RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 EFEMP1Q12805 493 aa19.42■□□□□ 0.7
MCF2L-230ENST00000491028 TEAD2Q15562 447 aa19.42■□□□□ 0.7
MCF2L-230ENST00000491028 C15orf59Q2T9L4 293 aaPredicted RBP19.42■□□□□ 0.7
MCF2L-230ENST00000491028 GPR158Q5T848 1215 aa19.42■□□□□ 0.7
MCF2L-230ENST00000491028 TXNDC8Q6A555 127 aa19.42■□□□□ 0.7
MCF2L-230ENST00000491028 DAAM2Q86T65 1068 aa19.42■□□□□ 0.7
MCF2L-230ENST00000491028 LRRC57Q8N9N7 239 aa19.42■□□□□ 0.7
MCF2L-230ENST00000491028 FAM172AQ8WUF8 416 aa19.42■□□□□ 0.7
MCF2L-230ENST00000491028 UBE2Q2Q8WVN8 375 aa19.42■□□□□ 0.7
MCF2L-230ENST00000491028 NECTIN4Q96NY8 510 aa19.42■□□□□ 0.7
MCF2L-230ENST00000491028 UBE2ZQ9H832 354 aaPredicted RBP19.42■□□□□ 0.7
MCF2L-230ENST00000491028 DDIT4Q9NX09 232 aa19.42■□□□□ 0.7
MCF2L-230ENST00000491028 MARCH2Q9P0N8 246 aa19.42■□□□□ 0.7
MCF2L-230ENST00000491028 RASAL2Q9UJF2 1139 aa19.42■□□□□ 0.7
MCF2L-230ENST00000491028 NUDT5Q9UKK9 219 aa19.42■□□□□ 0.7
MCF2L-230ENST00000491028 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.41■□□□□ 0.7
MCF2L-230ENST00000491028 GRID2IPA4D2P6 1211 aa19.41■□□□□ 0.7
MCF2L-230ENST00000491028 TMEM110-MUSTN1A8MSY1 372 aa19.41■□□□□ 0.7
MCF2L-230ENST00000491028 KIF5CO60282 957 aa19.41■□□□□ 0.7
MCF2L-230ENST00000491028 PALMO75781 387 aa19.41■□□□□ 0.7
MCF2L-230ENST00000491028 CEBPBP17676 345 aa19.41■□□□□ 0.7
MCF2L-230ENST00000491028 MSNP26038 577 aaKnown RBP19.41■□□□□ 0.7
MCF2L-230ENST00000491028 PCK1P35558 622 aa19.41■□□□□ 0.7
MCF2L-230ENST00000491028 PITX1P78337 314 aaPredicted RBP19.41■□□□□ 0.7
MCF2L-230ENST00000491028 EIF4EBP2Q13542 120 aaPredicted RBP19.41■□□□□ 0.7
MCF2L-230ENST00000491028 CCDC85BQ15834 202 aaPredicted RBP19.41■□□□□ 0.7
MCF2L-230ENST00000491028 CDO1Q16878 200 aa19.41■□□□□ 0.7
MCF2L-230ENST00000491028 SND1Q7KZF4 910 aaKnown RBP eCLIP19.41■□□□□ 0.7
MCF2L-230ENST00000491028 SLFN11Q7Z7L1 901 aa19.41■□□□□ 0.7
MCF2L-230ENST00000491028 SFMBT1Q9UHJ3 866 aa19.41■□□□□ 0.7
MCF2L-230ENST00000491028 HBS1LQ9Y450 684 aaKnown RBP19.41■□□□□ 0.7
MCF2L-230ENST00000491028 NRG2O14511 850 aaPredicted RBP19.4■□□□□ 0.7
MCF2L-230ENST00000491028 LRCH4O75427 683 aa19.4■□□□□ 0.7
MCF2L-230ENST00000491028 TBX18O95935 607 aa19.4■□□□□ 0.7
MCF2L-230ENST00000491028 CKMP06732 381 aa19.4■□□□□ 0.7
MCF2L-230ENST00000491028 HDCP19113 662 aa19.4■□□□□ 0.7
MCF2L-230ENST00000491028 TFE3P19532 575 aaPredicted RBP19.4■□□□□ 0.7
MCF2L-230ENST00000491028 HDAC4P56524 1084 aa19.4■□□□□ 0.7
MCF2L-230ENST00000491028 SLC7A9P82251 487 aa19.4■□□□□ 0.7
MCF2L-230ENST00000491028 SKIV2LQ15477 1246 aaKnown RBP19.4■□□□□ 0.7
MCF2L-230ENST00000491028 TRIP4Q15650 581 aaPredicted RBP19.4■□□□□ 0.7
MCF2L-230ENST00000491028 STXBP5Q5T5C0 1151 aa19.4■□□□□ 0.7
MCF2L-230ENST00000491028 C17orf53Q8N3J3 647 aaPredicted RBP19.4■□□□□ 0.7
MCF2L-230ENST00000491028 ARL14EPQ8N8R7 260 aaPredicted RBP19.4■□□□□ 0.7
MCF2L-230ENST00000491028 MAB21L3Q8N8X9 362 aa19.4■□□□□ 0.7
MCF2L-230ENST00000491028 ITFG1Q8TB96 612 aa19.4■□□□□ 0.7
MCF2L-230ENST00000491028 ADAM32Q8TC27 787 aa19.4■□□□□ 0.7
MCF2L-230ENST00000491028 SLC46A2Q9BY10 475 aa19.4■□□□□ 0.7
MCF2L-230ENST00000491028 ADAM33Q9BZ11 813 aa19.4■□□□□ 0.7
MCF2L-230ENST00000491028 RNF38Q9H0F5 515 aa19.4■□□□□ 0.7
MCF2L-230ENST00000491028 SLITRK6Q9H5Y7 841 aa19.4■□□□□ 0.7
MCF2L-230ENST00000491028 TLR6Q9Y2C9 796 aa19.4■□□□□ 0.7
MCF2L-230ENST00000491028 ALG6Q9Y672 507 aa19.4■□□□□ 0.7
MCF2L-230ENST00000491028 SZT2Q5T011 3432 aa19.39■□□□□ 0.7
MCF2L-230ENST00000491028 SLC12A8A0AV02 714 aa19.39■□□□□ 0.69
MCF2L-230ENST00000491028 MDM4O15151 490 aa19.39■□□□□ 0.69
MCF2L-230ENST00000491028 MBL2P11226 248 aaPredicted RBP19.39■□□□□ 0.69
MCF2L-230ENST00000491028 WEE1P30291 646 aa19.39■□□□□ 0.69
MCF2L-230ENST00000491028 AVPR1AP37288 418 aa19.39■□□□□ 0.69
MCF2L-230ENST00000491028 TBX4P57082 545 aa19.39■□□□□ 0.69
MCF2L-230ENST00000491028 COG7P83436 770 aa19.39■□□□□ 0.69
MCF2L-230ENST00000491028 RING1Q06587 406 aa19.39■□□□□ 0.69
MCF2L-230ENST00000491028 NME3Q13232 169 aa19.39■□□□□ 0.69
MCF2L-230ENST00000491028 BRMS1LQ5PSV4 323 aa19.39■□□□□ 0.69
MCF2L-230ENST00000491028 SH3PXD2AQ5TCZ1 1133 aa19.39■□□□□ 0.69
MCF2L-230ENST00000491028 CC2D1AQ6P1N0 951 aaPredicted RBP19.39■□□□□ 0.69
MCF2L-230ENST00000491028 MIB1Q86YT6 1006 aa19.39■□□□□ 0.69
MCF2L-230ENST00000491028 NPAS3Q8IXF0 933 aa19.39■□□□□ 0.69
MCF2L-230ENST00000491028 CMTM8Q8IZV2 173 aa19.39■□□□□ 0.69
MCF2L-230ENST00000491028 SUSD6Q92537 303 aa19.39■□□□□ 0.69
MCF2L-230ENST00000491028 PLD4Q96BZ4 506 aa19.39■□□□□ 0.69
MCF2L-230ENST00000491028 PIGVQ9NUD9 493 aa19.39■□□□□ 0.69
MCF2L-230ENST00000491028 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.39■□□□□ 0.69
MCF2L-230ENST00000491028 GDE1Q9NZC3 331 aa19.39■□□□□ 0.69
MCF2L-230ENST00000491028 CALCOCO1Q9P1Z2 691 aa19.39■□□□□ 0.69
MCF2L-230ENST00000491028 USTQ9Y2C2 406 aa19.39■□□□□ 0.69
MCF2L-230ENST00000491028 REV3LO60673 3130 aa19.38■□□□□ 0.69
MCF2L-230ENST00000491028 MSI1O43347 362 aaKnown RBP19.38■□□□□ 0.69
MCF2L-230ENST00000491028 SPOPO43791 374 aa19.38■□□□□ 0.69
MCF2L-230ENST00000491028 IGLV3-27P01718 113 aa19.38■□□□□ 0.69
MCF2L-230ENST00000491028 SLC2A3P11169 496 aa19.38■□□□□ 0.69
MCF2L-230ENST00000491028 COMTP21964 271 aa19.38■□□□□ 0.69
MCF2L-230ENST00000491028 CXCR3P49682 368 aa19.38■□□□□ 0.69
MCF2L-230ENST00000491028 AIF1P55008 147 aa19.38■□□□□ 0.69
MCF2L-230ENST00000491028 MTA1Q13330 715 aa19.38■□□□□ 0.69
MCF2L-230ENST00000491028 SMAD4Q13485 552 aaKnown RBP19.38■□□□□ 0.69
MCF2L-230ENST00000491028 PPP2R5DQ14738 602 aa19.38■□□□□ 0.69
MCF2L-230ENST00000491028 CBX2Q14781 532 aaPredicted RBP19.38■□□□□ 0.69
MCF2L-230ENST00000491028 CLUL1Q15846 466 aa19.38■□□□□ 0.69
MCF2L-230ENST00000491028 HADHQ16836 314 aaKnown RBP19.38■□□□□ 0.69
MCF2L-230ENST00000491028 GET4Q7L5D6 327 aaPredicted RBP19.38■□□□□ 0.69
MCF2L-230ENST00000491028 DDX42Q86XP3 938 aaKnown RBP eCLIP19.38■□□□□ 0.69
MCF2L-230ENST00000491028 ARFGAP1Q8N6T3 406 aa19.38■□□□□ 0.69
MCF2L-230ENST00000491028 ING5Q8WYH8 240 aa19.38■□□□□ 0.69
MCF2L-230ENST00000491028 HLA-CQ95604 372 aa19.38■□□□□ 0.69
MCF2L-230ENST00000491028 SLC39A13Q96H72 371 aa19.38■□□□□ 0.69
MCF2L-230ENST00000491028 SLC22A12Q96S37 553 aa19.38■□□□□ 0.69
MCF2L-230ENST00000491028 KLF16Q9BXK1 252 aaPredicted RBP19.38■□□□□ 0.69
MCF2L-230ENST00000491028 IRX2Q9BZI1 471 aaPredicted RBP19.38■□□□□ 0.69
MCF2L-230ENST00000491028 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.38■□□□□ 0.693e-6■■■□□ 17.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms