RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 ECT2Q9H8V3 914 aa7.53□□□□□ -1.2
UBE4B-209ENST00000487244 FBRSL1Q9HCM7 1045 aaKnown RBP7.53□□□□□ -1.2
UBE4B-209ENST00000487244 CYLDQ9NQC7 956 aa7.53□□□□□ -1.2
UBE4B-209ENST00000487244 TLR8Q9NR97 1041 aaKnown RBP7.53□□□□□ -1.2
UBE4B-209ENST00000487244 FANCLQ9NW38 375 aa7.53□□□□□ -1.2
UBE4B-209ENST00000487244 SPATA6Q9NWH7 488 aaPredicted RBP7.53□□□□□ -1.2
UBE4B-209ENST00000487244 C2orf42Q9NWW7 574 aa7.53□□□□□ -1.2
UBE4B-209ENST00000487244 COMMD8Q9NX08 183 aa7.53□□□□□ -1.2
UBE4B-209ENST00000487244 NAGPAQ9UK23 515 aa7.53□□□□□ -1.2
UBE4B-209ENST00000487244 FAM186AA6NE01 2351 aa7.53□□□□□ -1.2
UBE4B-209ENST00000487244 EP300Q09472 2414 aaPredicted RBP7.52□□□□□ -1.2
UBE4B-209ENST00000487244 CFAP54Q96N23 3096 aa7.52□□□□□ -1.21
UBE4B-209ENST00000487244 FAM170AA1A519 330 aa7.52□□□□□ -1.21
UBE4B-209ENST00000487244 GTPBP10A4D1E9 387 aaKnown RBP7.52□□□□□ -1.21
UBE4B-209ENST00000487244 PES1O00541 588 aaKnown RBP7.52□□□□□ -1.21
UBE4B-209ENST00000487244 MAN2B1O00754 1011 aa7.52□□□□□ -1.21
UBE4B-209ENST00000487244 GREM1O60565 184 aa7.52□□□□□ -1.21
UBE4B-209ENST00000487244 RARGP13631 454 aa7.52□□□□□ -1.21
UBE4B-209ENST00000487244 SNRPBP14678 240 aaKnown RBP7.52□□□□□ -1.21
UBE4B-209ENST00000487244 GJA4P35212 333 aa7.52□□□□□ -1.21
UBE4B-209ENST00000487244 USP8P40818 1118 aa7.52□□□□□ -1.21
UBE4B-209ENST00000487244 RPS9P46781 194 aaKnown RBP7.52□□□□□ -1.21
UBE4B-209ENST00000487244 PLA2G4AP47712 749 aa7.52□□□□□ -1.21
UBE4B-209ENST00000487244 IFNAR2P48551 515 aa7.52□□□□□ -1.21
UBE4B-209ENST00000487244 KLK7P49862 253 aa7.52□□□□□ -1.21
UBE4B-209ENST00000487244 PDE6CP51160 858 aa7.52□□□□□ -1.21
UBE4B-209ENST00000487244 TYRO3Q06418 890 aa7.52□□□□□ -1.21
UBE4B-209ENST00000487244 KCNMA1Q12791 1236 aa7.52□□□□□ -1.21
UBE4B-209ENST00000487244 CCINQ13939 588 aa7.52□□□□□ -1.21
UBE4B-209ENST00000487244 NCAPHQ15003 741 aa7.52□□□□□ -1.21
UBE4B-209ENST00000487244 KRT31Q15323 416 aa7.52□□□□□ -1.21
UBE4B-209ENST00000487244 C10orf120Q5SQS8 335 aa7.52□□□□□ -1.21
UBE4B-209ENST00000487244 FSTL4Q6MZW2 842 aa7.52□□□□□ -1.21
UBE4B-209ENST00000487244 PMF1Q6P1K2 205 aa7.52□□□□□ -1.21
UBE4B-209ENST00000487244 DENND1BQ6P3S1 775 aa7.52□□□□□ -1.21
UBE4B-209ENST00000487244 TSSK4Q6SA08 328 aa7.52□□□□□ -1.21
UBE4B-209ENST00000487244 SASS6Q6UVJ0 657 aa7.52□□□□□ -1.21
UBE4B-209ENST00000487244 C12orf40Q86WS4 652 aa7.52□□□□□ -1.21
UBE4B-209ENST00000487244 MIB1Q86YT6 1006 aa7.52□□□□□ -1.21
UBE4B-209ENST00000487244 C1orf210Q8IVY1 113 aa7.52□□□□□ -1.21
UBE4B-209ENST00000487244 FAM114A1Q8IWE2 563 aa7.52□□□□□ -1.21
UBE4B-209ENST00000487244 SFTPA1Q8IWL2 248 aa7.52□□□□□ -1.21
UBE4B-209ENST00000487244 BBS7Q8IWZ6 715 aa7.52□□□□□ -1.21
UBE4B-209ENST00000487244 SLC35F5Q8WV83 523 aa7.52□□□□□ -1.21
UBE4B-209ENST00000487244 SHC3Q92529 594 aa7.52□□□□□ -1.21
UBE4B-209ENST00000487244 FAM122AQ96E09 287 aa7.52□□□□□ -1.21
UBE4B-209ENST00000487244 P2RY11Q96G91 374 aa7.52□□□□□ -1.21
UBE4B-209ENST00000487244 OSBPL6Q9BZF3 934 aa7.52□□□□□ -1.21
UBE4B-209ENST00000487244 DNAI2Q9GZS0 605 aa7.52□□□□□ -1.21
UBE4B-209ENST00000487244 NACA2Q9H009 215 aa7.52□□□□□ -1.21
UBE4B-209ENST00000487244 C8orf33Q9H7E9 229 aaPredicted RBP7.52□□□□□ -1.21
UBE4B-209ENST00000487244 LMAN1LQ9HAT1 526 aa7.52□□□□□ -1.21
UBE4B-209ENST00000487244 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.52□□□□□ -1.21
UBE4B-209ENST00000487244 POLR3BQ9NW08 1133 aaPredicted RBP7.52□□□□□ -1.21
UBE4B-209ENST00000487244 HESX1Q9UBX0 185 aa7.52□□□□□ -1.21
UBE4B-209ENST00000487244 APEX2Q9UBZ4 518 aa7.52□□□□□ -1.21
UBE4B-209ENST00000487244 CYTH4Q9UIA0 394 aa7.52□□□□□ -1.21
UBE4B-209ENST00000487244 MRPS17Q9Y2R5 130 aaKnown RBP7.52□□□□□ -1.21
UBE4B-209ENST00000487244 FHOD1Q9Y613 1164 aa7.52□□□□□ -1.21
UBE4B-209ENST00000487244 ZNF292O60281 2723 aa7.52□□□□□ -1.21
UBE4B-209ENST00000487244 GVINP1Q7Z2Y8 2422 aa7.52□□□□□ -1.21
UBE4B-209ENST00000487244 OTOGLQ3ZCN5 2332 aa7.52□□□□□ -1.21
UBE4B-209ENST00000487244 DMDP11532 3685 aa7.51□□□□□ -1.21
UBE4B-209ENST00000487244 SPAG17Q6Q759 2223 aa7.51□□□□□ -1.21
UBE4B-209ENST00000487244 SDK1Q7Z5N4 2213 aa7.51□□□□□ -1.21
UBE4B-209ENST00000487244 E2F8A0AVK6 867 aa7.51□□□□□ -1.21
UBE4B-209ENST00000487244 YJEFN3A6XGL0 299 aa7.51□□□□□ -1.21
UBE4B-209ENST00000487244 E7ENQ6 273 aa7.51□□□□□ -1.21
UBE4B-209ENST00000487244 EPHB6O15197 1021 aa7.51□□□□□ -1.21
UBE4B-209ENST00000487244 LETM1O95202 739 aaPredicted RBP7.51□□□□□ -1.21
UBE4B-209ENST00000487244 ZBED1O96006 694 aa7.51□□□□□ -1.21
UBE4B-209ENST00000487244 EGFP01133 1207 aa7.51□□□□□ -1.21
UBE4B-209ENST00000487244 KLKB1P03952 638 aa7.51□□□□□ -1.21
UBE4B-209ENST00000487244 HMBSP08397 361 aa7.51□□□□□ -1.21
UBE4B-209ENST00000487244 SETSIPP0DME0 302 aa7.51□□□□□ -1.21
UBE4B-209ENST00000487244 LCP1P13796 627 aa7.51□□□□□ -1.21
UBE4B-209ENST00000487244 EEF1GP26641 437 aaKnown RBP7.51□□□□□ -1.21
UBE4B-209ENST00000487244 ATP5C1P36542 298 aaKnown RBP7.51□□□□□ -1.21
UBE4B-209ENST00000487244 OPRD1P41143 372 aa7.51□□□□□ -1.21
UBE4B-209ENST00000487244 GALK1P51570 392 aa7.51□□□□□ -1.21
UBE4B-209ENST00000487244 MFAP3P55082 362 aa7.51□□□□□ -1.21
UBE4B-209ENST00000487244 MLLT6P55198 1093 aaPredicted RBP7.51□□□□□ -1.21
UBE4B-209ENST00000487244 YWHAGP61981 247 aaKnown RBP eCLIP7.51□□□□□ -1.21
UBE4B-209ENST00000487244 MYL5Q02045 173 aa7.51□□□□□ -1.21
UBE4B-209ENST00000487244 EFEMP1Q12805 493 aa7.51□□□□□ -1.21
UBE4B-209ENST00000487244 DHCR24Q15392 516 aa7.51□□□□□ -1.21
UBE4B-209ENST00000487244 CNGA2Q16280 664 aa7.51□□□□□ -1.21
UBE4B-209ENST00000487244 ANO6Q4KMQ2 910 aa7.51□□□□□ -1.21
UBE4B-209ENST00000487244 TMEM196Q5HYL7 178 aa7.51□□□□□ -1.21
UBE4B-209ENST00000487244 CT47A1Q5JQC4 288 aaPredicted RBP7.51□□□□□ -1.21
UBE4B-209ENST00000487244 LY6G5CQ5SRR4 150 aa7.51□□□□□ -1.21
UBE4B-209ENST00000487244 PM20D1Q6GTS8 502 aa7.51□□□□□ -1.21
UBE4B-209ENST00000487244 RHBDF2Q6PJF5 856 aa7.51□□□□□ -1.21
UBE4B-209ENST00000487244 ADGRG2Q8IZP9 1017 aa7.51□□□□□ -1.21
UBE4B-209ENST00000487244 CPA6Q8N4T0 437 aa7.51□□□□□ -1.21
UBE4B-209ENST00000487244 AOPEPQ8N6M6 819 aa7.51□□□□□ -1.21
UBE4B-209ENST00000487244 EDEM1Q92611 657 aa7.51□□□□□ -1.21
UBE4B-209ENST00000487244 ATOH1Q92858 354 aaPredicted RBP7.51□□□□□ -1.21
UBE4B-209ENST00000487244 MSANTD3Q96H12 275 aa7.51□□□□□ -1.21
UBE4B-209ENST00000487244 NELL2Q99435 816 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms