RNA–Protein interactions for RNA: ENST00000487193.1

ATPAF1-205, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 513 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-205ENST00000487193 CYP4F2P78329 520 aa12.91□□□□□ -0.34
ATPAF1-205ENST00000487193 CYP27A1Q02318 531 aa12.91□□□□□ -0.34
ATPAF1-205ENST00000487193 ZNF234Q14588 700 aa12.91□□□□□ -0.34
ATPAF1-205ENST00000487193 TGIF1Q15583 401 aa12.91□□□□□ -0.34
ATPAF1-205ENST00000487193 KYAT1Q16773 422 aa12.91□□□□□ -0.34
ATPAF1-205ENST00000487193 TSGA10IPQ3SY00 556 aa12.91□□□□□ -0.34
ATPAF1-205ENST00000487193 KIAA0895LQ68EN5 471 aa12.91□□□□□ -0.34
ATPAF1-205ENST00000487193 C4orf50Q6ZRC1 276 aa12.91□□□□□ -0.34
ATPAF1-205ENST00000487193 CD302Q8IX05 232 aa12.91□□□□□ -0.34
ATPAF1-205ENST00000487193 ADGRF2Q8IZF7 708 aa12.91□□□□□ -0.34
ATPAF1-205ENST00000487193 FAM177A1Q8N128 213 aaPredicted RBP12.91□□□□□ -0.34
ATPAF1-205ENST00000487193 OR2T3Q8NH03 318 aa12.91□□□□□ -0.34
ATPAF1-205ENST00000487193 SPATA20Q8TB22 786 aa12.91□□□□□ -0.34
ATPAF1-205ENST00000487193 UCMAQ8WVF2 138 aa12.91□□□□□ -0.34
ATPAF1-205ENST00000487193 TMEM60Q9H2L4 133 aa12.91□□□□□ -0.34
ATPAF1-205ENST00000487193 CHORDC1Q9UHD1 332 aaPredicted RBP12.91□□□□□ -0.34
ATPAF1-205ENST00000487193 POLQO75417 2590 aa12.9□□□□□ -0.34
ATPAF1-205ENST00000487193 A0A1B0GVM2 712 aa12.9□□□□□ -0.34
ATPAF1-205ENST00000487193 VPS37CA5D8V6 355 aaPredicted RBP12.9□□□□□ -0.34
ATPAF1-205ENST00000487193 NPC1O15118 1278 aa12.9□□□□□ -0.34
ATPAF1-205ENST00000487193 FAM189A1O60320 539 aa12.9□□□□□ -0.34
ATPAF1-205ENST00000487193 TNFSF15O95150 251 aa12.9□□□□□ -0.34
ATPAF1-205ENST00000487193 THEGLP0DJG4 465 aa12.9□□□□□ -0.34
ATPAF1-205ENST00000487193 MAPTP10636 758 aaKnown RBP12.9□□□□□ -0.34
ATPAF1-205ENST00000487193 PSMC1P62191 440 aaKnown RBP12.9□□□□□ -0.34
ATPAF1-205ENST00000487193 ENPP2Q13822 863 aa12.9□□□□□ -0.34
ATPAF1-205ENST00000487193 GEN1Q17RS7 908 aa12.9□□□□□ -0.34
ATPAF1-205ENST00000487193 ISXQ2M1V0 245 aa12.9□□□□□ -0.34
ATPAF1-205ENST00000487193 ARL14Q8N4G2 192 aa12.9□□□□□ -0.34
ATPAF1-205ENST00000487193 TMEM161BQ8NDZ6 487 aa12.9□□□□□ -0.34
ATPAF1-205ENST00000487193 SORCS1Q8WY21 1168 aa12.9□□□□□ -0.34
ATPAF1-205ENST00000487193 MYLPFQ96A32 169 aa12.9□□□□□ -0.34
ATPAF1-205ENST00000487193 JAKMIP1Q96N16 626 aaKnown RBP12.9□□□□□ -0.34
ATPAF1-205ENST00000487193 SLITRK1Q96PX8 696 aa12.9□□□□□ -0.34
ATPAF1-205ENST00000487193 CCSER2Q9H7U1 834 aa12.9□□□□□ -0.34
ATPAF1-205ENST00000487193 KIAA1024Q9UPX6 916 aa12.9□□□□□ -0.34
ATPAF1-205ENST00000487193 DERAQ9Y315 318 aa12.9□□□□□ -0.34
ATPAF1-205ENST00000487193 NBASA2RRP1 2371 aa12.89□□□□□ -0.35
ATPAF1-205ENST00000487193 CKAP5Q14008 2032 aa12.89□□□□□ -0.35
ATPAF1-205ENST00000487193 LRRK1Q38SD2 2015 aa12.89□□□□□ -0.35
ATPAF1-205ENST00000487193 CELSR2Q9HCU4 2923 aa12.89□□□□□ -0.35
ATPAF1-205ENST00000487193 TLR4O00206 839 aa12.89□□□□□ -0.35
ATPAF1-205ENST00000487193 CCT6AP40227 531 aaKnown RBP12.89□□□□□ -0.35
ATPAF1-205ENST00000487193 RXRGP48443 463 aa12.89□□□□□ -0.35
ATPAF1-205ENST00000487193 LIG4P49917 911 aa12.89□□□□□ -0.35
ATPAF1-205ENST00000487193 RAD51AP2Q09MP3 1159 aa12.89□□□□□ -0.35
ATPAF1-205ENST00000487193 MAPK7Q13164 816 aa12.89□□□□□ -0.35
ATPAF1-205ENST00000487193 ZNF211Q13398 564 aaPredicted RBP12.89□□□□□ -0.35
ATPAF1-205ENST00000487193 KRTAP21-3Q3LHN1 58 aa12.89□□□□□ -0.35
ATPAF1-205ENST00000487193 HS1BP3Q53T59 392 aa12.89□□□□□ -0.35
ATPAF1-205ENST00000487193 HECTD3Q5T447 861 aa12.89□□□□□ -0.35
ATPAF1-205ENST00000487193 FAM171BQ6P995 826 aa12.89□□□□□ -0.35
ATPAF1-205ENST00000487193 VSTM1Q6UX27 236 aa12.89□□□□□ -0.35
ATPAF1-205ENST00000487193 SERPINA13PQ6UXR4 307 aa12.89□□□□□ -0.35
ATPAF1-205ENST00000487193 RDH13Q8NBN7 331 aa12.89□□□□□ -0.35
ATPAF1-205ENST00000487193 NTPCRQ9BSD7 190 aaKnown RBP12.89□□□□□ -0.35
ATPAF1-205ENST00000487193 MSTO1Q9BUK6 570 aa12.89□□□□□ -0.35
ATPAF1-205ENST00000487193 NACA2Q9H009 215 aa12.89□□□□□ -0.35
ATPAF1-205ENST00000487193 SGK2Q9HBY8 427 aa12.89□□□□□ -0.35
ATPAF1-205ENST00000487193 CPSF3Q9UKF6 684 aaKnown RBP12.89□□□□□ -0.35
ATPAF1-205ENST00000487193 SNX14Q9Y5W7 946 aa12.89□□□□□ -0.35
ATPAF1-205ENST00000487193 CSMD1Q96PZ7 3565 aa12.89□□□□□ -0.35
ATPAF1-205ENST00000487193 ZFHX3Q15911 3703 aa12.89□□□□□ -0.35
ATPAF1-205ENST00000487193 CENPEQ02224 2701 aa12.89□□□□□ -0.35
ATPAF1-205ENST00000487193 A0A1W2PR77 199 aa12.88□□□□□ -0.35
ATPAF1-205ENST00000487193 E9PMD0 336 aa12.88□□□□□ -0.35
ATPAF1-205ENST00000487193 F8VP50 259 aa12.88□□□□□ -0.35
ATPAF1-205ENST00000487193 DNTTP04053 509 aa12.88□□□□□ -0.35
ATPAF1-205ENST00000487193 XBP1P17861 261 aa12.88□□□□□ -0.35
ATPAF1-205ENST00000487193 DCTP40126 519 aa12.88□□□□□ -0.35
ATPAF1-205ENST00000487193 ACOT2P49753 483 aa12.88□□□□□ -0.35
ATPAF1-205ENST00000487193 SMTNP53814 917 aa12.88□□□□□ -0.35
ATPAF1-205ENST00000487193 NXPH1P58417 271 aa12.88□□□□□ -0.35
ATPAF1-205ENST00000487193 NOP14P78316 857 aaKnown RBP12.88□□□□□ -0.35
ATPAF1-205ENST00000487193 STK3Q13188 491 aa12.88□□□□□ -0.35
ATPAF1-205ENST00000487193 BLOC1S2Q6QNY1 142 aa12.88□□□□□ -0.35
ATPAF1-205ENST00000487193 HTR3DQ70Z44 454 aa12.88□□□□□ -0.35
ATPAF1-205ENST00000487193 TICAM1Q8IUC6 712 aa12.88□□□□□ -0.35
ATPAF1-205ENST00000487193 TMEM86AQ8N2M4 240 aa12.88□□□□□ -0.35
ATPAF1-205ENST00000487193 ZNF366Q8N895 744 aa12.88□□□□□ -0.35
ATPAF1-205ENST00000487193 MAPK15Q8TD08 544 aa12.88□□□□□ -0.35
ATPAF1-205ENST00000487193 GANCQ8TET4 914 aa12.88□□□□□ -0.35
ATPAF1-205ENST00000487193 HPS3Q969F9 1004 aa12.88□□□□□ -0.35
ATPAF1-205ENST00000487193 ZNF560Q96MR9 790 aa12.88□□□□□ -0.35
ATPAF1-205ENST00000487193 LARP6Q9BRS8 491 aaKnown RBP12.88□□□□□ -0.35
ATPAF1-205ENST00000487193 RUSC1Q9BVN2 902 aa12.88□□□□□ -0.35
ATPAF1-205ENST00000487193 CIPCQ9C0C6 399 aa12.88□□□□□ -0.35
ATPAF1-205ENST00000487193 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.88□□□□□ -0.35
ATPAF1-205ENST00000487193 DDX19AQ9NUU7 478 aaKnown RBP12.88□□□□□ -0.35
ATPAF1-205ENST00000487193 MARK1Q9P0L2 795 aa12.88□□□□□ -0.35
ATPAF1-205ENST00000487193 AGAP1Q9UPQ3 857 aa12.88□□□□□ -0.35
ATPAF1-205ENST00000487193 CRYBG3Q68DQ2 2970 aa12.88□□□□□ -0.35
ATPAF1-205ENST00000487193 KIF26BQ2KJY2 2108 aa12.88□□□□□ -0.35
ATPAF1-205ENST00000487193 FFAR2O15552 330 aa12.87□□□□□ -0.35
ATPAF1-205ENST00000487193 NOBOXO60393 691 aa12.87□□□□□ -0.35
ATPAF1-205ENST00000487193 LMO2P25791 158 aa12.87□□□□□ -0.35
ATPAF1-205ENST00000487193 YWHAQP27348 245 aa12.87□□□□□ -0.35
ATPAF1-205ENST00000487193 GRNP28799 593 aaKnown RBP12.87□□□□□ -0.35
ATPAF1-205ENST00000487193 PCSK1P29120 753 aa12.87□□□□□ -0.35
ATPAF1-205ENST00000487193 MCM7P33993 719 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms