□ 0.26
SEMA4D-220ENST00000492386 QKIQ96PU8 341 aaKnown RBP eCLIP16.68■□□□□ 0.26
SEMA4D-220ENST00000492386 C20orf27Q9GZN8 174 aa16.68■□□□□ 0.26
SEMA4D-220ENST00000492386 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.68■□□□□ 0.26
SEMA4D-220ENST00000492386 MTMR10Q9NXD2 777 aa16.68■□□□□ 0.26
SEMA4D-220ENST00000492386 PCDHA11Q9Y5I1 949 aa16.68■□□□□ 0.26
SEMA4D-220ENST00000492386 SNX9Q9Y5X1 595 aa16.68■□□□□ 0.26
SEMA4D-220ENST00000492386 A6NHS1 94 aa16.67■□□□□ 0.26
SEMA4D-220ENST00000492386 CDK18Q07002 472 aa16.67■□□□□ 0.26
SEMA4D-220ENST00000492386 KCNT2Q6UVM3 1135 aa16.67■□□□□ 0.26
SEMA4D-220ENST00000492386 CCDC33Q8N5R6 958 aa16.67■□□□□ 0.26
SEMA4D-220ENST00000492386 RAB3IL1Q8TBN0 382 aa16.67■□□□□ 0.26
SEMA4D-220ENST00000492386 MICAL1Q8TDZ2 1067 aa16.67■□□□□ 0.26
SEMA4D-220ENST00000492386 CLEC4CQ8WTT0 213 aa16.67■□□□□ 0.26
SEMA4D-220ENST00000492386 NRG4Q8WWG1 115 aa16.67■□□□□ 0.26
SEMA4D-220ENST00000492386 CENPIQ92674 756 aaPredicted RBP16.67■□□□□ 0.26
SEMA4D-220ENST00000492386 ZNF333Q96JL9 665 aa16.67■□□□□ 0.26
SEMA4D-220ENST00000492386 LPIN3Q9BQK8 851 aa16.67■□□□□ 0.26
SEMA4D-220ENST00000492386 DHX35Q9H5Z1 703 aaKnown RBP16.67■□□□□ 0.26
SEMA4D-220ENST00000492386 NMRK1Q9NWW6 199 aa16.67■□□□□ 0.26
SEMA4D-220ENST00000492386 MOCS1Q9NZB8 636 aa16.67■□□□□ 0.26
SEMA4D-220ENST00000492386 RALGAPA2Q2PPJ7 1873 aa16.67■□□□□ 0.26
SEMA4D-220ENST00000492386 ADM5C9JUS6 153 aa16.67■□□□□ 0.26
SEMA4D-220ENST00000492386 BIRC5O15392 142 aa16.67■□□□□ 0.26
SEMA4D-220ENST00000492386 PSMG1O95456 288 aa16.67■□□□□ 0.26
SEMA4D-220ENST00000492386 BPGMP07738 259 aa16.67■□□□□ 0.26
SEMA4D-220ENST00000492386 GRM5P41594 1212 aa16.67■□□□□ 0.26
SEMA4D-220ENST00000492386 SEMA5AQ13591 1074 aa16.67■□□□□ 0.26
SEMA4D-220ENST00000492386 ZDHHC17Q8IUH5 632 aa16.67■□□□□ 0.26
SEMA4D-220ENST00000492386 ADGRF2Q8IZF7 708 aa16.67■□□□□ 0.26
SEMA4D-220ENST00000492386 FBXO27Q8NI29 283 aa16.67■□□□□ 0.26
SEMA4D-220ENST00000492386 NLRP7Q8WX94 980 aa16.67■□□□□ 0.26
SEMA4D-220ENST00000492386 OSBPL1AQ9BXW6 950 aa16.67■□□□□ 0.26
SEMA4D-220ENST00000492386 XAB2Q9HCS7 855 aaKnown RBP16.67■□□□□ 0.26
SEMA4D-220ENST00000492386 GTF2IRD1Q9UHL9 959 aa16.67■□□□□ 0.26
SEMA4D-220ENST00000492386 NVLO15381 856 aaKnown RBP16.66■□□□□ 0.26
SEMA4D-220ENST00000492386 TOP3BO95985 862 aaKnown RBP16.66■□□□□ 0.26
SEMA4D-220ENST00000492386 VHLP40337 213 aa16.66■□□□□ 0.26
SEMA4D-220ENST00000492386 CPA2P48052 419 aa16.66■□□□□ 0.26
SEMA4D-220ENST00000492386 NR2C2P49116 596 aa16.66■□□□□ 0.26
SEMA4D-220ENST00000492386 SERPINB9P50453 376 aa16.66■□□□□ 0.26
SEMA4D-220ENST00000492386 AQP5P55064 265 aa16.66■□□□□ 0.26
SEMA4D-220ENST00000492386 SESN3P58005 492 aa16.66■□□□□ 0.26
SEMA4D-220ENST00000492386 TSNAXIP1Q2TAA8 658 aa16.66■□□□□ 0.26
SEMA4D-220ENST00000492386 NBPF20Q3BBV1 942 aa16.66■□□□□ 0.26
SEMA4D-220ENST00000492386 CAPRIN2Q6IMN6 1127 aaKnown RBP16.66■□□□□ 0.26
SEMA4D-220ENST00000492386 MTHFD1LQ6UB35 978 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms