RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 NAALADL1Q9UQQ1 740 aa11.42□□□□□ -0.58
VARS2-210ENST00000490699 USTQ9Y2C2 406 aa11.42□□□□□ -0.58
VARS2-210ENST00000490699 HBS1LQ9Y450 684 aaKnown RBP11.42□□□□□ -0.58
VARS2-210ENST00000490699 ZFP37Q9Y6Q3 630 aaPredicted RBP11.42□□□□□ -0.58
VARS2-210ENST00000490699 CHD7Q9P2D1 2997 aa11.41□□□□□ -0.58
VARS2-210ENST00000490699 SLC12A8A0AV02 714 aa11.41□□□□□ -0.58
VARS2-210ENST00000490699 PROSCO94903 275 aa11.41□□□□□ -0.58
VARS2-210ENST00000490699 MOCS3O95396 460 aa11.41□□□□□ -0.58
VARS2-210ENST00000490699 PAPLNO95428 1278 aa11.41□□□□□ -0.58
VARS2-210ENST00000490699 TRUB2O95900 331 aaKnown RBP11.41□□□□□ -0.58
VARS2-210ENST00000490699 CCR1P32246 355 aa11.41□□□□□ -0.58
VARS2-210ENST00000490699 GBP2P32456 591 aaPredicted RBP11.41□□□□□ -0.58
VARS2-210ENST00000490699 CETN2P41208 172 aa11.41□□□□□ -0.58
VARS2-210ENST00000490699 HARS2P49590 506 aaKnown RBP11.41□□□□□ -0.58
VARS2-210ENST00000490699 TBX4P57082 545 aa11.41□□□□□ -0.58
VARS2-210ENST00000490699 SMAD4Q13485 552 aaKnown RBP11.41□□□□□ -0.58
VARS2-210ENST00000490699 COL19A1Q14993 1142 aa11.41□□□□□ -0.58
VARS2-210ENST00000490699 TAF5Q15542 800 aa11.41□□□□□ -0.58
VARS2-210ENST00000490699 TEAD2Q15562 447 aa11.41□□□□□ -0.58
VARS2-210ENST00000490699 PUS10Q3MIT2 529 aaKnown RBP11.41□□□□□ -0.58
VARS2-210ENST00000490699 ACBD5Q5T8D3 534 aaPredicted RBP11.41□□□□□ -0.58
VARS2-210ENST00000490699 NUGGCQ68CJ6 796 aa11.41□□□□□ -0.58
VARS2-210ENST00000490699 SCYL2Q6P3W7 929 aa11.41□□□□□ -0.58
VARS2-210ENST00000490699 SYCE2Q6PIF2 218 aa11.41□□□□□ -0.58
VARS2-210ENST00000490699 HFE2Q6ZVN8 426 aa11.41□□□□□ -0.58
VARS2-210ENST00000490699 GAREM2Q75VX8 874 aa11.41□□□□□ -0.58
VARS2-210ENST00000490699 PEX26Q7Z412 305 aa11.41□□□□□ -0.58
VARS2-210ENST00000490699 ZSCAN30Q86W11 494 aa11.41□□□□□ -0.58
VARS2-210ENST00000490699 UNC45BQ8IWX7 931 aa11.41□□□□□ -0.58
VARS2-210ENST00000490699 UBL4BQ8N7F7 174 aa11.41□□□□□ -0.58
VARS2-210ENST00000490699 NIPA2Q8N8Q9 360 aa11.41□□□□□ -0.58
VARS2-210ENST00000490699 SHKBP1Q8TBC3 707 aa11.41□□□□□ -0.58
VARS2-210ENST00000490699 DQX1Q8TE96 717 aaKnown RBP11.41□□□□□ -0.58
VARS2-210ENST00000490699 FAM172AQ8WUF8 416 aa11.41□□□□□ -0.58
VARS2-210ENST00000490699 PLD4Q96BZ4 506 aa11.41□□□□□ -0.58
VARS2-210ENST00000490699 ACSF2Q96CM8 615 aaPredicted RBP11.41□□□□□ -0.58
VARS2-210ENST00000490699 PIWIL1Q96J94 861 aaKnown RBP11.41□□□□□ -0.58
VARS2-210ENST00000490699 CFAP57Q96MR6 1250 aa11.41□□□□□ -0.58
VARS2-210ENST00000490699 DDX50Q9BQ39 737 aaKnown RBP11.41□□□□□ -0.58
VARS2-210ENST00000490699 DCLK3Q9C098 648 aa11.41□□□□□ -0.58
VARS2-210ENST00000490699 CCSER2Q9H7U1 834 aa11.41□□□□□ -0.58
VARS2-210ENST00000490699 KIF9Q9HAQ2 790 aa11.41□□□□□ -0.58
VARS2-210ENST00000490699 IL21Q9HBE4 155 aa11.41□□□□□ -0.58
VARS2-210ENST00000490699 OSGEPQ9NPF4 335 aa11.41□□□□□ -0.58
VARS2-210ENST00000490699 GDE1Q9NZC3 331 aa11.41□□□□□ -0.58
VARS2-210ENST00000490699 CLEC1BQ9P126 229 aa11.41□□□□□ -0.58
VARS2-210ENST00000490699 TLR6Q9Y2C9 796 aa11.41□□□□□ -0.58
VARS2-210ENST00000490699 SH3BP1Q9Y3L3 701 aa11.41□□□□□ -0.58
VARS2-210ENST00000490699 PRRC2BQ5JSZ5 2229 aaKnown RBP11.41□□□□□ -0.58
VARS2-210ENST00000490699 TRANK1O15050 2925 aa11.41□□□□□ -0.58
VARS2-210ENST00000490699 TCRBV5S1A1TA0A578 114 aa11.4□□□□□ -0.58
VARS2-210ENST00000490699 RCCD1A6NED2 376 aa11.4□□□□□ -0.58
VARS2-210ENST00000490699 KIF2AO00139 706 aaPredicted RBP11.4□□□□□ -0.58
VARS2-210ENST00000490699 COCHO43405 550 aa11.4□□□□□ -0.58
VARS2-210ENST00000490699 GJB6O95452 261 aa11.4□□□□□ -0.58
VARS2-210ENST00000490699 OAS1P00973 400 aaKnown RBP11.4□□□□□ -0.58
VARS2-210ENST00000490699 KRT7P08729 469 aa11.4□□□□□ -0.58
VARS2-210ENST00000490699 PCK1P35558 622 aa11.4□□□□□ -0.58
VARS2-210ENST00000490699 AIF1P55008 147 aa11.4□□□□□ -0.58
VARS2-210ENST00000490699 NTHL1P78549 312 aa11.4□□□□□ -0.58
VARS2-210ENST00000490699 CBX2Q14781 532 aaPredicted RBP11.4□□□□□ -0.58
VARS2-210ENST00000490699 TRIP4Q15650 581 aaPredicted RBP11.4□□□□□ -0.58
VARS2-210ENST00000490699 CLUL1Q15846 466 aa11.4□□□□□ -0.58
VARS2-210ENST00000490699 AAK1Q2M2I8 961 aa11.4□□□□□ -0.58
VARS2-210ENST00000490699 PRSS36Q5K4E3 855 aa11.4□□□□□ -0.58
VARS2-210ENST00000490699 BRMS1LQ5PSV4 323 aa11.4□□□□□ -0.58
VARS2-210ENST00000490699 SYPL2Q5VXT5 272 aa11.4□□□□□ -0.58
VARS2-210ENST00000490699 TXNDC8Q6A555 127 aa11.4□□□□□ -0.58
VARS2-210ENST00000490699 OTOP3Q7RTS5 596 aa11.4□□□□□ -0.58
VARS2-210ENST00000490699 BHLHA9Q7RTU4 235 aa11.4□□□□□ -0.58
VARS2-210ENST00000490699 TAC4Q86UU9 113 aa11.4□□□□□ -0.58
VARS2-210ENST00000490699 CMTM8Q8IZV2 173 aa11.4□□□□□ -0.58
VARS2-210ENST00000490699 ATP6V0D2Q8N8Y2 350 aa11.4□□□□□ -0.58
VARS2-210ENST00000490699 SMRP1Q8NCR6 262 aa11.4□□□□□ -0.58
VARS2-210ENST00000490699 TTC16Q8NEE8 873 aa11.4□□□□□ -0.58
VARS2-210ENST00000490699 MAFAQ8NHW3 353 aaPredicted RBP11.4□□□□□ -0.58
VARS2-210ENST00000490699 TPCN2Q8NHX9 752 aa11.4□□□□□ -0.58
VARS2-210ENST00000490699 ING5Q8WYH8 240 aa11.4□□□□□ -0.58
VARS2-210ENST00000490699 E2F7Q96AV8 911 aa11.4□□□□□ -0.58
VARS2-210ENST00000490699 PGAP3Q96FM1 320 aaPredicted RBP11.4□□□□□ -0.58
VARS2-210ENST00000490699 MSLNLQ96KJ4 702 aa11.4□□□□□ -0.58
VARS2-210ENST00000490699 TBCBQ99426 244 aa11.4□□□□□ -0.58
VARS2-210ENST00000490699 NPY6RQ99463 290 aa11.4□□□□□ -0.58
VARS2-210ENST00000490699 LRRC3Q9BY71 257 aa11.4□□□□□ -0.58
VARS2-210ENST00000490699 WDCPQ9H6R7 721 aa11.4□□□□□ -0.58
VARS2-210ENST00000490699 KCND1Q9NSA2 647 aa11.4□□□□□ -0.58
VARS2-210ENST00000490699 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.4□□□□□ -0.58
VARS2-210ENST00000490699 AMFRQ9UKV5 643 aa11.4□□□□□ -0.58
VARS2-210ENST00000490699 TFR2Q9UP52 801 aa11.4□□□□□ -0.58
VARS2-210ENST00000490699 NR2E1Q9Y466 385 aa11.4□□□□□ -0.58
VARS2-210ENST00000490699 TYW5A2RUC4 315 aaKnown RBP11.39□□□□□ -0.59
VARS2-210ENST00000490699 C2orf78A6NCI8 922 aa11.39□□□□□ -0.59
VARS2-210ENST00000490699 MIF4GDA9UHW6 222 aaKnown RBP11.39□□□□□ -0.59
VARS2-210ENST00000490699 H3BQ06 376 aaPredicted RBP11.39□□□□□ -0.59
VARS2-210ENST00000490699 IRAK2O43187 625 aa11.39□□□□□ -0.59
VARS2-210ENST00000490699 BUB1BO60566 1050 aaPredicted RBP11.39□□□□□ -0.59
VARS2-210ENST00000490699 TADA3O75528 432 aa11.39□□□□□ -0.59
VARS2-210ENST00000490699 PALMO75781 387 aa11.39□□□□□ -0.59
VARS2-210ENST00000490699 TUBB4AP04350 444 aa11.39□□□□□ -0.59
VARS2-210ENST00000490699 GJA1P17302 382 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms