RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 NR2F6P10588 404 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 ATP1A3P13637 1013 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 NDUFB7P17568 137 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 ATF3P18847 181 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 CALML3P27482 149 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 PBX1P40424 430 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 MAGEA9P43362 315 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 ALDH9A1P49189 494 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 CLK3P49761 638 aaKnown RBP2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 GNAQP50148 359 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 ATXN1P54253 815 aaKnown RBP2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 CACNA2D1P54289 1103 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 HAND2P61296 217 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 ITIH3Q06033 890 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 PPP3CAQ08209 521 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 GRM1Q13255 1194 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 KLF1Q13351 362 aaPredicted RBP2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 PNOCQ13519 176 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 STIM1Q13586 685 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 TRIM14Q14142 442 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 WTAPQ15007 396 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 SEPT2Q15019 361 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 ELF2Q15723 593 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 PABPC1LQ4VXU2 614 aaKnown RBP2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 GLE1Q53GS7 698 aaKnown RBP2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 DNAJC21Q5F1R6 531 aaKnown RBP2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 ZNF569Q5MCW4 686 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 RNF187Q5TA31 235 aaPredicted RBP2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 ZNF658Q5TYW1 1059 aaPredicted RBP2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 PAPD7Q5XG87 772 aaKnown RBP2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 ALS2CLQ60I27 953 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 APOA5Q6Q788 366 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 PCSK4Q6UW60 755 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 LAYNQ6UX15 382 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 LHFPL2Q6ZUX7 228 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 B4GALNT4Q76KP1 1039 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 CYB5R4Q7L1T6 521 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 KCNK18Q7Z418 384 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 AMIGO2Q86SJ2 522 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 CTAGE6Q86UF2 777 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 IQCA1Q86XH1 822 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 RASAL3Q86YV0 1011 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 TMEM139Q8IV31 216 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 CTAGE4Q8IX94 777 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 SH2D3CQ8N5H7 860 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 RNF10Q8N5U6 811 aaKnown RBP2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 CNTD1Q8N815 330 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 PCSK9Q8NBP7 692 aaKnown RBP2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 C1orf131Q8NDD1 294 aaKnown RBP2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 FAM71BQ8TC56 605 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 NOC3LQ8WTT2 800 aaKnown RBP2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 CCDC12Q8WUD4 166 aaPredicted RBP2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 CASKIN2Q8WXE0 1202 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 LPIN2Q92539 896 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 ANKS1AQ92625 1134 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 ESR2Q92731 530 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 CCDC47Q96A33 483 aaKnown RBP2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 NACC2Q96BF6 587 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 MTMR8Q96EF0 704 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 NAF1Q96HR8 494 aaKnown RBP2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 BBC3Q96PG8 261 aaPredicted RBP2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 TRIB1Q96RU8 372 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 VRK1Q99986 396 aaPredicted RBP2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 LRFN3Q9BTN0 628 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 SLC26A6Q9BXS9 759 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 RNF26Q9BY78 433 aaPredicted RBP2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 PUS3Q9BZE2 481 aaKnown RBP2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 CCSER1Q9C0I3 900 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 LRRC27Q9C0I9 530 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 NAPBQ9H115 298 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 R3HDMLQ9H3Y0 253 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 BRD9Q9H8M2 597 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 LY9Q9HBG7 655 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 SPC25Q9HBM1 224 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 SH3GLB2Q9NR46 395 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 CNNM1Q9NRU3 951 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 SAMSN1Q9NSI8 373 aaKnown RBP2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 RBM28Q9NW13 759 aaKnown RBP2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 ZNHIT6Q9NWK9 470 aaKnown RBP2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 KCTD5Q9NXV2 234 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 RAI14Q9P0K7 980 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 RNF7Q9UBF6 113 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 SLC23A1Q9UHI7 598 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 RWDD2AQ9UIY3 292 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 FBXO2Q9UK22 296 aaPredicted RBP2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 PADI4Q9UM07 663 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 CAPN11Q9UMQ6 739 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 SIK3Q9Y2K2 1263 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 LUC7L2Q9Y383 392 aaKnown RBP2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 NFE2L3Q9Y4A8 694 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 SAR1BQ9Y6B6 198 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 ARHGAP23Q9P227 1491 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 PIK3C2AO00443 1686 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 RIMS1Q86UR5 1692 aaKnown RBP2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 TOPAZ1Q8N9V7 1692 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 MYO5AQ9Y4I1 1855 aaKnown RBP2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 ZNF609O15014 1411 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 PHRF1Q9P1Y6 1649 aaKnown RBP2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 NWD1Q149M9 1564 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms