RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 IRF2BP1Q8IU81 584 aa14.68□□□□□ -0.06
VTI1A-206ENST00000489142 FMNL3Q8IVF7 1028 aa14.68□□□□□ -0.06
VTI1A-206ENST00000489142 ZNF276Q8N554 614 aa14.68□□□□□ -0.06
VTI1A-206ENST00000489142 ZNF513Q8N8E2 541 aaPredicted RBP14.68□□□□□ -0.06
VTI1A-206ENST00000489142 CCDC26Q8TAB7 109 aa14.68□□□□□ -0.06
VTI1A-206ENST00000489142 CDK5RAP1Q96SZ6 601 aaKnown RBP14.68□□□□□ -0.06
VTI1A-206ENST00000489142 ACOX2Q99424 681 aa14.68□□□□□ -0.06
VTI1A-206ENST00000489142 ARRDC1-AS1Q9H2J1 176 aa14.68□□□□□ -0.06
VTI1A-206ENST00000489142 ACP6Q9NPH0 428 aa14.68□□□□□ -0.06
VTI1A-206ENST00000489142 SEMA4GQ9NTN9 838 aa14.68□□□□□ -0.06
VTI1A-206ENST00000489142 EBF1Q9UH73 591 aa14.68□□□□□ -0.06
VTI1A-206ENST00000489142 AGO1Q9UL18 857 aaKnown RBP14.68□□□□□ -0.06
VTI1A-206ENST00000489142 KIAA1257Q9ULG3 409 aa14.68□□□□□ -0.06
VTI1A-206ENST00000489142 STRIP2Q9ULQ0 834 aa14.68□□□□□ -0.06
VTI1A-206ENST00000489142 NUP205Q92621 2012 aa14.67□□□□□ -0.06
VTI1A-206ENST00000489142 A0A0A0MRY4 1105 aa14.67□□□□□ -0.06
VTI1A-206ENST00000489142 TCRBV21S2A2A0A5A6 115 aa14.67□□□□□ -0.06
VTI1A-206ENST00000489142 PRRT4C9JH25 899 aa14.67□□□□□ -0.06
VTI1A-206ENST00000489142 SLC9A1P19634 815 aa14.67□□□□□ -0.06
VTI1A-206ENST00000489142 BCKDHBP21953 392 aa14.67□□□□□ -0.06
VTI1A-206ENST00000489142 GBP1P32455 592 aa14.67□□□□□ -0.06
VTI1A-206ENST00000489142 DAOAP59103 153 aa14.67□□□□□ -0.06
VTI1A-206ENST00000489142 COG7P83436 770 aa14.67□□□□□ -0.06
VTI1A-206ENST00000489142 GCNT1Q02742 428 aa14.67□□□□□ -0.06
VTI1A-206ENST00000489142 CNGA2Q16280 664 aa14.67□□□□□ -0.06
VTI1A-206ENST00000489142 TRIM65Q6PJ69 517 aa14.67□□□□□ -0.06
VTI1A-206ENST00000489142 FRMD1Q8N878 549 aa14.67□□□□□ -0.06
VTI1A-206ENST00000489142 SLC35F5Q8WV83 523 aa14.67□□□□□ -0.06
VTI1A-206ENST00000489142 HMGB4Q8WW32 186 aa14.67□□□□□ -0.06
VTI1A-206ENST00000489142 RLN3Q8WXF3 142 aa14.67□□□□□ -0.06
VTI1A-206ENST00000489142 KCTD13Q8WZ19 329 aa14.67□□□□□ -0.06
VTI1A-206ENST00000489142 XPO6Q96QU8 1125 aaKnown RBP14.67□□□□□ -0.06
VTI1A-206ENST00000489142 MIS12Q9H081 205 aa14.67□□□□□ -0.06
VTI1A-206ENST00000489142 MARK1Q9P0L2 795 aa14.67□□□□□ -0.06
VTI1A-206ENST00000489142 BCCIPQ9P287 314 aaKnown RBP eCLIP14.67□□□□□ -0.06
VTI1A-206ENST00000489142 WDR35Q9P2L0 1181 aa14.67□□□□□ -0.06
VTI1A-206ENST00000489142 GDF9O60383 454 aa14.66□□□□□ -0.06
VTI1A-206ENST00000489142 MTIF2P46199 727 aaKnown RBP14.66□□□□□ -0.06
VTI1A-206ENST00000489142 DGKGP49619 791 aa14.66□□□□□ -0.06
VTI1A-206ENST00000489142 LMNB2Q03252 620 aa14.66□□□□□ -0.06
VTI1A-206ENST00000489142 SF3A2Q15428 464 aaKnown RBP14.66□□□□□ -0.06
VTI1A-206ENST00000489142 TPD52L1Q16890 204 aaPredicted RBP14.66□□□□□ -0.06
VTI1A-206ENST00000489142 ARHGAP44Q17R89 818 aa14.66□□□□□ -0.06
VTI1A-206ENST00000489142 PLK5Q496M5 336 aa14.66□□□□□ -0.06
VTI1A-206ENST00000489142 EOGTQ5NDL2 527 aa14.66□□□□□ -0.06
VTI1A-206ENST00000489142 DENND1BQ6P3S1 775 aa14.66□□□□□ -0.06
VTI1A-206ENST00000489142 PRR23CQ6ZRP0 262 aa14.66□□□□□ -0.06
VTI1A-206ENST00000489142 RASSF3Q86WH2 238 aa14.66□□□□□ -0.06
VTI1A-206ENST00000489142 GPR161Q8N6U8 529 aaKnown RBP14.66□□□□□ -0.06
VTI1A-206ENST00000489142 MLKLQ8NB16 471 aa14.66□□□□□ -0.06
VTI1A-206ENST00000489142 RNF139Q8WU17 664 aa14.66□□□□□ -0.06
VTI1A-206ENST00000489142 NUP62CLQ9H1M0 184 aa14.66□□□□□ -0.06
VTI1A-206ENST00000489142 DUSP15Q9H1R2 295 aaPredicted RBP14.66□□□□□ -0.06
VTI1A-206ENST00000489142 AJAP1Q9UKB5 411 aaPredicted RBP14.66□□□□□ -0.06
VTI1A-206ENST00000489142 CLEC4EQ9ULY5 219 aa14.66□□□□□ -0.06
VTI1A-206ENST00000489142 RAD54BQ9Y620 910 aa14.66□□□□□ -0.06
VTI1A-206ENST00000489142 CEP192Q8TEP8 1941 aa14.65□□□□□ -0.06
VTI1A-206ENST00000489142 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.65□□□□□ -0.06
VTI1A-206ENST00000489142 TSPAN3O60637 253 aa14.65□□□□□ -0.06
VTI1A-206ENST00000489142 LETM1O95202 739 aaPredicted RBP14.65□□□□□ -0.06
VTI1A-206ENST00000489142 EPN2O95208 641 aa14.65□□□□□ -0.06
VTI1A-206ENST00000489142 CISD3P0C7P0 127 aa14.65□□□□□ -0.06
VTI1A-206ENST00000489142 USP8P40818 1118 aa14.65□□□□□ -0.06
VTI1A-206ENST00000489142 CSRP2Q16527 193 aa14.65□□□□□ -0.06
VTI1A-206ENST00000489142 FYB2Q5VWT5 728 aa14.65□□□□□ -0.06
VTI1A-206ENST00000489142 DGLUCYQ7Z3D6 616 aa14.65□□□□□ -0.06
VTI1A-206ENST00000489142 PGBD3Q8N328 593 aa14.65□□□□□ -0.06
VTI1A-206ENST00000489142 PLD4Q96BZ4 506 aa14.65□□□□□ -0.06
VTI1A-206ENST00000489142 DCLK3Q9C098 648 aa14.65□□□□□ -0.06
VTI1A-206ENST00000489142 CNGB3Q9NQW8 809 aa14.65□□□□□ -0.06
VTI1A-206ENST00000489142 ST7Q9NRC1 585 aa14.65□□□□□ -0.06
VTI1A-206ENST00000489142 CDV3Q9UKY7 258 aaKnown RBP14.65□□□□□ -0.06
VTI1A-206ENST00000489142 ZNF510Q9Y2H8 683 aa14.65□□□□□ -0.06
VTI1A-206ENST00000489142 BECN2A8MW95 431 aa14.64□□□□□ -0.07
VTI1A-206ENST00000489142 THAP12O43422 761 aa14.64□□□□□ -0.07
VTI1A-206ENST00000489142 ALDH1A2O94788 518 aa14.64□□□□□ -0.07
VTI1A-206ENST00000489142 PENKP01210 267 aaPredicted RBP14.64□□□□□ -0.07
VTI1A-206ENST00000489142 PNMA6AP0CW24 399 aaPredicted RBP14.64□□□□□ -0.07
VTI1A-206ENST00000489142 HOXB2P14652 356 aa14.64□□□□□ -0.07
VTI1A-206ENST00000489142 CREB5Q02930 508 aa14.64□□□□□ -0.07
VTI1A-206ENST00000489142 PUM1Q14671 1186 aaKnown RBP eCLIP14.64□□□□□ -0.07
VTI1A-206ENST00000489142 STILQ15468 1287 aa14.64□□□□□ -0.07
VTI1A-206ENST00000489142 TRIP4Q15650 581 aaPredicted RBP14.64□□□□□ -0.07
VTI1A-206ENST00000489142 HSF5Q4G112 596 aaPredicted RBP14.64□□□□□ -0.07
VTI1A-206ENST00000489142 PREPLQ4J6C6 727 aaPredicted RBP14.64□□□□□ -0.07
VTI1A-206ENST00000489142 USP39Q53GS9 565 aaKnown RBP14.64□□□□□ -0.07
VTI1A-206ENST00000489142 TCEAL6Q6IPX3 200 aa14.64□□□□□ -0.07
VTI1A-206ENST00000489142 KIAA1211LQ6NV74 962 aa14.64□□□□□ -0.07
VTI1A-206ENST00000489142 GBP6Q6ZN66 633 aa14.64□□□□□ -0.07
VTI1A-206ENST00000489142 SCUBE3Q8IX30 993 aa14.64□□□□□ -0.07
VTI1A-206ENST00000489142 CHPFQ8IZ52 775 aa14.64□□□□□ -0.07
VTI1A-206ENST00000489142 PIAS4Q8N2W9 510 aaPredicted RBP14.64□□□□□ -0.07
VTI1A-206ENST00000489142 DDI1Q8WTU0 396 aa14.64□□□□□ -0.07
VTI1A-206ENST00000489142 TCEAL3Q969E4 200 aa14.64□□□□□ -0.07
VTI1A-206ENST00000489142 ZC3H10Q96K80 434 aaKnown RBP14.64□□□□□ -0.07
VTI1A-206ENST00000489142 SLC6A17Q9H1V8 727 aa14.64□□□□□ -0.07
VTI1A-206ENST00000489142 POLMQ9NP87 494 aaPredicted RBP14.64□□□□□ -0.07
VTI1A-206ENST00000489142 RXFP3Q9NSD7 469 aa14.64□□□□□ -0.07
VTI1A-206ENST00000489142 ABCC13Q9NSE7 274 aa14.64□□□□□ -0.07
VTI1A-206ENST00000489142 OLA1Q9NTK5 396 aaKnown RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms