RNA–Protein interactions for RNA: ENST00000489563.1

AC055855.1-201, humanhuman

BASIC

Gene AC055855.1, Length 579 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055855.1-201ENST00000489563 RENBPP51606 427 aa4.04□□□□□ -1.76
AC055855.1-201ENST00000489563 COPB1P53618 953 aaKnown RBP4.04□□□□□ -1.76
AC055855.1-201ENST00000489563 CACNA2D1P54289 1103 aa4.04□□□□□ -1.76
AC055855.1-201ENST00000489563 PSG6Q00889 435 aa4.04□□□□□ -1.76
AC055855.1-201ENST00000489563 DPTQ07507 201 aa4.04□□□□□ -1.76
AC055855.1-201ENST00000489563 LMAN2Q12907 356 aa4.04□□□□□ -1.76
AC055855.1-201ENST00000489563 BIRC3Q13489 604 aa4.04□□□□□ -1.76
AC055855.1-201ENST00000489563 KCNJ12Q14500 433 aa4.04□□□□□ -1.76
AC055855.1-201ENST00000489563 RPS6KA2Q15349 733 aa4.04□□□□□ -1.76
AC055855.1-201ENST00000489563 BTBD16Q32M84 506 aa4.04□□□□□ -1.76
AC055855.1-201ENST00000489563 ZNF569Q5MCW4 686 aa4.04□□□□□ -1.76
AC055855.1-201ENST00000489563 JMJD6Q6NYC1 403 aaPredicted RBP4.04□□□□□ -1.76
AC055855.1-201ENST00000489563 MSANTD2Q6P1R3 559 aa4.04□□□□□ -1.76
AC055855.1-201ENST00000489563 KIRREL2Q6UWL6 708 aa4.04□□□□□ -1.76
AC055855.1-201ENST00000489563 OLFML1Q6UWY5 402 aa4.04□□□□□ -1.76
AC055855.1-201ENST00000489563 LDHAL6AQ6ZMR3 332 aa4.04□□□□□ -1.76
AC055855.1-201ENST00000489563 PIK3AP1Q6ZUJ8 805 aa4.04□□□□□ -1.76
AC055855.1-201ENST00000489563 RFX8Q6ZV50 586 aa4.04□□□□□ -1.76
AC055855.1-201ENST00000489563 SLC44A2Q8IWA5 706 aaPredicted RBP4.04□□□□□ -1.76
AC055855.1-201ENST00000489563 SMAP1Q8IYB5 467 aaPredicted RBP4.04□□□□□ -1.76
AC055855.1-201ENST00000489563 CPXCR1Q8N123 301 aa4.04□□□□□ -1.76
AC055855.1-201ENST00000489563 CLASRPQ8N2M8 674 aaKnown RBP4.04□□□□□ -1.76
AC055855.1-201ENST00000489563 SLC16A11Q8NCK7 471 aa4.04□□□□□ -1.76
AC055855.1-201ENST00000489563 OR1N1Q8NGS0 311 aa4.04□□□□□ -1.76
AC055855.1-201ENST00000489563 GPR150Q8NGU9 434 aa4.04□□□□□ -1.76
AC055855.1-201ENST00000489563 STT3BQ8TCJ2 826 aa4.04□□□□□ -1.76
AC055855.1-201ENST00000489563 OTUD7AQ8TE49 926 aaPredicted RBP4.04□□□□□ -1.76
AC055855.1-201ENST00000489563 TBC1D5Q92609 795 aa4.04□□□□□ -1.76
AC055855.1-201ENST00000489563 RSC1A1Q92681 617 aa4.04□□□□□ -1.76
AC055855.1-201ENST00000489563 CIPCQ9C0C6 399 aa4.04□□□□□ -1.76
AC055855.1-201ENST00000489563 SCAND2PQ9GZW5 306 aaPredicted RBP4.04□□□□□ -1.76
AC055855.1-201ENST00000489563 PABPC3Q9H361 631 aaKnown RBP4.04□□□□□ -1.76
AC055855.1-201ENST00000489563 MLXIPQ9HAP2 919 aa4.04□□□□□ -1.76
AC055855.1-201ENST00000489563 FBXO28Q9NVF7 368 aa4.04□□□□□ -1.76
AC055855.1-201ENST00000489563 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.04□□□□□ -1.76
AC055855.1-201ENST00000489563 VPS4AQ9UN37 437 aa4.04□□□□□ -1.76
AC055855.1-201ENST00000489563 PCDHGB3Q9Y5G1 929 aa4.04□□□□□ -1.76
AC055855.1-201ENST00000489563 ENTPD2Q9Y5L3 495 aa4.04□□□□□ -1.76
AC055855.1-201ENST00000489563 MED1Q15648 1581 aaPredicted RBP4.03□□□□□ -1.76
AC055855.1-201ENST00000489563 CTIFO43310 598 aaKnown RBP4.03□□□□□ -1.76
AC055855.1-201ENST00000489563 DHHO43323 396 aa4.03□□□□□ -1.76
AC055855.1-201ENST00000489563 CREB3O43889 395 aa4.03□□□□□ -1.76
AC055855.1-201ENST00000489563 PPP6R2O75170 966 aa4.03□□□□□ -1.76
AC055855.1-201ENST00000489563 RPP40O75818 363 aaKnown RBP4.03□□□□□ -1.76
AC055855.1-201ENST00000489563 TMIGD3P0DMS9 266 aaPredicted RBP4.03□□□□□ -1.76
AC055855.1-201ENST00000489563 ALADP13716 330 aa4.03□□□□□ -1.76
AC055855.1-201ENST00000489563 VEGFAP15692 232 aaPredicted RBP4.03□□□□□ -1.76
AC055855.1-201ENST00000489563 PROZP22891 400 aa4.03□□□□□ -1.76
AC055855.1-201ENST00000489563 CCT5P48643 541 aa4.03□□□□□ -1.76
AC055855.1-201ENST00000489563 SOX10P56693 466 aa4.03□□□□□ -1.76
AC055855.1-201ENST00000489563 TGFB2P61812 414 aa4.03□□□□□ -1.76
AC055855.1-201ENST00000489563 CYP4F2P78329 520 aa4.03□□□□□ -1.76
AC055855.1-201ENST00000489563 CCDC15Q0P6D6 951 aa4.03□□□□□ -1.76
AC055855.1-201ENST00000489563 DNASE1L3Q13609 305 aa4.03□□□□□ -1.76
AC055855.1-201ENST00000489563 RAPGEF1Q13905 1077 aa4.03□□□□□ -1.76
AC055855.1-201ENST00000489563 TAF5Q15542 800 aa4.03□□□□□ -1.76
AC055855.1-201ENST00000489563 FAM90A2PQ658T7 463 aa4.03□□□□□ -1.76
AC055855.1-201ENST00000489563 TANGO2Q6ICL3 276 aa4.03□□□□□ -1.76
AC055855.1-201ENST00000489563 LIN54Q6MZP7 749 aa4.03□□□□□ -1.76
AC055855.1-201ENST00000489563 CEP85Q6P2H3 762 aa4.03□□□□□ -1.76
AC055855.1-201ENST00000489563 RAB11FIP2Q7L804 512 aa4.03□□□□□ -1.76
AC055855.1-201ENST00000489563 C12orf76Q8N812 135 aaPredicted RBP4.03□□□□□ -1.76
AC055855.1-201ENST00000489563 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.03□□□□□ -1.76
AC055855.1-201ENST00000489563 TERB1Q8NA31 727 aa4.03□□□□□ -1.76
AC055855.1-201ENST00000489563 SIMC1Q8NDZ2 872 aa4.03□□□□□ -1.76
AC055855.1-201ENST00000489563 SCAMP5Q8TAC9 235 aa4.03□□□□□ -1.76
AC055855.1-201ENST00000489563 SLC22A17Q8WUG5 538 aa4.03□□□□□ -1.76
AC055855.1-201ENST00000489563 HMGB4Q8WW32 186 aa4.03□□□□□ -1.76
AC055855.1-201ENST00000489563 C3orf49Q96BT1 292 aa4.03□□□□□ -1.76
AC055855.1-201ENST00000489563 DAZAP1Q96EP5 407 aaKnown RBP4.03□□□□□ -1.76
AC055855.1-201ENST00000489563 PRR11Q96HE9 360 aaPredicted RBP4.03□□□□□ -1.76
AC055855.1-201ENST00000489563 HS6ST2Q96MM7 605 aa4.03□□□□□ -1.76
AC055855.1-201ENST00000489563 TRAPPC9Q96Q05 1148 aa4.03□□□□□ -1.76
AC055855.1-201ENST00000489563 THAP7Q9BT49 309 aaPredicted RBP4.03□□□□□ -1.76
AC055855.1-201ENST00000489563 ISCA1Q9BUE6 129 aa4.03□□□□□ -1.76
AC055855.1-201ENST00000489563 PCED1AQ9H1Q7 454 aa4.03□□□□□ -1.76
AC055855.1-201ENST00000489563 TAF1DQ9H5J8 278 aaPredicted RBP4.03□□□□□ -1.76
AC055855.1-201ENST00000489563 CCDC134Q9H6E4 229 aa4.03□□□□□ -1.76
AC055855.1-201ENST00000489563 ELAC1Q9H777 363 aaKnown RBP4.03□□□□□ -1.76
AC055855.1-201ENST00000489563 SAP30LQ9HAJ7 183 aa4.03□□□□□ -1.76
AC055855.1-201ENST00000489563 SAYSD1Q9NPB0 183 aa4.03□□□□□ -1.76
AC055855.1-201ENST00000489563 PRDM8Q9NQV8 689 aa4.03□□□□□ -1.76
AC055855.1-201ENST00000489563 ASB6Q9NWX5 421 aa4.03□□□□□ -1.76
AC055855.1-201ENST00000489563 SH3BP4Q9P0V3 963 aa4.03□□□□□ -1.76
AC055855.1-201ENST00000489563 LUZP4Q9P127 313 aa4.03□□□□□ -1.76
AC055855.1-201ENST00000489563 NFU1Q9UMS0 254 aa4.03□□□□□ -1.76
AC055855.1-201ENST00000489563 PCDHB7Q9Y5E2 793 aa4.03□□□□□ -1.76
AC055855.1-201ENST00000489563 PCDHB2Q9Y5E7 798 aa4.03□□□□□ -1.76
AC055855.1-201ENST00000489563 FNDC1Q4ZHG4 1894 aaPredicted RBP4.03□□□□□ -1.77
AC055855.1-201ENST00000489563 CEP350Q5VT06 3117 aa4.02□□□□□ -1.77
AC055855.1-201ENST00000489563 POLR2AP24928 1970 aaKnown RBP4.02□□□□□ -1.77
AC055855.1-201ENST00000489563 EFCAB8A8MWE9 144 aa4.02□□□□□ -1.77
AC055855.1-201ENST00000489563 KIF28PB7ZC32 967 aa4.02□□□□□ -1.77
AC055855.1-201ENST00000489563 NPHP1O15259 732 aa4.02□□□□□ -1.77
AC055855.1-201ENST00000489563 IRAK2O43187 625 aa4.02□□□□□ -1.77
AC055855.1-201ENST00000489563 JTBO76095 146 aa4.02□□□□□ -1.77
AC055855.1-201ENST00000489563 GPD1P21695 349 aa4.02□□□□□ -1.77
AC055855.1-201ENST00000489563 IGHMBP2P38935 993 aaKnown RBP4.02□□□□□ -1.77
AC055855.1-201ENST00000489563 HOXA4Q00056 320 aaPredicted RBP4.02□□□□□ -1.77
AC055855.1-201ENST00000489563 CBFBQ13951 182 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms