RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 LEXMQ3ZCV2 418 aa4.5□□□□□ -1.69
HMGN1-218ENST00000490032 SLC9C1Q4G0N8 1177 aa4.5□□□□□ -1.69
HMGN1-218ENST00000490032 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.5□□□□□ -1.69
HMGN1-218ENST00000490032 ANKRD13AQ8IZ07 590 aa4.5□□□□□ -1.69
HMGN1-218ENST00000490032 SAMD14Q8IZD0 417 aaPredicted RBP4.5□□□□□ -1.69
HMGN1-218ENST00000490032 TRMOQ9BU70 441 aa4.5□□□□□ -1.69
HMGN1-218ENST00000490032 FOXP1Q9H334 677 aaPredicted RBP4.5□□□□□ -1.69
HMGN1-218ENST00000490032 ZBTB26Q9HCK0 441 aa4.5□□□□□ -1.69
HMGN1-218ENST00000490032 PNPLA8Q9NP80 782 aa4.5□□□□□ -1.69
HMGN1-218ENST00000490032 RXFP3Q9NSD7 469 aa4.5□□□□□ -1.69
HMGN1-218ENST00000490032 FAM90A10PA6NDY2 464 aa4.49□□□□□ -1.69
HMGN1-218ENST00000490032 C16orf96A6NNT2 1141 aa4.49□□□□□ -1.69
HMGN1-218ENST00000490032 RRHO14718 337 aa4.49□□□□□ -1.69
HMGN1-218ENST00000490032 INPPL1O15357 1258 aa4.49□□□□□ -1.69
HMGN1-218ENST00000490032 KCNQ3O43525 872 aa4.49□□□□□ -1.69
HMGN1-218ENST00000490032 ARP10275 920 aa4.49□□□□□ -1.69
HMGN1-218ENST00000490032 CYP19A1P11511 503 aaPredicted RBP4.49□□□□□ -1.69
HMGN1-218ENST00000490032 WDR5P61964 334 aaKnown RBP4.49□□□□□ -1.69
HMGN1-218ENST00000490032 RAPGEF1Q13905 1077 aa4.49□□□□□ -1.69
HMGN1-218ENST00000490032 KPNB1Q14974 876 aaKnown RBP4.49□□□□□ -1.69
HMGN1-218ENST00000490032 EARS2Q5JPH6 523 aaKnown RBP4.49□□□□□ -1.69
HMGN1-218ENST00000490032 ABLIM2Q6H8Q1 611 aa4.49□□□□□ -1.69
HMGN1-218ENST00000490032 ZDHHC17Q8IUH5 632 aa4.49□□□□□ -1.69
HMGN1-218ENST00000490032 P3H2Q8IVL5 708 aa4.49□□□□□ -1.69
HMGN1-218ENST00000490032 ARFGAP1Q8N6T3 406 aa4.49□□□□□ -1.69
HMGN1-218ENST00000490032 MPLKIPQ8TAP9 179 aa4.49□□□□□ -1.69
HMGN1-218ENST00000490032 BCAS4Q8TDM0 211 aa4.49□□□□□ -1.69
HMGN1-218ENST00000490032 NSMCE1Q8WV22 266 aa4.49□□□□□ -1.69
HMGN1-218ENST00000490032 TTC17Q96AE7 1141 aa4.49□□□□□ -1.69
HMGN1-218ENST00000490032 IQCDQ96DY2 449 aa4.49□□□□□ -1.69
HMGN1-218ENST00000490032 APOL5Q9BWW9 433 aa4.49□□□□□ -1.69
HMGN1-218ENST00000490032 TM2D2Q9BX73 214 aa4.49□□□□□ -1.69
HMGN1-218ENST00000490032 RNF26Q9BY78 433 aaPredicted RBP4.49□□□□□ -1.69
HMGN1-218ENST00000490032 EBF3Q9H4W6 596 aa4.49□□□□□ -1.69
HMGN1-218ENST00000490032 AGO4Q9HCK5 861 aaKnown RBP4.49□□□□□ -1.69
HMGN1-218ENST00000490032 MLXIPLQ9NP71 852 aa4.49□□□□□ -1.69
HMGN1-218ENST00000490032 SNX13Q9Y5W8 968 aa4.49□□□□□ -1.69
HMGN1-218ENST00000490032 C2CD4BA6NLJ0 364 aa4.48□□□□□ -1.69
HMGN1-218ENST00000490032 RHPN2P1A8MT19 583 aa4.48□□□□□ -1.69
HMGN1-218ENST00000490032 OAZ2O95190 189 aa4.48□□□□□ -1.69
HMGN1-218ENST00000490032 PLAUP00749 431 aa4.48□□□□□ -1.69
HMGN1-218ENST00000490032 HOXB6P17509 224 aaKnown RBP4.48□□□□□ -1.69
HMGN1-218ENST00000490032 ATF3P18847 181 aa4.48□□□□□ -1.69
HMGN1-218ENST00000490032 SLC5A2P31639 672 aa4.48□□□□□ -1.69
HMGN1-218ENST00000490032 ATICP31939 592 aa4.48□□□□□ -1.69
HMGN1-218ENST00000490032 PBX1P40424 430 aa4.48□□□□□ -1.69
HMGN1-218ENST00000490032 ME1P48163 572 aa4.48□□□□□ -1.69
HMGN1-218ENST00000490032 RAE1P78406 368 aaKnown RBP4.48□□□□□ -1.69
HMGN1-218ENST00000490032 ZNF543Q08ER8 600 aa4.48□□□□□ -1.69
HMGN1-218ENST00000490032 MTX1Q13505 466 aa4.48□□□□□ -1.69
HMGN1-218ENST00000490032 STIM1Q13586 685 aa4.48□□□□□ -1.69
HMGN1-218ENST00000490032 FAM90A2PQ658T7 463 aa4.48□□□□□ -1.69
HMGN1-218ENST00000490032 TFAP2DQ7Z6R9 452 aa4.48□□□□□ -1.69
HMGN1-218ENST00000490032 DGKHQ86XP1 1220 aa4.48□□□□□ -1.69
HMGN1-218ENST00000490032 RNF152Q8N8N0 203 aa4.48□□□□□ -1.69
HMGN1-218ENST00000490032 ATP11CQ8NB49 1132 aa4.48□□□□□ -1.69
HMGN1-218ENST00000490032 ZNF548Q8NEK5 533 aaPredicted RBP4.48□□□□□ -1.69
HMGN1-218ENST00000490032 TIFAQ96CG3 184 aa4.48□□□□□ -1.69
HMGN1-218ENST00000490032 FCRL5Q96RD9 977 aa4.48□□□□□ -1.69
HMGN1-218ENST00000490032 GATA5Q9BWX5 397 aaPredicted RBP4.48□□□□□ -1.69
HMGN1-218ENST00000490032 ABHD10Q9NUJ1 306 aa4.48□□□□□ -1.69
HMGN1-218ENST00000490032 POT1Q9NUX5 634 aa4.48□□□□□ -1.69
HMGN1-218ENST00000490032 CORO2BQ9UQ03 480 aa4.48□□□□□ -1.69
HMGN1-218ENST00000490032 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.48□□□□□ -1.69
HMGN1-218ENST00000490032 HS3ST3B1Q9Y662 390 aa4.48□□□□□ -1.69
HMGN1-218ENST00000490032 TOMM40O96008 361 aa4.47□□□□□ -1.69
HMGN1-218ENST00000490032 CD63P08962 238 aa4.47□□□□□ -1.69
HMGN1-218ENST00000490032 SNHG28P0DPA3 235 aa4.47□□□□□ -1.69
HMGN1-218ENST00000490032 DUSP1P28562 367 aa4.47□□□□□ -1.69
HMGN1-218ENST00000490032 PIK3CBP42338 1070 aa4.47□□□□□ -1.69
HMGN1-218ENST00000490032 B4GALNT1Q00973 533 aa4.47□□□□□ -1.69
HMGN1-218ENST00000490032 RRAGBQ5VZM2 374 aa4.47□□□□□ -1.69
HMGN1-218ENST00000490032 USP17L6PQ6QN14 398 aa4.47□□□□□ -1.69
HMGN1-218ENST00000490032 ABHD5Q8WTS1 349 aa4.47□□□□□ -1.69
HMGN1-218ENST00000490032 TMEM8AQ9HCN3 771 aa4.47□□□□□ -1.69
HMGN1-218ENST00000490032 ARL8BQ9NVJ2 186 aa4.47□□□□□ -1.69
HMGN1-218ENST00000490032 SIRT4Q9Y6E7 314 aaPredicted RBP4.47□□□□□ -1.69
HMGN1-218ENST00000490032 TTBK1Q5TCY1 1321 aaPredicted RBP4.46□□□□□ -1.69
HMGN1-218ENST00000490032 OR2W5A6NFC9 320 aa4.46□□□□□ -1.7
HMGN1-218ENST00000490032 CD8B2A6NJW9 211 aa4.46□□□□□ -1.7
HMGN1-218ENST00000490032 USP12O75317 370 aa4.46□□□□□ -1.7
HMGN1-218ENST00000490032 TSHRP16473 764 aa4.46□□□□□ -1.7
HMGN1-218ENST00000490032 FGFR2P21802 821 aa4.46□□□□□ -1.7
HMGN1-218ENST00000490032 RPS6KB1P23443 525 aa4.46□□□□□ -1.7
HMGN1-218ENST00000490032 MST1P26927 711 aa4.46□□□□□ -1.7
HMGN1-218ENST00000490032 HOXA7P31268 230 aaPredicted RBP4.46□□□□□ -1.7
HMGN1-218ENST00000490032 IDUAP35475 653 aa4.46□□□□□ -1.7
HMGN1-218ENST00000490032 CPA2P48052 419 aa4.46□□□□□ -1.7
HMGN1-218ENST00000490032 CASP5P51878 434 aa4.46□□□□□ -1.7
HMGN1-218ENST00000490032 GPS1Q13098 491 aa4.46□□□□□ -1.7
HMGN1-218ENST00000490032 CNGA3Q16281 694 aa4.46□□□□□ -1.7
HMGN1-218ENST00000490032 MRNIPQ6NTE8 343 aa4.46□□□□□ -1.7
HMGN1-218ENST00000490032 CRTC1Q6UUV9 634 aa4.46□□□□□ -1.7
HMGN1-218ENST00000490032 CRELD2Q6UXH1 353 aaPredicted RBP4.46□□□□□ -1.7
HMGN1-218ENST00000490032 RBM44Q6ZP01 1051 aaKnown RBP4.46□□□□□ -1.7
HMGN1-218ENST00000490032 KIAA0408Q6ZU52 694 aa4.46□□□□□ -1.7
HMGN1-218ENST00000490032 TRMT61AQ96FX7 289 aaKnown RBP4.46□□□□□ -1.7
HMGN1-218ENST00000490032 COLEC11Q9BWP8 271 aa4.46□□□□□ -1.7
HMGN1-218ENST00000490032 ZBTB40Q9NUA8 1239 aa4.46□□□□□ -1.7
HMGN1-218ENST00000490032 TMOD4Q9NZQ9 345 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms