RNA–Protein interactions for RNA: ENST00000489303.1

LMO4-203, Transcript of LIM domain only 4, humanhuman

TSL 2

Gene LMO4, Length 952 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-203ENST00000489303 TMEM25Q86YD3 366 aa14.13□□□□□ -0.15
LMO4-203ENST00000489303 CAMKK1Q8N5S9 505 aa14.13□□□□□ -0.15
LMO4-203ENST00000489303 FAM160A2Q8N612 972 aaPredicted RBP14.13□□□□□ -0.15
LMO4-203ENST00000489303 NAT16Q8N8M0 369 aa14.13□□□□□ -0.15
LMO4-203ENST00000489303 ZNF606Q8WXB4 792 aa14.13□□□□□ -0.15
LMO4-203ENST00000489303 NDRG1Q92597 394 aaKnown RBP14.13□□□□□ -0.15
LMO4-203ENST00000489303 WBP2Q969T9 261 aa14.13□□□□□ -0.15
LMO4-203ENST00000489303 PLD4Q96BZ4 506 aa14.13□□□□□ -0.15
LMO4-203ENST00000489303 ZSWIM1Q9BR11 485 aa14.13□□□□□ -0.15
LMO4-203ENST00000489303 BBS2Q9BXC9 721 aa14.13□□□□□ -0.15
LMO4-203ENST00000489303 RXFP3Q9NSD7 469 aa14.13□□□□□ -0.15
LMO4-203ENST00000489303 SEMA4GQ9NTN9 838 aa14.13□□□□□ -0.15
LMO4-203ENST00000489303 DNAJC12Q9UKB3 198 aa14.13□□□□□ -0.15
LMO4-203ENST00000489303 EML5Q05BV3 1969 aa14.13□□□□□ -0.15
LMO4-203ENST00000489303 SPTBN2O15020 2390 aa14.12□□□□□ -0.15
LMO4-203ENST00000489303 HELZP42694 1942 aaKnown RBP14.12□□□□□ -0.15
LMO4-203ENST00000489303 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.12□□□□□ -0.15
LMO4-203ENST00000489303 TBC1D3BA6NDS4 549 aa14.12□□□□□ -0.15
LMO4-203ENST00000489303 YJEFN3A6XGL0 299 aa14.12□□□□□ -0.15
LMO4-203ENST00000489303 E7ENQ6 273 aa14.12□□□□□ -0.15
LMO4-203ENST00000489303 NEDD8-MDP1E9PL57 170 aa14.12□□□□□ -0.15
LMO4-203ENST00000489303 GREM1O60565 184 aa14.12□□□□□ -0.15
LMO4-203ENST00000489303 CYBBP04839 570 aa14.12□□□□□ -0.15
LMO4-203ENST00000489303 RETP07949 1114 aa14.12□□□□□ -0.15
LMO4-203ENST00000489303 CORO1AP31146 461 aaKnown RBP14.12□□□□□ -0.15
LMO4-203ENST00000489303 TNFRSF4P43489 277 aa14.12□□□□□ -0.15
LMO4-203ENST00000489303 HARS2P49590 506 aaKnown RBP14.12□□□□□ -0.15
LMO4-203ENST00000489303 SEC13P55735 322 aa14.12□□□□□ -0.15
LMO4-203ENST00000489303 BPIFB4P59827 614 aa14.12□□□□□ -0.15
LMO4-203ENST00000489303 MRPS21P82921 87 aaKnown RBP14.12□□□□□ -0.15
LMO4-203ENST00000489303 LMNB2Q03252 620 aa14.12□□□□□ -0.15
LMO4-203ENST00000489303 KDSRQ06136 332 aa14.12□□□□□ -0.15
LMO4-203ENST00000489303 GAB4Q2WGN9 574 aa14.12□□□□□ -0.15
LMO4-203ENST00000489303 C2orf27AQ580R0 203 aa14.12□□□□□ -0.15
LMO4-203ENST00000489303 MIIPQ5JXC2 388 aa14.12□□□□□ -0.15
LMO4-203ENST00000489303 FKBP15Q5T1M5 1219 aa14.12□□□□□ -0.15
LMO4-203ENST00000489303 SYT13Q7L8C5 426 aa14.12□□□□□ -0.15
LMO4-203ENST00000489303 FMNL3Q8IVF7 1028 aa14.12□□□□□ -0.15
LMO4-203ENST00000489303 STK32AQ8WU08 396 aa14.12□□□□□ -0.15
LMO4-203ENST00000489303 SHC3Q92529 594 aa14.12□□□□□ -0.15
LMO4-203ENST00000489303 EDEM1Q92611 657 aa14.12□□□□□ -0.15
LMO4-203ENST00000489303 TRIM62Q9BVG3 475 aa14.12□□□□□ -0.15
LMO4-203ENST00000489303 MIS12Q9H081 205 aa14.12□□□□□ -0.15
LMO4-203ENST00000489303 SMOC1Q9H4F8 434 aa14.12□□□□□ -0.15
LMO4-203ENST00000489303 MARK1Q9P0L2 795 aa14.12□□□□□ -0.15
LMO4-203ENST00000489303 CDV3Q9UKY7 258 aaKnown RBP14.12□□□□□ -0.15
LMO4-203ENST00000489303 HBS1LQ9Y450 684 aaKnown RBP14.12□□□□□ -0.15
LMO4-203ENST00000489303 K7EQS6 105 aa14.11□□□□□ -0.15
LMO4-203ENST00000489303 PIK3R2O00459 728 aa14.11□□□□□ -0.15
LMO4-203ENST00000489303 AXIN1O15169 862 aa14.11□□□□□ -0.15
LMO4-203ENST00000489303 TULP3O75386 442 aa14.11□□□□□ -0.15
LMO4-203ENST00000489303 LTFP02788 710 aa14.11□□□□□ -0.15
LMO4-203ENST00000489303 TYRP14679 529 aa14.11□□□□□ -0.15
LMO4-203ENST00000489303 GPD2P43304 727 aa14.11□□□□□ -0.15
LMO4-203ENST00000489303 SNX16P57768 344 aa14.11□□□□□ -0.15
LMO4-203ENST00000489303 APBA1Q02410 837 aa14.11□□□□□ -0.15
LMO4-203ENST00000489303 DMC1Q14565 340 aa14.11□□□□□ -0.15
LMO4-203ENST00000489303 HSF5Q4G112 596 aaPredicted RBP14.11□□□□□ -0.15
LMO4-203ENST00000489303 GRAMD4Q6IC98 578 aa14.11□□□□□ -0.15
LMO4-203ENST00000489303 DENND1BQ6P3S1 775 aa14.11□□□□□ -0.15
LMO4-203ENST00000489303 Q6ZNB5 142 aa14.11□□□□□ -0.15
LMO4-203ENST00000489303 PRR23CQ6ZRP0 262 aa14.11□□□□□ -0.15
LMO4-203ENST00000489303 TRMT11Q7Z4G4 463 aaKnown RBP14.11□□□□□ -0.15
LMO4-203ENST00000489303 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.11□□□□□ -0.15
LMO4-203ENST00000489303 KBTBD6Q86V97 674 aa14.11□□□□□ -0.15
LMO4-203ENST00000489303 WDR5BQ86VZ2 330 aa14.11□□□□□ -0.15
LMO4-203ENST00000489303 C12orf40Q86WS4 652 aa14.11□□□□□ -0.15
LMO4-203ENST00000489303 DENND1CQ8IV53 801 aa14.11□□□□□ -0.15
LMO4-203ENST00000489303 GPR161Q8N6U8 529 aaKnown RBP14.11□□□□□ -0.15
LMO4-203ENST00000489303 USP33Q8TEY7 942 aa14.11□□□□□ -0.15
LMO4-203ENST00000489303 CNTNAP3BQ96NU0 1288 aa14.11□□□□□ -0.15
LMO4-203ENST00000489303 NOX5Q96PH1 765 aa14.11□□□□□ -0.15
LMO4-203ENST00000489303 HHIPQ96QV1 700 aa14.11□□□□□ -0.15
LMO4-203ENST00000489303 CNTNAP3Q9BZ76 1288 aa14.11□□□□□ -0.15
LMO4-203ENST00000489303 NAT10Q9H0A0 1025 aaKnown RBP14.11□□□□□ -0.15
LMO4-203ENST00000489303 DNAJC17Q9NVM6 304 aaKnown RBP14.11□□□□□ -0.15
LMO4-203ENST00000489303 TAB2Q9NYJ8 693 aa14.11□□□□□ -0.15
LMO4-203ENST00000489303 SFMBT1Q9UHJ3 866 aa14.11□□□□□ -0.15
LMO4-203ENST00000489303 CEP83Q9Y592 693 aa14.11□□□□□ -0.15
LMO4-203ENST00000489303 MYO16Q9Y6X6 1858 aa14.11□□□□□ -0.15
LMO4-203ENST00000489303 SDK1Q7Z5N4 2213 aa14.11□□□□□ -0.15
LMO4-203ENST00000489303 RALGAPA1Q6GYQ0 2036 aa14.1□□□□□ -0.15
LMO4-203ENST00000489303 A0A0A0MRY4 1105 aa14.1□□□□□ -0.15
LMO4-203ENST00000489303 CCDC163A0A0D9SF12 145 aa14.1□□□□□ -0.15
LMO4-203ENST00000489303 BECN2A8MW95 431 aa14.1□□□□□ -0.15
LMO4-203ENST00000489303 PRR5-ARHGAP8B1AHC4 643 aa14.1□□□□□ -0.15
LMO4-203ENST00000489303 CAPN9O14815 690 aa14.1□□□□□ -0.15
LMO4-203ENST00000489303 APBB3O95704 486 aa14.1□□□□□ -0.15
LMO4-203ENST00000489303 CDK11BP21127 795 aaKnown RBP14.1□□□□□ -0.15
LMO4-203ENST00000489303 KRT9P35527 623 aa14.1□□□□□ -0.15
LMO4-203ENST00000489303 ARHGAP8P85298 464 aa14.1□□□□□ -0.15
LMO4-203ENST00000489303 MYL5Q02045 173 aa14.1□□□□□ -0.15
LMO4-203ENST00000489303 RAPGEF1Q13905 1077 aa14.1□□□□□ -0.15
LMO4-203ENST00000489303 SF3A2Q15428 464 aaKnown RBP14.1□□□□□ -0.15
LMO4-203ENST00000489303 CEP68Q76N32 757 aa14.1□□□□□ -0.15
LMO4-203ENST00000489303 BHLHA9Q7RTU4 235 aa14.1□□□□□ -0.15
LMO4-203ENST00000489303 SFTPA1Q8IWL2 248 aa14.1□□□□□ -0.15
LMO4-203ENST00000489303 ETFBKMTQ8IXQ9 262 aa14.1□□□□□ -0.15
LMO4-203ENST00000489303 TSTD1Q8NFU3 115 aa14.1□□□□□ -0.15
LMO4-203ENST00000489303 KCNV2Q8TDN2 545 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms