RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 DDR2Q16832 855 aa9.81□□□□□ -0.84
SF3B1-211ENST00000487698 RHBDF2Q6PJF5 856 aa9.81□□□□□ -0.84
SF3B1-211ENST00000487698 PRSS55Q6UWB4 352 aaPredicted RBP9.81□□□□□ -0.84
SF3B1-211ENST00000487698 RNF19BQ6ZMZ0 732 aa9.81□□□□□ -0.84
SF3B1-211ENST00000487698 TMC3Q7Z5M5 1100 aa9.81□□□□□ -0.84
SF3B1-211ENST00000487698 TAC4Q86UU9 113 aa9.81□□□□□ -0.84
SF3B1-211ENST00000487698 PYROXD2Q8N2H3 581 aa9.81□□□□□ -0.84
SF3B1-211ENST00000487698 CCDC89Q8N998 374 aa9.81□□□□□ -0.84
SF3B1-211ENST00000487698 GLIS1Q8NBF1 620 aa9.81□□□□□ -0.84
SF3B1-211ENST00000487698 ADAM32Q8TC27 787 aa9.81□□□□□ -0.84
SF3B1-211ENST00000487698 DQX1Q8TE96 717 aaKnown RBP9.81□□□□□ -0.84
SF3B1-211ENST00000487698 SNF8Q96H20 258 aa9.81□□□□□ -0.84
SF3B1-211ENST00000487698 CSPG4P5Q96PW8 444 aa9.81□□□□□ -0.84
SF3B1-211ENST00000487698 FMO2Q99518 471 aa9.81□□□□□ -0.84
SF3B1-211ENST00000487698 MAK16Q9BXY0 300 aaKnown RBP9.81□□□□□ -0.84
SF3B1-211ENST00000487698 IL23AQ9NPF7 189 aa9.81□□□□□ -0.84
SF3B1-211ENST00000487698 ANLNQ9NQW6 1124 aa9.81□□□□□ -0.84
SF3B1-211ENST00000487698 TMPRSS4Q9NRS4 437 aa9.81□□□□□ -0.84
SF3B1-211ENST00000487698 CWC15Q9P013 229 aaKnown RBP9.81□□□□□ -0.84
SF3B1-211ENST00000487698 PCDH10Q9P2E7 1040 aa9.81□□□□□ -0.84
SF3B1-211ENST00000487698 ASIC3Q9UHC3 531 aa9.81□□□□□ -0.84
SF3B1-211ENST00000487698 SCML2Q9UQR0 700 aa9.81□□□□□ -0.84
SF3B1-211ENST00000487698 ZNF148Q9UQR1 794 aa9.81□□□□□ -0.84
SF3B1-211ENST00000487698 BACE2Q9Y5Z0 518 aa9.81□□□□□ -0.84
SF3B1-211ENST00000487698 MRPL42Q9Y6G3 142 aaKnown RBP9.81□□□□□ -0.84
SF3B1-211ENST00000487698 APOL1O14791 398 aa9.8□□□□□ -0.84
SF3B1-211ENST00000487698 KRT14P02533 472 aa9.8□□□□□ -0.84
SF3B1-211ENST00000487698 SOD2P04179 222 aa9.8□□□□□ -0.84
SF3B1-211ENST00000487698 ATF2P15336 505 aa9.8□□□□□ -0.84
SF3B1-211ENST00000487698 ITIH2P19823 946 aa9.8□□□□□ -0.84
SF3B1-211ENST00000487698 ADRA1BP35368 520 aa9.8□□□□□ -0.84
SF3B1-211ENST00000487698 PGFP49763 221 aa9.8□□□□□ -0.84
SF3B1-211ENST00000487698 PLTPP55058 493 aa9.8□□□□□ -0.84
SF3B1-211ENST00000487698 SEMA3BQ13214 749 aa9.8□□□□□ -0.84
SF3B1-211ENST00000487698 TRIP13Q15645 432 aaPredicted RBP9.8□□□□□ -0.84
SF3B1-211ENST00000487698 SDHAF4Q5VUM1 108 aa9.8□□□□□ -0.84
SF3B1-211ENST00000487698 NPNTQ6UXI9 565 aa9.8□□□□□ -0.84
SF3B1-211ENST00000487698 ZNF365Q70YC5 407 aa9.8□□□□□ -0.84
SF3B1-211ENST00000487698 C16orf59Q7L2K0 433 aa9.8□□□□□ -0.84
SF3B1-211ENST00000487698 NUP93Q8N1F7 819 aa9.8□□□□□ -0.84
SF3B1-211ENST00000487698 CCHCR1Q8TD31 782 aa9.8□□□□□ -0.84
SF3B1-211ENST00000487698 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.8□□□□□ -0.84
SF3B1-211ENST00000487698 SPATA17Q96L03 361 aa9.8□□□□□ -0.84
SF3B1-211ENST00000487698 ZNF558Q96NG5 402 aa9.8□□□□□ -0.84
SF3B1-211ENST00000487698 TMEM121Q9BTD3 319 aa9.8□□□□□ -0.84
SF3B1-211ENST00000487698 SMOC2Q9H3U7 446 aa9.8□□□□□ -0.84
SF3B1-211ENST00000487698 FBXO44Q9H4M3 255 aa9.8□□□□□ -0.84
SF3B1-211ENST00000487698 FAM204AQ9H8W3 233 aa9.8□□□□□ -0.84
SF3B1-211ENST00000487698 PCDH9Q9HC56 1237 aa9.8□□□□□ -0.84
SF3B1-211ENST00000487698 ABCC13Q9NSE7 274 aa9.8□□□□□ -0.84
SF3B1-211ENST00000487698 DDIT4Q9NX09 232 aa9.8□□□□□ -0.84
SF3B1-211ENST00000487698 FBXW11Q9UKB1 542 aa9.8□□□□□ -0.84
SF3B1-211ENST00000487698 CDY1Q9Y6F8 540 aa9.8□□□□□ -0.84
SF3B1-211ENST00000487698 SYNJ2BP-COX16A0A087WUM0 186 aa9.8□□□□□ -0.84
SF3B1-211ENST00000487698 WDR27A2RRH5 827 aa9.8□□□□□ -0.84
SF3B1-211ENST00000487698 MCF2LO15068 1137 aa9.8□□□□□ -0.84
SF3B1-211ENST00000487698 ADAM12O43184 909 aa9.8□□□□□ -0.84
SF3B1-211ENST00000487698 PPFIA2O75334 1257 aa9.8□□□□□ -0.84
SF3B1-211ENST00000487698 HAPLN1P10915 354 aaPredicted RBP9.8□□□□□ -0.84
SF3B1-211ENST00000487698 GOT1P17174 413 aa9.8□□□□□ -0.84
SF3B1-211ENST00000487698 LAG3P18627 525 aa9.8□□□□□ -0.84
SF3B1-211ENST00000487698 GDF10P55107 478 aa9.8□□□□□ -0.84
SF3B1-211ENST00000487698 ARPP19P56211 112 aa9.8□□□□□ -0.84
SF3B1-211ENST00000487698 EIF3EP60228 445 aaKnown RBP9.8□□□□□ -0.84
SF3B1-211ENST00000487698 USP46P62068 366 aa9.8□□□□□ -0.84
SF3B1-211ENST00000487698 ROR1Q01973 937 aa9.8□□□□□ -0.84
SF3B1-211ENST00000487698 CALCOCO2Q13137 446 aa9.8□□□□□ -0.84
SF3B1-211ENST00000487698 BTG3Q14201 252 aaPredicted RBP9.8□□□□□ -0.84
SF3B1-211ENST00000487698 UAP1Q16222 522 aaPredicted RBP9.8□□□□□ -0.84
SF3B1-211ENST00000487698 PSMD5Q16401 504 aa9.8□□□□□ -0.84
SF3B1-211ENST00000487698 EFHC2Q5JST6 749 aa9.8□□□□□ -0.84
SF3B1-211ENST00000487698 FAM117BQ6P1L5 589 aa9.8□□□□□ -0.84
SF3B1-211ENST00000487698 GSTA5Q7RTV2 222 aa9.8□□□□□ -0.84
SF3B1-211ENST00000487698 PRUNE1Q86TP1 453 aa9.8□□□□□ -0.84
SF3B1-211ENST00000487698 KRT222Q8N1A0 295 aa9.8□□□□□ -0.84
SF3B1-211ENST00000487698 COLGALT1Q8NBJ5 622 aa9.8□□□□□ -0.84
SF3B1-211ENST00000487698 STKLD1Q8NE28 680 aa9.8□□□□□ -0.84
SF3B1-211ENST00000487698 FBXO22Q8NEZ5 403 aa9.8□□□□□ -0.84
SF3B1-211ENST00000487698 RNF139Q8WU17 664 aa9.8□□□□□ -0.84
SF3B1-211ENST00000487698 RIN2Q8WYP3 895 aaPredicted RBP9.8□□□□□ -0.84
SF3B1-211ENST00000487698 P3H4Q92791 437 aa9.8□□□□□ -0.84
SF3B1-211ENST00000487698 HERC2P3Q9BVR0 1158 aa9.8□□□□□ -0.84
SF3B1-211ENST00000487698 PRDM16Q9HAZ2 1276 aa9.8□□□□□ -0.84
SF3B1-211ENST00000487698 NMUR1Q9HB89 426 aa9.8□□□□□ -0.84
SF3B1-211ENST00000487698 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.8□□□□□ -0.84
SF3B1-211ENST00000487698 COX16Q9P0S2 106 aa9.8□□□□□ -0.84
SF3B1-211ENST00000487698 PLXNA4Q9HCM2 1894 aa9.8□□□□□ -0.84
SF3B1-211ENST00000487698 CARNS1A5YM72 827 aa9.79□□□□□ -0.84
SF3B1-211ENST00000487698 AGPSO00116 658 aa9.79□□□□□ -0.84
SF3B1-211ENST00000487698 IRAK2O43187 625 aa9.79□□□□□ -0.84
SF3B1-211ENST00000487698 SOAT2O75908 522 aa9.79□□□□□ -0.84
SF3B1-211ENST00000487698 RBP3P10745 1247 aa9.79□□□□□ -0.84
SF3B1-211ENST00000487698 ZFXP17010 805 aaPredicted RBP9.79□□□□□ -0.84
SF3B1-211ENST00000487698 ADCY8P40145 1251 aa9.79□□□□□ -0.84
SF3B1-211ENST00000487698 DSG1Q02413 1049 aa9.79□□□□□ -0.84
SF3B1-211ENST00000487698 IFRD2Q12894 506 aaPredicted RBP9.79□□□□□ -0.84
SF3B1-211ENST00000487698 DPYSQ14117 519 aa9.79□□□□□ -0.84
SF3B1-211ENST00000487698 BTBD8Q5XKL5 378 aa9.79□□□□□ -0.84
SF3B1-211ENST00000487698 NCBP2-AS2Q69YL0 99 aa9.79□□□□□ -0.84
SF3B1-211ENST00000487698 MSANTD2Q6P1R3 559 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms