RNA–Protein interactions for RNA: ENST00000489130.2

SRRM1-216, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-216ENST00000489130 KIAA1468Q9P260 1216 aa13.16□□□□□ -0.3
SRRM1-216ENST00000489130 HCN2Q9UL51 889 aa13.16□□□□□ -0.3
SRRM1-216ENST00000489130 STRIP2Q9ULQ0 834 aa13.16□□□□□ -0.3
SRRM1-216ENST00000489130 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.16□□□□□ -0.3
SRRM1-216ENST00000489130 PCDHB4Q9Y5E5 795 aa13.16□□□□□ -0.3
SRRM1-216ENST00000489130 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.16□□□□□ -0.3
SRRM1-216ENST00000489130 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.15□□□□□ -0.3
SRRM1-216ENST00000489130 RNF225M0QZC1 329 aaPredicted RBP13.15□□□□□ -0.3
SRRM1-216ENST00000489130 RHOBTB1O94844 696 aa13.15□□□□□ -0.3
SRRM1-216ENST00000489130 FGFR1OPO95684 399 aaKnown RBP13.15□□□□□ -0.3
SRRM1-216ENST00000489130 PENKP01210 267 aaPredicted RBP13.15□□□□□ -0.3
SRRM1-216ENST00000489130 AFPP02771 609 aaKnown RBP13.15□□□□□ -0.3
SRRM1-216ENST00000489130 ZNF806P0C7X5 589 aa13.15□□□□□ -0.3
SRRM1-216ENST00000489130 CORO1AP31146 461 aaKnown RBP13.15□□□□□ -0.3
SRRM1-216ENST00000489130 CHKAP35790 457 aa13.15□□□□□ -0.3
SRRM1-216ENST00000489130 MPLP40238 635 aa13.15□□□□□ -0.3
SRRM1-216ENST00000489130 CNGA2Q16280 664 aa13.15□□□□□ -0.3
SRRM1-216ENST00000489130 FYB2Q5VWT5 728 aa13.15□□□□□ -0.3
SRRM1-216ENST00000489130 TOGARAM2Q6ZUX3 1019 aa13.15□□□□□ -0.3
SRRM1-216ENST00000489130 RRAGAQ7L523 313 aa13.15□□□□□ -0.3
SRRM1-216ENST00000489130 ARHGEF19Q8IW93 802 aa13.15□□□□□ -0.3
SRRM1-216ENST00000489130 SIX6OS1Q8N1H7 587 aa13.15□□□□□ -0.3
SRRM1-216ENST00000489130 RBBP8NLQ8NC74 664 aaPredicted RBP13.15□□□□□ -0.3
SRRM1-216ENST00000489130 SLC35F5Q8WV83 523 aa13.15□□□□□ -0.3
SRRM1-216ENST00000489130 NDRG1Q92597 394 aaKnown RBP13.15□□□□□ -0.3
SRRM1-216ENST00000489130 PLD4Q96BZ4 506 aa13.15□□□□□ -0.3
SRRM1-216ENST00000489130 IPO9Q96P70 1041 aaKnown RBP13.15□□□□□ -0.3
SRRM1-216ENST00000489130 CNGB3Q9NQW8 809 aa13.15□□□□□ -0.3
SRRM1-216ENST00000489130 OLA1Q9NTK5 396 aaKnown RBP13.15□□□□□ -0.3
SRRM1-216ENST00000489130 RWDD2AQ9UIY3 292 aa13.15□□□□□ -0.3
SRRM1-216ENST00000489130 FBXO10Q9UK96 956 aa13.15□□□□□ -0.3
SRRM1-216ENST00000489130 AGO1Q9UL18 857 aaKnown RBP13.15□□□□□ -0.3
SRRM1-216ENST00000489130 MYOFQ9NZM1 2061 aa13.15□□□□□ -0.3
SRRM1-216ENST00000489130 SLC12A8A0AV02 714 aa13.14□□□□□ -0.31
SRRM1-216ENST00000489130 YJEFN3A6XGL0 299 aa13.14□□□□□ -0.31
SRRM1-216ENST00000489130 PRRT4C9JH25 899 aa13.14□□□□□ -0.31
SRRM1-216ENST00000489130 E7ENQ6 273 aa13.14□□□□□ -0.31
SRRM1-216ENST00000489130 SLC30A4O14863 429 aa13.14□□□□□ -0.31
SRRM1-216ENST00000489130 GABBR2O75899 941 aa13.14□□□□□ -0.31
SRRM1-216ENST00000489130 HMBSP08397 361 aa13.14□□□□□ -0.31
SRRM1-216ENST00000489130 CISD3P0C7P0 127 aa13.14□□□□□ -0.31
SRRM1-216ENST00000489130 BRD2P25440 801 aaKnown RBP13.14□□□□□ -0.31
SRRM1-216ENST00000489130 NTSR1P30989 418 aa13.14□□□□□ -0.31
SRRM1-216ENST00000489130 DGKGP49619 791 aa13.14□□□□□ -0.31
SRRM1-216ENST00000489130 DAOAP59103 153 aa13.14□□□□□ -0.31
SRRM1-216ENST00000489130 TRIP4Q15650 581 aaPredicted RBP13.14□□□□□ -0.31
SRRM1-216ENST00000489130 CCDC6Q16204 474 aa13.14□□□□□ -0.31
SRRM1-216ENST00000489130 CAMK4Q16566 473 aa13.14□□□□□ -0.31
SRRM1-216ENST00000489130 BSPRYQ5W0U4 402 aa13.14□□□□□ -0.31
SRRM1-216ENST00000489130 EGFLAMQ63HQ2 1017 aa13.14□□□□□ -0.31
SRRM1-216ENST00000489130 PMS2CLQ68D20 193 aa13.14□□□□□ -0.31
SRRM1-216ENST00000489130 PMF1Q6P1K2 205 aa13.14□□□□□ -0.31
SRRM1-216ENST00000489130 DENND1CQ8IV53 801 aa13.14□□□□□ -0.31
SRRM1-216ENST00000489130 FMNL3Q8IVF7 1028 aa13.14□□□□□ -0.31
SRRM1-216ENST00000489130 FAM217AQ8IXS0 508 aa13.14□□□□□ -0.31
SRRM1-216ENST00000489130 CPXM2Q8N436 756 aa13.14□□□□□ -0.31
SRRM1-216ENST00000489130 KREMEN1Q96MU8 473 aa13.14□□□□□ -0.31
SRRM1-216ENST00000489130 MED15Q96RN5 788 aa13.14□□□□□ -0.31
SRRM1-216ENST00000489130 INTS2Q9H0H0 1204 aaKnown RBP13.14□□□□□ -0.31
SRRM1-216ENST00000489130 CD248Q9HCU0 757 aa13.14□□□□□ -0.31
SRRM1-216ENST00000489130 ABCC13Q9NSE7 274 aa13.14□□□□□ -0.31
SRRM1-216ENST00000489130 PLK2Q9NYY3 685 aa13.14□□□□□ -0.31
SRRM1-216ENST00000489130 CNTN6Q9UQ52 1028 aa13.14□□□□□ -0.31
SRRM1-216ENST00000489130 INVSQ9Y283 1065 aa13.14□□□□□ -0.31
SRRM1-216ENST00000489130 SLC27A6Q9Y2P4 619 aa13.14□□□□□ -0.31
SRRM1-216ENST00000489130 HBS1LQ9Y450 684 aaKnown RBP13.14□□□□□ -0.31
SRRM1-216ENST00000489130 TCRBV21S2A2A0A5A6 115 aa13.13□□□□□ -0.31
SRRM1-216ENST00000489130 MED19A0JLT2 244 aaPredicted RBP13.13□□□□□ -0.31
SRRM1-216ENST00000489130 BCLAF3A2AJT9 711 aaKnown RBP13.13□□□□□ -0.31
SRRM1-216ENST00000489130 M0QYV0 167 aa13.13□□□□□ -0.31
SRRM1-216ENST00000489130 GDF9O60383 454 aa13.13□□□□□ -0.31
SRRM1-216ENST00000489130 LCP1P13796 627 aa13.13□□□□□ -0.31
SRRM1-216ENST00000489130 HOXB2P14652 356 aa13.13□□□□□ -0.31
SRRM1-216ENST00000489130 BCKDHBP21953 392 aa13.13□□□□□ -0.31
SRRM1-216ENST00000489130 GBP1P32455 592 aa13.13□□□□□ -0.31
SRRM1-216ENST00000489130 P2RY2P41231 377 aa13.13□□□□□ -0.31
SRRM1-216ENST00000489130 LIMK1P53667 647 aa13.13□□□□□ -0.31
SRRM1-216ENST00000489130 MFAP3P55082 362 aa13.13□□□□□ -0.31
SRRM1-216ENST00000489130 SF3A2Q15428 464 aaKnown RBP13.13□□□□□ -0.31
SRRM1-216ENST00000489130 AASDHQ4L235 1098 aaPredicted RBP13.13□□□□□ -0.31
SRRM1-216ENST00000489130 C12orf50Q8NA57 414 aaPredicted RBP13.13□□□□□ -0.31
SRRM1-216ENST00000489130 RNF139Q8WU17 664 aa13.13□□□□□ -0.31
SRRM1-216ENST00000489130 HMGB4Q8WW32 186 aa13.13□□□□□ -0.31
SRRM1-216ENST00000489130 IRGQQ8WZA9 623 aa13.13□□□□□ -0.31
SRRM1-216ENST00000489130 EDEM1Q92611 657 aa13.13□□□□□ -0.31
SRRM1-216ENST00000489130 BHMTQ93088 406 aa13.13□□□□□ -0.31
SRRM1-216ENST00000489130 SPACA7Q96KW9 195 aa13.13□□□□□ -0.31
SRRM1-216ENST00000489130 HSFY1Q96LI6 401 aa13.13□□□□□ -0.31
SRRM1-216ENST00000489130 GABRG3Q99928 467 aa13.13□□□□□ -0.31
SRRM1-216ENST00000489130 VPS45Q9NRW7 570 aa13.13□□□□□ -0.31
SRRM1-216ENST00000489130 BCCIPQ9P287 314 aaKnown RBP eCLIP13.13□□□□□ -0.31
SRRM1-216ENST00000489130 A0A1W2PQF6 199 aa13.12□□□□□ -0.31
SRRM1-216ENST00000489130 CALCAP01258 141 aa13.12□□□□□ -0.31
SRRM1-216ENST00000489130 GABRG2P18507 467 aa13.12□□□□□ -0.31
SRRM1-216ENST00000489130 HARS2P49590 506 aaKnown RBP13.12□□□□□ -0.31
SRRM1-216ENST00000489130 RGS7P49802 495 aa13.12□□□□□ -0.31
SRRM1-216ENST00000489130 CREB5Q02930 508 aa13.12□□□□□ -0.31
SRRM1-216ENST00000489130 BYSLQ13895 437 aaKnown RBP13.12□□□□□ -0.31
SRRM1-216ENST00000489130 MAP7D1Q3KQU3 841 aa13.12□□□□□ -0.31
SRRM1-216ENST00000489130 MSANTD2Q6P1R3 559 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms