RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 WDR26Q9H7D7 661 aa5.08□□□□□ -1.6
ITGB1-214ENST00000488427 NECTIN3Q9NQS3 549 aa5.08□□□□□ -1.6
ITGB1-214ENST00000488427 ADARB2Q9NS39 739 aaKnown RBP5.08□□□□□ -1.6
ITGB1-214ENST00000488427 RIMKLBQ9ULI2 386 aa5.08□□□□□ -1.6
ITGB1-214ENST00000488427 TNFRSF18Q9Y5U5 241 aa5.08□□□□□ -1.6
ITGB1-214ENST00000488427 XIRP1Q702N8 1843 aaKnown RBP5.08□□□□□ -1.6
ITGB1-214ENST00000488427 BIVM-ERCC5R4GMW8 1640 aa5.08□□□□□ -1.6
ITGB1-214ENST00000488427 CDK13Q14004 1512 aaKnown RBP5.07□□□□□ -1.6
ITGB1-214ENST00000488427 DISP1Q96F81 1524 aa5.07□□□□□ -1.6
ITGB1-214ENST00000488427 COL15A1P39059 1388 aa5.07□□□□□ -1.6
ITGB1-214ENST00000488427 TMEM232C9JQI7 657 aa5.07□□□□□ -1.6
ITGB1-214ENST00000488427 MASP2O00187 686 aa5.07□□□□□ -1.6
ITGB1-214ENST00000488427 USP12O75317 370 aa5.07□□□□□ -1.6
ITGB1-214ENST00000488427 C1QL1O75973 258 aa5.07□□□□□ -1.6
ITGB1-214ENST00000488427 VNN1O95497 513 aa5.07□□□□□ -1.6
ITGB1-214ENST00000488427 VIPP01282 170 aa5.07□□□□□ -1.6
ITGB1-214ENST00000488427 MMP8P22894 467 aa5.07□□□□□ -1.6
ITGB1-214ENST00000488427 PTH2RP49190 550 aa5.07□□□□□ -1.6
ITGB1-214ENST00000488427 TUBA4AP68366 448 aa5.07□□□□□ -1.6
ITGB1-214ENST00000488427 CYP4F2P78329 520 aa5.07□□□□□ -1.6
ITGB1-214ENST00000488427 OS9Q13438 667 aaPredicted RBP5.07□□□□□ -1.6
ITGB1-214ENST00000488427 SLC5A9Q2M3M2 681 aa5.07□□□□□ -1.6
ITGB1-214ENST00000488427 KLHDC7AQ5VTJ3 777 aa5.07□□□□□ -1.6
ITGB1-214ENST00000488427 RRAGBQ5VZM2 374 aa5.07□□□□□ -1.6
ITGB1-214ENST00000488427 HIBCHQ6NVY1 386 aaPredicted RBP5.07□□□□□ -1.6
ITGB1-214ENST00000488427 TMEM65Q6PI78 240 aa5.07□□□□□ -1.6
ITGB1-214ENST00000488427 CRTC1Q6UUV9 634 aa5.07□□□□□ -1.6
ITGB1-214ENST00000488427 SRLQ86TD4 932 aa5.07□□□□□ -1.6
ITGB1-214ENST00000488427 FAM71DQ8N9W8 422 aa5.07□□□□□ -1.6
ITGB1-214ENST00000488427 CYP2W1Q8TAV3 490 aa5.07□□□□□ -1.6
ITGB1-214ENST00000488427 ASB2Q96Q27 587 aa5.07□□□□□ -1.6
ITGB1-214ENST00000488427 NUDT22Q9BRQ3 303 aa5.07□□□□□ -1.6
ITGB1-214ENST00000488427 HELLSQ9NRZ9 838 aa5.07□□□□□ -1.6
ITGB1-214ENST00000488427 VPS51Q9UID3 782 aa5.07□□□□□ -1.6
ITGB1-214ENST00000488427 LRCH1Q9Y2L9 728 aa5.07□□□□□ -1.6
ITGB1-214ENST00000488427 SLC27A6Q9Y2P4 619 aa5.07□□□□□ -1.6
ITGB1-214ENST00000488427 ATP10AO60312 1499 aa5.07□□□□□ -1.6
ITGB1-214ENST00000488427 RGS12O14924 1447 aa5.06□□□□□ -1.6
ITGB1-214ENST00000488427 NPATQ14207 1427 aa5.06□□□□□ -1.6
ITGB1-214ENST00000488427 LRRC3CA6NJW4 275 aa5.06□□□□□ -1.6
ITGB1-214ENST00000488427 SMIM22K7EJ46 135 aa5.06□□□□□ -1.6
ITGB1-214ENST00000488427 ZNF213O14771 459 aa5.06□□□□□ -1.6
ITGB1-214ENST00000488427 WDR47O94967 919 aa5.06□□□□□ -1.6
ITGB1-214ENST00000488427 GLP2RO95838 553 aa5.06□□□□□ -1.6
ITGB1-214ENST00000488427 MT-CO3P00414 261 aa5.06□□□□□ -1.6
ITGB1-214ENST00000488427 SLC3A2P08195 630 aaKnown RBP5.06□□□□□ -1.6
ITGB1-214ENST00000488427 EGR1P18146 543 aa5.06□□□□□ -1.6
ITGB1-214ENST00000488427 EEF1GP26641 437 aaKnown RBP5.06□□□□□ -1.6
ITGB1-214ENST00000488427 NEK3P51956 506 aa5.06□□□□□ -1.6
ITGB1-214ENST00000488427 PMS2P11Q13670 270 aa5.06□□□□□ -1.6
ITGB1-214ENST00000488427 MAPKAPK3Q16644 382 aa5.06□□□□□ -1.6
ITGB1-214ENST00000488427 MEX3CQ5U5Q3 659 aaKnown RBP5.06□□□□□ -1.6
ITGB1-214ENST00000488427 PRAMEF17Q5VTA0 474 aa5.06□□□□□ -1.6
ITGB1-214ENST00000488427 DPY19L3Q6ZPD9 716 aa5.06□□□□□ -1.6
ITGB1-214ENST00000488427 OVCA2Q8WZ82 227 aa5.06□□□□□ -1.6
ITGB1-214ENST00000488427 HIC2Q96JB3 615 aa5.06□□□□□ -1.6
ITGB1-214ENST00000488427 LENG8Q96PV6 779 aaPredicted RBP5.06□□□□□ -1.6
ITGB1-214ENST00000488427 MMS19Q96T76 1030 aa5.06□□□□□ -1.6
ITGB1-214ENST00000488427 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.06□□□□□ -1.6
ITGB1-214ENST00000488427 FLRT1Q9NZU1 646 aa5.06□□□□□ -1.6
ITGB1-214ENST00000488427 ADAM21Q9UKJ8 722 aa5.06□□□□□ -1.6
ITGB1-214ENST00000488427 MAN2B2Q9Y2E5 1009 aa5.06□□□□□ -1.6
ITGB1-214ENST00000488427 EP400Q96L91 3159 aa5.06□□□□□ -1.6
ITGB1-214ENST00000488427 NEURL4Q96JN8 1562 aa5.06□□□□□ -1.6
ITGB1-214ENST00000488427 CCDC194A0A1B0GVG4 234 aa5.05□□□□□ -1.6
ITGB1-214ENST00000488427 TTC34A8MYJ7 566 aa5.05□□□□□ -1.6
ITGB1-214ENST00000488427 PODXLO00592 558 aa5.05□□□□□ -1.6
ITGB1-214ENST00000488427 ZSCAN9O15535 394 aaPredicted RBP5.05□□□□□ -1.6
ITGB1-214ENST00000488427 HARSP12081 509 aaKnown RBP5.05□□□□□ -1.6
ITGB1-214ENST00000488427 MATN1P21941 496 aa5.05□□□□□ -1.6
ITGB1-214ENST00000488427 TECP42680 631 aa5.05□□□□□ -1.6
ITGB1-214ENST00000488427 GSTM5P46439 218 aa5.05□□□□□ -1.6
ITGB1-214ENST00000488427 DIO1P49895 249 aa5.05□□□□□ -1.6
ITGB1-214ENST00000488427 RENBPP51606 427 aa5.05□□□□□ -1.6
ITGB1-214ENST00000488427 ALDH5A1P51649 535 aaPredicted RBP5.05□□□□□ -1.6
ITGB1-214ENST00000488427 COPB1P53618 953 aaKnown RBP5.05□□□□□ -1.6
ITGB1-214ENST00000488427 C21orf58P58505 322 aa5.05□□□□□ -1.6
ITGB1-214ENST00000488427 CCDC15Q0P6D6 951 aa5.05□□□□□ -1.6
ITGB1-214ENST00000488427 LMAN2Q12907 356 aa5.05□□□□□ -1.6
ITGB1-214ENST00000488427 ATP1A4Q13733 1029 aa5.05□□□□□ -1.6
ITGB1-214ENST00000488427 CBFBQ13951 182 aa5.05□□□□□ -1.6
ITGB1-214ENST00000488427 FAM187BQ17R55 369 aa5.05□□□□□ -1.6
ITGB1-214ENST00000488427 MAP9Q49MG5 647 aa5.05□□□□□ -1.6
ITGB1-214ENST00000488427 USP49Q70CQ1 688 aa5.05□□□□□ -1.6
ITGB1-214ENST00000488427 CCDC28AQ8IWP9 274 aa5.05□□□□□ -1.6
ITGB1-214ENST00000488427 SYTL1Q8IYJ3 562 aa5.05□□□□□ -1.6
ITGB1-214ENST00000488427 C12orf76Q8N812 135 aaPredicted RBP5.05□□□□□ -1.6
ITGB1-214ENST00000488427 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.05□□□□□ -1.6
ITGB1-214ENST00000488427 C11orf44Q8N8P7 122 aa5.05□□□□□ -1.6
ITGB1-214ENST00000488427 PNLDC1Q8NA58 520 aaKnown RBP5.05□□□□□ -1.6
ITGB1-214ENST00000488427 PARD3BQ8TEW8 1205 aa5.05□□□□□ -1.6
ITGB1-214ENST00000488427 RNF26Q9BY78 433 aaPredicted RBP5.05□□□□□ -1.6
ITGB1-214ENST00000488427 PCDHAC1Q9H158 963 aa5.05□□□□□ -1.6
ITGB1-214ENST00000488427 PRDM13Q9H4Q3 707 aa5.05□□□□□ -1.6
ITGB1-214ENST00000488427 NRIP3Q9NQ35 241 aa5.05□□□□□ -1.6
ITGB1-214ENST00000488427 GAR1Q9NY12 217 aaKnown RBP5.05□□□□□ -1.6
ITGB1-214ENST00000488427 RGL1Q9NZL6 768 aa5.05□□□□□ -1.6
ITGB1-214ENST00000488427 NFU1Q9UMS0 254 aa5.05□□□□□ -1.6
ITGB1-214ENST00000488427 COL11A2P13942 1736 aaPredicted RBP5.04□□□□□ -1.6
ITGB1-214ENST00000488427 MANSC4A6NHS7 340 aaPredicted RBP5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms