RNA–Protein interactions for RNA: ENST00000489212.2

LIME1-207, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 559 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-207ENST00000489212 MED7O43513 233 aa22.13■■□□□ 1.13
LIME1-207ENST00000489212 CACNG3O60359 315 aa22.13■■□□□ 1.13
LIME1-207ENST00000489212 MBD3O95983 291 aa22.13■■□□□ 1.13
LIME1-207ENST00000489212 EEF1GP26641 437 aaKnown RBP22.13■■□□□ 1.13
LIME1-207ENST00000489212 KIR2DL1P43626 348 aaPredicted RBP22.13■■□□□ 1.13
LIME1-207ENST00000489212 TRIP4Q15650 581 aaPredicted RBP22.13■■□□□ 1.13
LIME1-207ENST00000489212 MEA1Q16626 185 aa22.13■■□□□ 1.13
LIME1-207ENST00000489212 CDKAL1Q5VV42 579 aa22.13■■□□□ 1.13
LIME1-207ENST00000489212 DENND1CQ8IV53 801 aa22.13■■□□□ 1.13
LIME1-207ENST00000489212 DCLK2Q8N568 766 aa22.13■■□□□ 1.13
LIME1-207ENST00000489212 CCDC33Q8N5R6 958 aa22.13■■□□□ 1.13
LIME1-207ENST00000489212 CCDC26Q8TAB7 109 aa22.13■■□□□ 1.13
LIME1-207ENST00000489212 RNF139Q8WU17 664 aa22.13■■□□□ 1.13
LIME1-207ENST00000489212 BHMTQ93088 406 aa22.13■■□□□ 1.13
LIME1-207ENST00000489212 ACDQ96AP0 544 aa22.13■■□□□ 1.13
LIME1-207ENST00000489212 DCLK3Q9C098 648 aa22.13■■□□□ 1.13
LIME1-207ENST00000489212 ZDHHC4Q9NPG8 344 aa22.13■■□□□ 1.13
LIME1-207ENST00000489212 ST7Q9NRC1 585 aa22.13■■□□□ 1.13
LIME1-207ENST00000489212 WDR35Q9P2L0 1181 aa22.13■■□□□ 1.13
LIME1-207ENST00000489212 ZNF510Q9Y2H8 683 aa22.13■■□□□ 1.13
LIME1-207ENST00000489212 SDK1Q7Z5N4 2213 aa22.12■■□□□ 1.13
LIME1-207ENST00000489212 EML5Q05BV3 1969 aa22.12■■□□□ 1.13
LIME1-207ENST00000489212 MSI1O43347 362 aaKnown RBP22.12■■□□□ 1.13
LIME1-207ENST00000489212 FBXO21O94952 628 aa22.12■■□□□ 1.13
LIME1-207ENST00000489212 LTFP02788 710 aa22.12■■□□□ 1.13
LIME1-207ENST00000489212 TNFRSF4P43489 277 aa22.12■■□□□ 1.13
LIME1-207ENST00000489212 MRPS21P82921 87 aaKnown RBP22.12■■□□□ 1.13
LIME1-207ENST00000489212 CCDC183Q5T5S1 534 aa22.12■■□□□ 1.13
LIME1-207ENST00000489212 MSANTD2Q6P1R3 559 aa22.12■■□□□ 1.13
LIME1-207ENST00000489212 SASS6Q6UVJ0 657 aa22.12■■□□□ 1.13
LIME1-207ENST00000489212 SCUBE3Q8IX30 993 aa22.12■■□□□ 1.13
LIME1-207ENST00000489212 TERB1Q8NA31 727 aa22.12■■□□□ 1.13
LIME1-207ENST00000489212 PLD4Q96BZ4 506 aa22.12■■□□□ 1.13
LIME1-207ENST00000489212 SLC4A5Q9BY07 1137 aa22.12■■□□□ 1.13
LIME1-207ENST00000489212 DNAJC17Q9NVM6 304 aaKnown RBP22.12■■□□□ 1.13
LIME1-207ENST00000489212 PLK2Q9NYY3 685 aa22.12■■□□□ 1.13
LIME1-207ENST00000489212 HCN2Q9UL51 889 aa22.12■■□□□ 1.13
LIME1-207ENST00000489212 TBC1D3BA6NDS4 549 aa22.11■■□□□ 1.13
LIME1-207ENST00000489212 PES1O00541 588 aaKnown RBP22.11■■□□□ 1.13
LIME1-207ENST00000489212 FYNP06241 537 aa22.11■■□□□ 1.13
LIME1-207ENST00000489212 HNRNPLP14866 589 aaKnown RBP eCLIP22.11■■□□□ 1.13
LIME1-207ENST00000489212 CLCN1P35523 988 aa22.11■■□□□ 1.13
LIME1-207ENST00000489212 TIE1P35590 1138 aa22.11■■□□□ 1.13
LIME1-207ENST00000489212 KRT31Q15323 416 aa22.11■■□□□ 1.13
LIME1-207ENST00000489212 LPAL2Q16609 132 aa22.11■■□□□ 1.13
LIME1-207ENST00000489212 KLHDC7AQ5VTJ3 777 aa22.11■■□□□ 1.13
LIME1-207ENST00000489212 TOGARAM2Q6ZUX3 1019 aa22.11■■□□□ 1.13
LIME1-207ENST00000489212 WDTC1Q8N5D0 677 aa22.11■■□□□ 1.13
LIME1-207ENST00000489212 CAMKK1Q8N5S9 505 aa22.11■■□□□ 1.13
LIME1-207ENST00000489212 ALLCQ8N6M5 410 aa22.11■■□□□ 1.13
LIME1-207ENST00000489212 IL17RCQ8NAC3 791 aa22.11■■□□□ 1.13
LIME1-207ENST00000489212 STK32AQ8WU08 396 aa22.11■■□□□ 1.13
LIME1-207ENST00000489212 RUBCNQ92622 972 aa22.11■■□□□ 1.13
LIME1-207ENST00000489212 ANO10Q9NW15 660 aa22.11■■□□□ 1.13
LIME1-207ENST00000489212 FANCLQ9NW38 375 aa22.11■■□□□ 1.13
LIME1-207ENST00000489212 TMEM63CQ9P1W3 806 aa22.11■■□□□ 1.13
LIME1-207ENST00000489212 TJP2Q9UDY2 1190 aa22.11■■□□□ 1.13
LIME1-207ENST00000489212 MMP17Q9ULZ9 603 aa22.11■■□□□ 1.13
LIME1-207ENST00000489212 HBS1LQ9Y450 684 aaKnown RBP22.11■■□□□ 1.13
LIME1-207ENST00000489212 FHOD1Q9Y613 1164 aa22.11■■□□□ 1.13
LIME1-207ENST00000489212 E5RJQ4 531 aa22.1■■□□□ 1.13
LIME1-207ENST00000489212 PAPSS1O43252 624 aaPredicted RBP22.1■■□□□ 1.13
LIME1-207ENST00000489212 KLF8O95600 359 aaPredicted RBP22.1■■□□□ 1.13
LIME1-207ENST00000489212 PENKP01210 267 aaPredicted RBP22.1■■□□□ 1.13
LIME1-207ENST00000489212 CISD3P0C7P0 127 aa22.1■■□□□ 1.13
LIME1-207ENST00000489212 CNR2P34972 360 aa22.1■■□□□ 1.13
LIME1-207ENST00000489212 STX1AQ16623 288 aa22.1■■□□□ 1.13
LIME1-207ENST00000489212 FYB2Q5VWT5 728 aa22.1■■□□□ 1.13
LIME1-207ENST00000489212 GRAMD4Q6IC98 578 aa22.1■■□□□ 1.13
LIME1-207ENST00000489212 PRR23BQ6ZRT6 265 aa22.1■■□□□ 1.13
LIME1-207ENST00000489212 TMEM110Q86TL2 294 aa22.1■■□□□ 1.13
LIME1-207ENST00000489212 SLC47A2Q86VL8 602 aa22.1■■□□□ 1.13
LIME1-207ENST00000489212 FAM217AQ8IXS0 508 aa22.1■■□□□ 1.13
LIME1-207ENST00000489212 FAM71AQ8IYT1 594 aa22.1■■□□□ 1.13
LIME1-207ENST00000489212 TXNDC5Q8NBS9 432 aaKnown RBP22.1■■□□□ 1.13
LIME1-207ENST00000489212 XPO6Q96QU8 1125 aaKnown RBP22.1■■□□□ 1.13
LIME1-207ENST00000489212 LSM14BQ9BX40 385 aaKnown RBP22.1■■□□□ 1.13
LIME1-207ENST00000489212 VPS16Q9H269 839 aa22.1■■□□□ 1.13
LIME1-207ENST00000489212 FBXO10Q9UK96 956 aa22.1■■□□□ 1.13
LIME1-207ENST00000489212 SPAG17Q6Q759 2223 aa22.09■■□□□ 1.13
LIME1-207ENST00000489212 DMXL1Q9Y485 3027 aa22.09■■□□□ 1.13
LIME1-207ENST00000489212 CCDC163A0A0D9SF12 145 aa22.09■■□□□ 1.13
LIME1-207ENST00000489212 SGK1O00141 431 aa22.09■■□□□ 1.13
LIME1-207ENST00000489212 ADAM23O75077 832 aa22.09■■□□□ 1.13
LIME1-207ENST00000489212 APBB3O95704 486 aa22.09■■□□□ 1.13
LIME1-207ENST00000489212 CHKAP35790 457 aa22.09■■□□□ 1.13
LIME1-207ENST00000489212 ACADSBP45954 432 aa22.09■■□□□ 1.13
LIME1-207ENST00000489212 PDCLQ13371 301 aa22.09■■□□□ 1.13
LIME1-207ENST00000489212 SIM2Q14190 667 aaPredicted RBP22.09■■□□□ 1.13
LIME1-207ENST00000489212 DRAP1Q14919 205 aaPredicted RBP22.09■■□□□ 1.13
LIME1-207ENST00000489212 C10orf76Q5T2E6 689 aa22.09■■□□□ 1.13
LIME1-207ENST00000489212 SMYD5Q6GMV2 418 aa22.09■■□□□ 1.13
LIME1-207ENST00000489212 TMEM92Q6UXU6 159 aa22.09■■□□□ 1.13
LIME1-207ENST00000489212 PASD1Q8IV76 773 aa22.09■■□□□ 1.13
LIME1-207ENST00000489212 HINFPQ9BQA5 517 aa22.09■■□□□ 1.13
LIME1-207ENST00000489212 NAA15Q9BXJ9 866 aaKnown RBP22.09■■□□□ 1.13
LIME1-207ENST00000489212 PCDHGC3Q9UN70 934 aa22.09■■□□□ 1.13
LIME1-207ENST00000489212 PRRT4C9JH25 899 aa22.08■■□□□ 1.13
LIME1-207ENST00000489212 PTK2Q05397 1052 aa22.08■■□□□ 1.13
LIME1-207ENST00000489212 RAPGEF1Q13905 1077 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms