RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 DEPDC7Q96QD5 511 aa12.39□□□□□ -0.43
TRIM56-204ENST00000487252 BBS2Q9BXC9 721 aa12.39□□□□□ -0.43
TRIM56-204ENST00000487252 SLC25A18Q9H1K4 315 aa12.39□□□□□ -0.43
TRIM56-204ENST00000487252 ATXN7L1Q9ULK2 861 aaPredicted RBP12.39□□□□□ -0.43
TRIM56-204ENST00000487252 SLC27A6Q9Y2P4 619 aa12.39□□□□□ -0.43
TRIM56-204ENST00000487252 MYH11P35749 1972 aa12.38□□□□□ -0.43
TRIM56-204ENST00000487252 A0A1W2PPC4 97 aa12.38□□□□□ -0.43
TRIM56-204ENST00000487252 CPLX1O14810 134 aa12.38□□□□□ -0.43
TRIM56-204ENST00000487252 HCRTO43612 131 aa12.38□□□□□ -0.43
TRIM56-204ENST00000487252 OPA1O60313 960 aa12.38□□□□□ -0.43
TRIM56-204ENST00000487252 SYNCRIPO60506 623 aaKnown RBP12.38□□□□□ -0.43
TRIM56-204ENST00000487252 ELAVL4P26378 380 aaKnown RBP12.38□□□□□ -0.43
TRIM56-204ENST00000487252 ARRB1P49407 418 aaPredicted RBP12.38□□□□□ -0.43
TRIM56-204ENST00000487252 SGO2Q562F6 1265 aa12.38□□□□□ -0.43
TRIM56-204ENST00000487252 SNX30Q5VWJ9 437 aa12.38□□□□□ -0.43
TRIM56-204ENST00000487252 BLOC1S2Q6QNY1 142 aa12.38□□□□□ -0.43
TRIM56-204ENST00000487252 HTR3DQ70Z44 454 aa12.38□□□□□ -0.43
TRIM56-204ENST00000487252 TICAM1Q8IUC6 712 aa12.38□□□□□ -0.43
TRIM56-204ENST00000487252 SGF29Q96ES7 293 aa12.38□□□□□ -0.43
TRIM56-204ENST00000487252 P2RY11Q96G91 374 aa12.38□□□□□ -0.43
TRIM56-204ENST00000487252 ARHGAP9Q9BRR9 750 aa12.38□□□□□ -0.43
TRIM56-204ENST00000487252 RUSC1Q9BVN2 902 aa12.38□□□□□ -0.43
TRIM56-204ENST00000487252 ERVMER34-1Q9H9K5 563 aa12.38□□□□□ -0.43
TRIM56-204ENST00000487252 KCNG1Q9UIX4 513 aa12.38□□□□□ -0.43
TRIM56-204ENST00000487252 SH3BP1Q9Y3L3 701 aa12.38□□□□□ -0.43
TRIM56-204ENST00000487252 A0A1W2PR77 199 aa12.37□□□□□ -0.43
TRIM56-204ENST00000487252 SFI1A8K8P3 1242 aa12.37□□□□□ -0.43
TRIM56-204ENST00000487252 CSO75390 466 aaKnown RBP12.37□□□□□ -0.43
TRIM56-204ENST00000487252 FSBPO95073 299 aa12.37□□□□□ -0.43
TRIM56-204ENST00000487252 PIGRP01833 764 aa12.37□□□□□ -0.43
TRIM56-204ENST00000487252 BDNFP23560 247 aa12.37□□□□□ -0.43
TRIM56-204ENST00000487252 PRKCHP24723 683 aa12.37□□□□□ -0.43
TRIM56-204ENST00000487252 PNPLA4P41247 253 aa12.37□□□□□ -0.43
TRIM56-204ENST00000487252 MATR3P43243 847 aaKnown RBP eCLIP12.37□□□□□ -0.43
TRIM56-204ENST00000487252 CAMK2GQ13555 558 aaPredicted RBP12.37□□□□□ -0.43
TRIM56-204ENST00000487252 TOB2Q14106 344 aaPredicted RBP12.37□□□□□ -0.43
TRIM56-204ENST00000487252 RINT1Q6NUQ1 792 aa12.37□□□□□ -0.43
TRIM56-204ENST00000487252 C4orf50Q6ZRC1 276 aa12.37□□□□□ -0.43
TRIM56-204ENST00000487252 CLEC14AQ86T13 490 aa12.37□□□□□ -0.43
TRIM56-204ENST00000487252 CACUL1Q86Y37 369 aa12.37□□□□□ -0.43
TRIM56-204ENST00000487252 OR2T3Q8NH03 318 aa12.37□□□□□ -0.43
TRIM56-204ENST00000487252 SKA1Q96BD8 255 aa12.37□□□□□ -0.43
TRIM56-204ENST00000487252 FAM212AQ96EL1 285 aa12.37□□□□□ -0.43
TRIM56-204ENST00000487252 C8orf48Q96LL4 319 aa12.37□□□□□ -0.43
TRIM56-204ENST00000487252 ZNF560Q96MR9 790 aa12.37□□□□□ -0.43
TRIM56-204ENST00000487252 JAKMIP1Q96N16 626 aaKnown RBP12.37□□□□□ -0.43
TRIM56-204ENST00000487252 SLC6A18Q96N87 628 aa12.37□□□□□ -0.43
TRIM56-204ENST00000487252 BTBD1Q9H0C5 482 aa12.37□□□□□ -0.43
TRIM56-204ENST00000487252 EBF2Q9HAK2 575 aa12.37□□□□□ -0.43
TRIM56-204ENST00000487252 GEMIN8Q9NWZ8 242 aaKnown RBP12.37□□□□□ -0.43
TRIM56-204ENST00000487252 GDAP2Q9NXN4 497 aa12.37□□□□□ -0.43
TRIM56-204ENST00000487252 MAGEC2Q9UBF1 373 aaPredicted RBP12.37□□□□□ -0.43
TRIM56-204ENST00000487252 PCDHGA8Q9Y5G5 932 aa12.37□□□□□ -0.43
TRIM56-204ENST00000487252 SNX14Q9Y5W7 946 aa12.37□□□□□ -0.43
TRIM56-204ENST00000487252 SPENQ96T58 3664 aaKnown RBP12.36□□□□□ -0.43
TRIM56-204ENST00000487252 TRIM38O00635 465 aa12.36□□□□□ -0.43
TRIM56-204ENST00000487252 ATP2C2O75185 946 aa12.36□□□□□ -0.43
TRIM56-204ENST00000487252 ABL1P00519 1130 aa12.36□□□□□ -0.43
TRIM56-204ENST00000487252 PLS3P13797 630 aa12.36□□□□□ -0.43
TRIM56-204ENST00000487252 XBP1P17861 261 aa12.36□□□□□ -0.43
TRIM56-204ENST00000487252 PCSK1P29120 753 aa12.36□□□□□ -0.43
TRIM56-204ENST00000487252 LHX1P48742 406 aa12.36□□□□□ -0.43
TRIM56-204ENST00000487252 TUBP50607 506 aa12.36□□□□□ -0.43
TRIM56-204ENST00000487252 DUSP3P51452 185 aaPredicted RBP12.36□□□□□ -0.43
TRIM56-204ENST00000487252 ZNF211Q13398 564 aaPredicted RBP12.36□□□□□ -0.43
TRIM56-204ENST00000487252 ZNF234Q14588 700 aa12.36□□□□□ -0.43
TRIM56-204ENST00000487252 ZSCAN23Q3MJ62 389 aa12.36□□□□□ -0.43
TRIM56-204ENST00000487252 HAUS3Q68CZ6 603 aa12.36□□□□□ -0.43
TRIM56-204ENST00000487252 LIMS2Q7Z4I7 341 aa12.36□□□□□ -0.43
TRIM56-204ENST00000487252 ZNF564Q8TBZ8 553 aaPredicted RBP12.36□□□□□ -0.43
TRIM56-204ENST00000487252 OVCA2Q8WZ82 227 aa12.36□□□□□ -0.43
TRIM56-204ENST00000487252 ZNF274Q96GC6 653 aaPredicted RBP12.36□□□□□ -0.43
TRIM56-204ENST00000487252 SLITRK1Q96PX8 696 aa12.36□□□□□ -0.43
TRIM56-204ENST00000487252 TIPINQ9BVW5 301 aa12.36□□□□□ -0.43
TRIM56-204ENST00000487252 LHX5Q9H2C1 402 aa12.36□□□□□ -0.43
TRIM56-204ENST00000487252 SGK2Q9HBY8 427 aa12.36□□□□□ -0.43
TRIM56-204ENST00000487252 CRTAC1Q9NQ79 661 aa12.36□□□□□ -0.43
TRIM56-204ENST00000487252 GDF3Q9NR23 364 aa12.36□□□□□ -0.43
TRIM56-204ENST00000487252 SATB2Q9UPW6 733 aa12.36□□□□□ -0.43
TRIM56-204ENST00000487252 KIAA1024Q9UPX6 916 aa12.36□□□□□ -0.43
TRIM56-204ENST00000487252 FBN3Q75N90 2809 aa12.36□□□□□ -0.43
TRIM56-204ENST00000487252 PTPRJQ12913 1337 aa12.36□□□□□ -0.43
TRIM56-204ENST00000487252 SIGLEC6O43699 453 aa12.35□□□□□ -0.43
TRIM56-204ENST00000487252 HUS1O60921 280 aa12.35□□□□□ -0.43
TRIM56-204ENST00000487252 PTMSP20962 102 aa12.35□□□□□ -0.43
TRIM56-204ENST00000487252 GUCY2CP25092 1073 aa12.35□□□□□ -0.43
TRIM56-204ENST00000487252 RBMS1P29558 406 aaKnown RBP12.35□□□□□ -0.43
TRIM56-204ENST00000487252 KRT2P35908 639 aa12.35□□□□□ -0.43
TRIM56-204ENST00000487252 CASRP41180 1078 aa12.35□□□□□ -0.43
TRIM56-204ENST00000487252 MLLT3P42568 568 aaPredicted RBP12.35□□□□□ -0.43
TRIM56-204ENST00000487252 FOSBP53539 338 aa12.35□□□□□ -0.43
TRIM56-204ENST00000487252 SMTNP53814 917 aa12.35□□□□□ -0.43
TRIM56-204ENST00000487252 MFAP3P55082 362 aa12.35□□□□□ -0.43
TRIM56-204ENST00000487252 CDH8P55286 799 aa12.35□□□□□ -0.43
TRIM56-204ENST00000487252 NXPH1P58417 271 aa12.35□□□□□ -0.43
TRIM56-204ENST00000487252 POU5F1Q01860 360 aaKnown RBP12.35□□□□□ -0.43
TRIM56-204ENST00000487252 ZBTB16Q05516 673 aa12.35□□□□□ -0.43
TRIM56-204ENST00000487252 CUL4AQ13619 759 aa12.35□□□□□ -0.43
TRIM56-204ENST00000487252 ISXQ2M1V0 245 aa12.35□□□□□ -0.43
TRIM56-204ENST00000487252 HECTD3Q5T447 861 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms