RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 UBXN6Q9BZV1 441 aa20.7■□□□□ 0.9
SREBF1-216ENST00000490796 CALCOCO1Q9P1Z2 691 aa20.7■□□□□ 0.9
SREBF1-216ENST00000490796 HESX1Q9UBX0 185 aa20.7■□□□□ 0.9
SREBF1-216ENST00000490796 SLC16A3O15427 465 aaKnown RBP20.69■□□□□ 0.9
SREBF1-216ENST00000490796 CFIP05156 583 aa20.69■□□□□ 0.9
SREBF1-216ENST00000490796 PMLP29590 882 aa20.69■□□□□ 0.9
SREBF1-216ENST00000490796 CORO1AP31146 461 aaKnown RBP20.69■□□□□ 0.9
SREBF1-216ENST00000490796 PRCPP42785 496 aa20.69■□□□□ 0.9
SREBF1-216ENST00000490796 YWHAGP61981 247 aaKnown RBP eCLIP20.69■□□□□ 0.9
SREBF1-216ENST00000490796 FKBP3Q00688 224 aaKnown RBP20.69■□□□□ 0.9
SREBF1-216ENST00000490796 STARD3Q14849 445 aa20.69■□□□□ 0.9
SREBF1-216ENST00000490796 ST3GAL2Q16842 350 aa20.69■□□□□ 0.9
SREBF1-216ENST00000490796 ARHGAP17Q68EM7 881 aa20.69■□□□□ 0.9
SREBF1-216ENST00000490796 ANKRD52Q8NB46 1076 aa20.69■□□□□ 0.9
SREBF1-216ENST00000490796 UCMAQ8WVF2 138 aa20.69■□□□□ 0.9
SREBF1-216ENST00000490796 TATDN2Q93075 761 aa20.69■□□□□ 0.9
SREBF1-216ENST00000490796 SMARCE1Q969G3 411 aa20.69■□□□□ 0.9
SREBF1-216ENST00000490796 ERLEC1Q96DZ1 483 aa20.69■□□□□ 0.9
SREBF1-216ENST00000490796 ACOX2Q99424 681 aa20.69■□□□□ 0.9
SREBF1-216ENST00000490796 ARID3AQ99856 593 aa20.69■□□□□ 0.9
SREBF1-216ENST00000490796 LRRC4Q9HBW1 653 aa20.69■□□□□ 0.9
SREBF1-216ENST00000490796 MARCH2Q9P0N8 246 aa20.69■□□□□ 0.9
SREBF1-216ENST00000490796 CEP295Q9C0D2 2601 aa20.68■□□□□ 0.9
SREBF1-216ENST00000490796 A0A1W2PQF6 199 aa20.68■□□□□ 0.9
SREBF1-216ENST00000490796 PRRT4C9JH25 899 aa20.68■□□□□ 0.9
SREBF1-216ENST00000490796 CD19P15391 556 aa20.68■□□□□ 0.9
SREBF1-216ENST00000490796 HOXD12P35452 270 aa20.68■□□□□ 0.9
SREBF1-216ENST00000490796 MAPK8P45983 427 aa20.68■□□□□ 0.9
SREBF1-216ENST00000490796 TKTL1P51854 596 aa20.68■□□□□ 0.9
SREBF1-216ENST00000490796 STIM1Q13586 685 aa20.68■□□□□ 0.9
SREBF1-216ENST00000490796 BECN1Q14457 450 aa20.68■□□□□ 0.9
SREBF1-216ENST00000490796 E2F5Q15329 346 aa20.68■□□□□ 0.9
SREBF1-216ENST00000490796 GOLGA7BQ2TAP0 167 aa20.68■□□□□ 0.9
SREBF1-216ENST00000490796 SGO2Q562F6 1265 aa20.68■□□□□ 0.9
SREBF1-216ENST00000490796 SH3PXD2AQ5TCZ1 1133 aa20.68■□□□□ 0.9
SREBF1-216ENST00000490796 RABEPKQ7Z6M1 372 aa20.68■□□□□ 0.9
SREBF1-216ENST00000490796 DEFB119Q8N690 84 aa20.68■□□□□ 0.9
SREBF1-216ENST00000490796 CEP76Q8TAP6 659 aa20.68■□□□□ 0.9
SREBF1-216ENST00000490796 CACNA2D2Q9NY47 1150 aa20.68■□□□□ 0.9
SREBF1-216ENST00000490796 ARMCX3Q9UH62 379 aaPredicted RBP20.68■□□□□ 0.9
SREBF1-216ENST00000490796 CYP8B1Q9UNU6 501 aa20.68■□□□□ 0.9
SREBF1-216ENST00000490796 ATXN2Q99700 1313 aaKnown RBP20.68■□□□□ 0.9
SREBF1-216ENST00000490796 SLC12A8A0AV02 714 aa20.67■□□□□ 0.9
SREBF1-216ENST00000490796 GFRA2O00451 464 aa20.67■□□□□ 0.9
SREBF1-216ENST00000490796 NDUFS2O75306 463 aa20.67■□□□□ 0.9
SREBF1-216ENST00000490796 ZBED1O96006 694 aa20.67■□□□□ 0.9
SREBF1-216ENST00000490796 CISD3P0C7P0 127 aa20.67■□□□□ 0.9
SREBF1-216ENST00000490796 NDUFV2P19404 249 aa20.67■□□□□ 0.9
SREBF1-216ENST00000490796 ITPKAP23677 461 aa20.67■□□□□ 0.9
SREBF1-216ENST00000490796 MCCD1P59942 119 aaPredicted RBP20.67■□□□□ 0.9
SREBF1-216ENST00000490796 CUL2Q13617 745 aa20.67■□□□□ 0.9
SREBF1-216ENST00000490796 DUOXA1Q1HG43 343 aa20.67■□□□□ 0.9
SREBF1-216ENST00000490796 CBWD6Q4V339 395 aa20.67■□□□□ 0.9
SREBF1-216ENST00000490796 CBWD3Q5JTY5 395 aa20.67■□□□□ 0.9
SREBF1-216ENST00000490796 CBWD5Q5RIA9 395 aa20.67■□□□□ 0.9
SREBF1-216ENST00000490796 KIAA1324Q6UXG2 1013 aaKnown RBP20.67■□□□□ 0.9
SREBF1-216ENST00000490796 DENND1CQ8IV53 801 aa20.67■□□□□ 0.9
SREBF1-216ENST00000490796 FMR1NBQ8N0W7 255 aaPredicted RBP20.67■□□□□ 0.9
SREBF1-216ENST00000490796 RNF139Q8WU17 664 aa20.67■□□□□ 0.9
SREBF1-216ENST00000490796 IPO9Q96P70 1041 aaKnown RBP20.67■□□□□ 0.9
SREBF1-216ENST00000490796 GABRG3Q99928 467 aa20.67■□□□□ 0.9
SREBF1-216ENST00000490796 HCN2Q9UL51 889 aa20.67■□□□□ 0.9
SREBF1-216ENST00000490796 RAD54BQ9Y620 910 aa20.67■□□□□ 0.9
SREBF1-216ENST00000490796 LAMA1P25391 3075 aa20.67■□□□□ 0.9
SREBF1-216ENST00000490796 PI4KAP42356 2102 aa20.66■□□□□ 0.9
SREBF1-216ENST00000490796 CDX4O14627 284 aaPredicted RBP20.66■□□□□ 0.9
SREBF1-216ENST00000490796 KLKB1P03952 638 aa20.66■□□□□ 0.9
SREBF1-216ENST00000490796 ENGP17813 658 aa20.66■□□□□ 0.9
SREBF1-216ENST00000490796 BCAT1P54687 386 aa20.66■□□□□ 0.9
SREBF1-216ENST00000490796 LRRC63Q05C16 580 aa20.66■□□□□ 0.9
SREBF1-216ENST00000490796 GFPT1Q06210 699 aaPredicted RBP20.66■□□□□ 0.9
SREBF1-216ENST00000490796 ZNF33AQ06730 810 aa20.66■□□□□ 0.9
SREBF1-216ENST00000490796 ZNF252P-AS1Q0IIN9 211 aa20.66■□□□□ 0.9
SREBF1-216ENST00000490796 LRMPQ12912 555 aa20.66■□□□□ 0.9
SREBF1-216ENST00000490796 RAB41Q5JT25 222 aa20.66■□□□□ 0.9
SREBF1-216ENST00000490796 ANKRD40Q6AI12 368 aa20.66■□□□□ 0.9
SREBF1-216ENST00000490796 KIAA1211LQ6NV74 962 aa20.66■□□□□ 0.9
SREBF1-216ENST00000490796 SIX6OS1Q8N1H7 587 aa20.66■□□□□ 0.9
SREBF1-216ENST00000490796 DDI1Q8WTU0 396 aa20.66■□□□□ 0.9
SREBF1-216ENST00000490796 ULBP1Q9BZM6 244 aa20.66■□□□□ 0.9
SREBF1-216ENST00000490796 SLC32A1Q9H598 525 aa20.66■□□□□ 0.9
SREBF1-216ENST00000490796 OLA1Q9NTK5 396 aaKnown RBP20.66■□□□□ 0.9
SREBF1-216ENST00000490796 TMEM74BQ9NUR3 256 aa20.66■□□□□ 0.9
SREBF1-216ENST00000490796 PILRBQ9UKJ0 227 aa20.66■□□□□ 0.9
SREBF1-216ENST00000490796 TSPAN16Q9UKR8 245 aa20.66■□□□□ 0.9
SREBF1-216ENST00000490796 AGO1Q9UL18 857 aaKnown RBP20.66■□□□□ 0.9
SREBF1-216ENST00000490796 SLC6A14Q9UN76 642 aa20.66■□□□□ 0.9
SREBF1-216ENST00000490796 SLC27A6Q9Y2P4 619 aa20.66■□□□□ 0.9
SREBF1-216ENST00000490796 IGHV1OR15-9A0A0B4J2B8 117 aa20.65■□□□□ 0.9
SREBF1-216ENST00000490796 PSMA7O14818 248 aa20.65■□□□□ 0.9
SREBF1-216ENST00000490796 GIPC1O14908 333 aa20.65■□□□□ 0.9
SREBF1-216ENST00000490796 XPO1O14980 1071 aaKnown RBP20.65■□□□□ 0.9
SREBF1-216ENST00000490796 NPC1O15118 1278 aa20.65■□□□□ 0.9
SREBF1-216ENST00000490796 PENKP01210 267 aaPredicted RBP20.65■□□□□ 0.9
SREBF1-216ENST00000490796 CEACAM1P13688 526 aa20.65■□□□□ 0.9
SREBF1-216ENST00000490796 CSRP1P21291 193 aaKnown RBP20.65■□□□□ 0.9
SREBF1-216ENST00000490796 TBXAS1P24557 533 aaPredicted RBP20.65■□□□□ 0.9
SREBF1-216ENST00000490796 HARS2P49590 506 aaKnown RBP20.65■□□□□ 0.9
SREBF1-216ENST00000490796 SHC2P98077 582 aa20.65■□□□□ 0.9
SREBF1-216ENST00000490796 ARID5AQ03989 594 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms