RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 CEP78Q5JTW2 689 aa4.12□□□□□ -1.75
SNRNP27-204ENST00000487029 TEDDM1Q5T9Z0 273 aa4.12□□□□□ -1.75
SNRNP27-204ENST00000487029 ABLIM2Q6H8Q1 611 aa4.12□□□□□ -1.75
SNRNP27-204ENST00000487029 SLC18B1Q6NT16 456 aa4.12□□□□□ -1.75
SNRNP27-204ENST00000487029 ZNF354CQ86Y25 554 aa4.12□□□□□ -1.75
SNRNP27-204ENST00000487029 IZUMO1Q8IYV9 350 aa4.12□□□□□ -1.75
SNRNP27-204ENST00000487029 SAMD14Q8IZD0 417 aaPredicted RBP4.12□□□□□ -1.75
SNRNP27-204ENST00000487029 MBD3L2Q8NHZ7 208 aaPredicted RBP4.12□□□□□ -1.75
SNRNP27-204ENST00000487029 ABHD5Q8WTS1 349 aa4.12□□□□□ -1.75
SNRNP27-204ENST00000487029 TRIM63Q969Q1 353 aa4.12□□□□□ -1.75
SNRNP27-204ENST00000487029 EID2BQ96D98 161 aa4.12□□□□□ -1.75
SNRNP27-204ENST00000487029 HIST1H2AAQ96QV6 131 aa4.12□□□□□ -1.75
SNRNP27-204ENST00000487029 C17orf80Q9BSJ5 609 aa4.12□□□□□ -1.75
SNRNP27-204ENST00000487029 KATNAL1Q9BW62 490 aa4.12□□□□□ -1.75
SNRNP27-204ENST00000487029 SEMA4CQ9C0C4 833 aa4.12□□□□□ -1.75
SNRNP27-204ENST00000487029 HELLSQ9NRZ9 838 aa4.12□□□□□ -1.75
SNRNP27-204ENST00000487029 USP22Q9UPT9 525 aa4.12□□□□□ -1.75
SNRNP27-204ENST00000487029 PCDHGB3Q9Y5G1 929 aa4.12□□□□□ -1.75
SNRNP27-204ENST00000487029 CCDC189A1A4V9 331 aa4.11□□□□□ -1.75
SNRNP27-204ENST00000487029 TARM1B6A8C7 271 aa4.11□□□□□ -1.75
SNRNP27-204ENST00000487029 SLC16A3O15427 465 aaKnown RBP4.11□□□□□ -1.75
SNRNP27-204ENST00000487029 SNX2O60749 519 aa4.11□□□□□ -1.75
SNRNP27-204ENST00000487029 NTSR2O95665 410 aa4.11□□□□□ -1.75
SNRNP27-204ENST00000487029 VIPP01282 170 aa4.11□□□□□ -1.75
SNRNP27-204ENST00000487029 FGAP02671 866 aa4.11□□□□□ -1.75
SNRNP27-204ENST00000487029 PDHA1P08559 390 aa4.11□□□□□ -1.75
SNRNP27-204ENST00000487029 SRGAP2BP0DMP2 458 aa4.11□□□□□ -1.75
SNRNP27-204ENST00000487029 CYP2D6P10635 497 aa4.11□□□□□ -1.75
SNRNP27-204ENST00000487029 RBL1P28749 1068 aa4.11□□□□□ -1.75
SNRNP27-204ENST00000487029 NTSR1P30989 418 aa4.11□□□□□ -1.75
SNRNP27-204ENST00000487029 CCT5P48643 541 aa4.11□□□□□ -1.75
SNRNP27-204ENST00000487029 MTHFSP49914 203 aa4.11□□□□□ -1.75
SNRNP27-204ENST00000487029 RENBPP51606 427 aa4.11□□□□□ -1.75
SNRNP27-204ENST00000487029 POLE2P56282 527 aa4.11□□□□□ -1.75
SNRNP27-204ENST00000487029 SP2Q02086 613 aa4.11□□□□□ -1.75
SNRNP27-204ENST00000487029 BIRC3Q13489 604 aa4.11□□□□□ -1.75
SNRNP27-204ENST00000487029 PRKG1Q13976 671 aa4.11□□□□□ -1.75
SNRNP27-204ENST00000487029 PROSER3Q2NL68 480 aa4.11□□□□□ -1.75
SNRNP27-204ENST00000487029 ZNF260Q3ZCT1 412 aa4.11□□□□□ -1.75
SNRNP27-204ENST00000487029 FAM153CQ494X1 144 aa4.11□□□□□ -1.75
SNRNP27-204ENST00000487029 SUMO4Q6EEV6 95 aa4.11□□□□□ -1.75
SNRNP27-204ENST00000487029 TANGO2Q6ICL3 276 aa4.11□□□□□ -1.75
SNRNP27-204ENST00000487029 RASGRP3Q8IV61 690 aa4.11□□□□□ -1.75
SNRNP27-204ENST00000487029 ADAMTS15Q8TE58 950 aa4.11□□□□□ -1.75
SNRNP27-204ENST00000487029 FKBP10Q96AY3 582 aa4.11□□□□□ -1.75
SNRNP27-204ENST00000487029 TBC1D20Q96BZ9 403 aa4.11□□□□□ -1.75
SNRNP27-204ENST00000487029 GRAMD1AQ96CP6 724 aa4.11□□□□□ -1.75
SNRNP27-204ENST00000487029 ZBTB45Q96K62 511 aaPredicted RBP4.11□□□□□ -1.75
SNRNP27-204ENST00000487029 VN1R3Q9BXE9 311 aa4.11□□□□□ -1.75
SNRNP27-204ENST00000487029 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.11□□□□□ -1.75
SNRNP27-204ENST00000487029 GLOD4Q9HC38 313 aa4.11□□□□□ -1.75
SNRNP27-204ENST00000487029 RIMKLBQ9ULI2 386 aa4.11□□□□□ -1.75
SNRNP27-204ENST00000487029 GCOM1H8Y6P7 765 aaPredicted RBP4.1□□□□□ -1.75
SNRNP27-204ENST00000487029 AGPSO00116 658 aa4.1□□□□□ -1.75
SNRNP27-204ENST00000487029 PCDH17O14917 1159 aa4.1□□□□□ -1.75
SNRNP27-204ENST00000487029 NPHP1O15259 732 aa4.1□□□□□ -1.75
SNRNP27-204ENST00000487029 RHOP08100 348 aa4.1□□□□□ -1.75
SNRNP27-204ENST00000487029 ITGA2BP08514 1039 aa4.1□□□□□ -1.75
SNRNP27-204ENST00000487029 DHRS4L1P0CG22 281 aa4.1□□□□□ -1.75
SNRNP27-204ENST00000487029 HSD3B1P14060 373 aa4.1□□□□□ -1.75
SNRNP27-204ENST00000487029 DRD4P21917 467 aa4.1□□□□□ -1.75
SNRNP27-204ENST00000487029 NR4A2P43354 598 aa4.1□□□□□ -1.75
SNRNP27-204ENST00000487029 ALDH18A1P54886 795 aaKnown RBP4.1□□□□□ -1.75
SNRNP27-204ENST00000487029 TIRAPP58753 221 aa4.1□□□□□ -1.75
SNRNP27-204ENST00000487029 CLCA4Q14CN2 919 aa4.1□□□□□ -1.75
SNRNP27-204ENST00000487029 POSTNQ15063 836 aa4.1□□□□□ -1.75
SNRNP27-204ENST00000487029 TBCCQ15814 346 aa4.1□□□□□ -1.75
SNRNP27-204ENST00000487029 LY6KQ17RY6 165 aa4.1□□□□□ -1.75
SNRNP27-204ENST00000487029 ZNF618Q5T7W0 954 aa4.1□□□□□ -1.75
SNRNP27-204ENST00000487029 LIN54Q6MZP7 749 aa4.1□□□□□ -1.75
SNRNP27-204ENST00000487029 MAVSQ7Z434 540 aa4.1□□□□□ -1.75
SNRNP27-204ENST00000487029 GALNT15Q8N3T1 639 aa4.1□□□□□ -1.75
SNRNP27-204ENST00000487029 STT3BQ8TCJ2 826 aa4.1□□□□□ -1.75
SNRNP27-204ENST00000487029 SOCS4Q8WXH5 440 aa4.1□□□□□ -1.75
SNRNP27-204ENST00000487029 GLG1Q92896 1179 aa4.1□□□□□ -1.75
SNRNP27-204ENST00000487029 RFKQ969G6 155 aa4.1□□□□□ -1.75
SNRNP27-204ENST00000487029 ALG8Q9BVK2 526 aa4.1□□□□□ -1.75
SNRNP27-204ENST00000487029 SORBS1Q9BX66 1292 aaKnown RBP4.1□□□□□ -1.75
SNRNP27-204ENST00000487029 TP63Q9H3D4 680 aaPredicted RBP4.1□□□□□ -1.75
SNRNP27-204ENST00000487029 TRIM36Q9NQ86 728 aa4.1□□□□□ -1.75
SNRNP27-204ENST00000487029 KLC4Q9NSK0 619 aa4.1□□□□□ -1.75
SNRNP27-204ENST00000487029 HERC5Q9UII4 1024 aaKnown RBP4.1□□□□□ -1.75
SNRNP27-204ENST00000487029 SCAF8Q9UPN6 1271 aaKnown RBP4.1□□□□□ -1.75
SNRNP27-204ENST00000487029 DRG1Q9Y295 367 aaKnown RBP4.1□□□□□ -1.75
SNRNP27-204ENST00000487029 GPR52Q9Y2T5 361 aa4.1□□□□□ -1.75
SNRNP27-204ENST00000487029 ADGRA2Q96PE1 1338 aa4.1□□□□□ -1.75
SNRNP27-204ENST00000487029 COL15A1P39059 1388 aa4.1□□□□□ -1.75
SNRNP27-204ENST00000487029 NOTCH4Q99466 2003 aa4.09□□□□□ -1.75
SNRNP27-204ENST00000487029 A1L4Q6 167 aa4.09□□□□□ -1.75
SNRNP27-204ENST00000487029 TISP43B9A030 160 aa4.09□□□□□ -1.75
SNRNP27-204ENST00000487029 PPP6CO00743 305 aa4.09□□□□□ -1.75
SNRNP27-204ENST00000487029 FCHO1O14526 889 aa4.09□□□□□ -1.75
SNRNP27-204ENST00000487029 INSIG1O15503 277 aa4.09□□□□□ -1.75
SNRNP27-204ENST00000487029 ZSCAN9O15535 394 aaPredicted RBP4.09□□□□□ -1.75
SNRNP27-204ENST00000487029 USP1O94782 785 aa4.09□□□□□ -1.75
SNRNP27-204ENST00000487029 NXPH3O95157 252 aa4.09□□□□□ -1.75
SNRNP27-204ENST00000487029 ANXA6P08133 673 aa4.09□□□□□ -1.75
SNRNP27-204ENST00000487029 CD19P15391 556 aa4.09□□□□□ -1.75
SNRNP27-204ENST00000487029 HTR7P34969 479 aa4.09□□□□□ -1.75
SNRNP27-204ENST00000487029 CCT8P50990 548 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms