RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 PPP6R2O75170 966 aa4.56□□□□□ -1.68
PTCD3-216ENST00000487043 CD4P01730 458 aa4.56□□□□□ -1.68
PTCD3-216ENST00000487043 PRKCBP05771 671 aa4.56□□□□□ -1.68
PTCD3-216ENST00000487043 HLA-DOAP06340 250 aa4.56□□□□□ -1.68
PTCD3-216ENST00000487043 ADORA2AP29274 412 aa4.56□□□□□ -1.68
PTCD3-216ENST00000487043 CD6P30203 668 aa4.56□□□□□ -1.68
PTCD3-216ENST00000487043 KRT9P35527 623 aa4.56□□□□□ -1.68
PTCD3-216ENST00000487043 NPTX2P47972 431 aa4.56□□□□□ -1.68
PTCD3-216ENST00000487043 RABGGTBP53611 331 aa4.56□□□□□ -1.68
PTCD3-216ENST00000487043 ACTR2P61160 394 aa4.56□□□□□ -1.68
PTCD3-216ENST00000487043 MPP1Q00013 466 aa4.56□□□□□ -1.68
PTCD3-216ENST00000487043 FPGSQ05932 587 aa4.56□□□□□ -1.68
PTCD3-216ENST00000487043 TRPC3Q13507 836 aa4.56□□□□□ -1.68
PTCD3-216ENST00000487043 DYRK1AQ13627 763 aa4.56□□□□□ -1.68
PTCD3-216ENST00000487043 RPS6KA2Q15349 733 aa4.56□□□□□ -1.68
PTCD3-216ENST00000487043 DLGAP5Q15398 846 aa4.56□□□□□ -1.68
PTCD3-216ENST00000487043 PDCD4Q53EL6 469 aaKnown RBP4.56□□□□□ -1.68
PTCD3-216ENST00000487043 HYIQ5T013 277 aa4.56□□□□□ -1.68
PTCD3-216ENST00000487043 RBM20Q5T481 1227 aaKnown RBP4.56□□□□□ -1.68
PTCD3-216ENST00000487043 VPS53Q5VIR6 699 aa4.56□□□□□ -1.68
PTCD3-216ENST00000487043 FAAH2Q6GMR7 532 aa4.56□□□□□ -1.68
PTCD3-216ENST00000487043 FAM180BQ6P0A1 224 aa4.56□□□□□ -1.68
PTCD3-216ENST00000487043 Q6ZRM9 215 aa4.56□□□□□ -1.68
PTCD3-216ENST00000487043 RAB11FIP2Q7L804 512 aa4.56□□□□□ -1.68
PTCD3-216ENST00000487043 POLNQ7Z5Q5 900 aa4.56□□□□□ -1.68
PTCD3-216ENST00000487043 TTC30AQ86WT1 665 aa4.56□□□□□ -1.68
PTCD3-216ENST00000487043 MAPKAPK5Q8IW41 473 aa4.56□□□□□ -1.68
PTCD3-216ENST00000487043 HERVK_113Q902F9 699 aa4.56□□□□□ -1.68
PTCD3-216ENST00000487043 TMEM125Q96AQ2 219 aa4.56□□□□□ -1.68
PTCD3-216ENST00000487043 ZNF668Q96K58 619 aaPredicted RBP4.56□□□□□ -1.68
PTCD3-216ENST00000487043 CDK19Q9BWU1 502 aa4.56□□□□□ -1.68
PTCD3-216ENST00000487043 TEX101Q9BY14 249 aa4.56□□□□□ -1.68
PTCD3-216ENST00000487043 GPR87Q9BY21 358 aa4.56□□□□□ -1.68
PTCD3-216ENST00000487043 SCAND2PQ9GZW5 306 aaPredicted RBP4.56□□□□□ -1.68
PTCD3-216ENST00000487043 UNC45AQ9H3U1 944 aa4.56□□□□□ -1.68
PTCD3-216ENST00000487043 PANK3Q9H999 370 aa4.56□□□□□ -1.68
PTCD3-216ENST00000487043 FSCN3Q9NQT6 498 aa4.56□□□□□ -1.68
PTCD3-216ENST00000487043 TRPM5Q9NZQ8 1165 aa4.56□□□□□ -1.68
PTCD3-216ENST00000487043 PPP4R1LQ9P1A2 415 aa4.56□□□□□ -1.68
PTCD3-216ENST00000487043 SERTAD3Q9UJW9 196 aa4.56□□□□□ -1.68
PTCD3-216ENST00000487043 SLC13A4Q9UKG4 626 aa4.56□□□□□ -1.68
PTCD3-216ENST00000487043 USP22Q9UPT9 525 aa4.56□□□□□ -1.68
PTCD3-216ENST00000487043 NEU2Q9Y3R4 380 aa4.56□□□□□ -1.68
PTCD3-216ENST00000487043 CPS1P31327 1500 aa4.56□□□□□ -1.68
PTCD3-216ENST00000487043 PRAMEF33A0A0G2JMD5 474 aa4.55□□□□□ -1.68
PTCD3-216ENST00000487043 GOLGA6L6A8MZA4 724 aa4.55□□□□□ -1.68
PTCD3-216ENST00000487043 E7ENX8 843 aa4.55□□□□□ -1.68
PTCD3-216ENST00000487043 AGPSO00116 658 aa4.55□□□□□ -1.68
PTCD3-216ENST00000487043 HOXC11O43248 304 aaPredicted RBP4.55□□□□□ -1.68
PTCD3-216ENST00000487043 PRAMEF10O60809 474 aa4.55□□□□□ -1.68
PTCD3-216ENST00000487043 TAF5LO75529 589 aa4.55□□□□□ -1.68
PTCD3-216ENST00000487043 RPS6KA4O75676 772 aa4.55□□□□□ -1.68
PTCD3-216ENST00000487043 ZFPL1O95159 310 aa4.55□□□□□ -1.68
PTCD3-216ENST00000487043 CSF1RP07333 972 aa4.55□□□□□ -1.68
PTCD3-216ENST00000487043 LDHCP07864 332 aa4.55□□□□□ -1.68
PTCD3-216ENST00000487043 ATP1A3P13637 1013 aa4.55□□□□□ -1.68
PTCD3-216ENST00000487043 TACR2P21452 398 aa4.55□□□□□ -1.68
PTCD3-216ENST00000487043 PPIFP30405 207 aaKnown RBP4.55□□□□□ -1.68
PTCD3-216ENST00000487043 UQCRC1P31930 480 aa4.55□□□□□ -1.68
PTCD3-216ENST00000487043 ELF1P32519 619 aa4.55□□□□□ -1.68
PTCD3-216ENST00000487043 LIFRP42702 1097 aa4.55□□□□□ -1.68
PTCD3-216ENST00000487043 GATMP50440 423 aa4.55□□□□□ -1.68
PTCD3-216ENST00000487043 SEC24CP53992 1094 aa4.55□□□□□ -1.68
PTCD3-216ENST00000487043 HSPA2P54652 639 aa4.55□□□□□ -1.68
PTCD3-216ENST00000487043 TAP2Q03519 686 aa4.55□□□□□ -1.68
PTCD3-216ENST00000487043 FHL3Q13643 280 aa4.55□□□□□ -1.68
PTCD3-216ENST00000487043 CCNIQ14094 377 aa4.55□□□□□ -1.68
PTCD3-216ENST00000487043 EFR3AQ14156 821 aa4.55□□□□□ -1.68
PTCD3-216ENST00000487043 P3H1Q32P28 736 aa4.55□□□□□ -1.68
PTCD3-216ENST00000487043 CERCAMQ5T4B2 595 aa4.55□□□□□ -1.68
PTCD3-216ENST00000487043 DEPDC1Q5TB30 811 aa4.55□□□□□ -1.68
PTCD3-216ENST00000487043 SFRP4Q6FHJ7 346 aaPredicted RBP4.55□□□□□ -1.68
PTCD3-216ENST00000487043 NFRKBQ6P4R8 1299 aa4.55□□□□□ -1.68
PTCD3-216ENST00000487043 CLEC9AQ6UXN8 241 aa4.55□□□□□ -1.68
PTCD3-216ENST00000487043 C1orf122Q6ZSJ8 110 aa4.55□□□□□ -1.68
PTCD3-216ENST00000487043 TMPRSS9Q7Z410 1059 aa4.55□□□□□ -1.68
PTCD3-216ENST00000487043 LIMS2Q7Z4I7 341 aa4.55□□□□□ -1.68
PTCD3-216ENST00000487043 SPRED1Q7Z699 444 aa4.55□□□□□ -1.68
PTCD3-216ENST00000487043 ADGRG5Q8IZF4 528 aa4.55□□□□□ -1.68
PTCD3-216ENST00000487043 FSTL5Q8N475 847 aaPredicted RBP4.55□□□□□ -1.68
PTCD3-216ENST00000487043 C11orf44Q8N8P7 122 aa4.55□□□□□ -1.68
PTCD3-216ENST00000487043 Q8NA96 180 aa4.55□□□□□ -1.68
PTCD3-216ENST00000487043 CEP70Q8NHQ1 597 aa4.55□□□□□ -1.68
PTCD3-216ENST00000487043 WDR60Q8WVS4 1066 aa4.55□□□□□ -1.68
PTCD3-216ENST00000487043 ATRIPQ8WXE1 791 aa4.55□□□□□ -1.68
PTCD3-216ENST00000487043 SNX19Q92543 992 aa4.55□□□□□ -1.68
PTCD3-216ENST00000487043 RSC1A1Q92681 617 aa4.55□□□□□ -1.68
PTCD3-216ENST00000487043 DCLRE1CQ96SD1 692 aaKnown RBP4.55□□□□□ -1.68
PTCD3-216ENST00000487043 VPS16Q9H269 839 aa4.55□□□□□ -1.68
PTCD3-216ENST00000487043 PRKRIP1Q9H875 184 aaPredicted RBP4.55□□□□□ -1.68
PTCD3-216ENST00000487043 CHODLQ9H9P2 273 aa4.55□□□□□ -1.68
PTCD3-216ENST00000487043 VPS51Q9UID3 782 aa4.55□□□□□ -1.68
PTCD3-216ENST00000487043 SCINQ9Y6U3 715 aa4.55□□□□□ -1.68
PTCD3-216ENST00000487043 CHD2O14647 1828 aaKnown RBP4.55□□□□□ -1.68
PTCD3-216ENST00000487043 LMTK3Q96Q04 1460 aa4.55□□□□□ -1.68
PTCD3-216ENST00000487043 PTCH1Q13635 1447 aa4.55□□□□□ -1.68
PTCD3-216ENST00000487043 NINLQ9Y2I6 1382 aa4.54□□□□□ -1.68
PTCD3-216ENST00000487043 SPATA31A3Q5VYP0 1347 aa4.54□□□□□ -1.68
PTCD3-216ENST00000487043 MYADML2A6NDP7 307 aa4.54□□□□□ -1.68
PTCD3-216ENST00000487043 DIRC3C9JPN6 131 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms