RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 CCNIQ14094 377 aa12.81□□□□□ -0.36
HSPG2-211ENST00000486901 TBC1D25Q3MII6 688 aa12.81□□□□□ -0.36
HSPG2-211ENST00000486901 RBM44Q6ZP01 1051 aaKnown RBP12.81□□□□□ -0.36
HSPG2-211ENST00000486901 SH2D5Q6ZV89 423 aa12.81□□□□□ -0.36
HSPG2-211ENST00000486901 MARK2Q7KZI7 788 aaKnown RBP12.81□□□□□ -0.36
HSPG2-211ENST00000486901 HIC2Q96JB3 615 aa12.81□□□□□ -0.36
HSPG2-211ENST00000486901 CCDC106Q9BWC9 280 aa12.81□□□□□ -0.36
HSPG2-211ENST00000486901 NIF3L1Q9GZT8 377 aa12.81□□□□□ -0.36
HSPG2-211ENST00000486901 DHX35Q9H5Z1 703 aaKnown RBP12.81□□□□□ -0.36
HSPG2-211ENST00000486901 C17orf75Q9HAS0 396 aa12.81□□□□□ -0.36
HSPG2-211ENST00000486901 NOP56O00567 594 aaKnown RBP12.8□□□□□ -0.36
HSPG2-211ENST00000486901 TPP1O14773 563 aa12.8□□□□□ -0.36
HSPG2-211ENST00000486901 PMM2O15305 246 aa12.8□□□□□ -0.36
HSPG2-211ENST00000486901 ZC3H11AO75152 810 aaKnown RBP eCLIP12.8□□□□□ -0.362e-6■■■□□ 16.9
HSPG2-211ENST00000486901 STBD1O95210 358 aa12.8□□□□□ -0.36
HSPG2-211ENST00000486901 GSTA2P09210 222 aa12.8□□□□□ -0.36
HSPG2-211ENST00000486901 ERVK-10P10266 1014 aa12.8□□□□□ -0.36
HSPG2-211ENST00000486901 TBXAS1P24557 533 aaPredicted RBP12.8□□□□□ -0.36
HSPG2-211ENST00000486901 HMGCS2P54868 508 aa12.8□□□□□ -0.36
HSPG2-211ENST00000486901 TGFB2P61812 414 aa12.8□□□□□ -0.36
HSPG2-211ENST00000486901 PDK3Q15120 406 aa12.8□□□□□ -0.36
HSPG2-211ENST00000486901 TRMT5Q32P41 509 aaKnown RBP12.8□□□□□ -0.36
HSPG2-211ENST00000486901 EEF1DP3Q658K8 133 aa12.8□□□□□ -0.36
HSPG2-211ENST00000486901 NXNQ6DKJ4 435 aa12.8□□□□□ -0.36
HSPG2-211ENST00000486901 SDCCAG8Q86SQ7 713 aaPredicted RBP12.8□□□□□ -0.36
HSPG2-211ENST00000486901 C7orf31Q8N865 590 aa12.8□□□□□ -0.36
HSPG2-211ENST00000486901 ZNF398Q8TD17 642 aa12.8□□□□□ -0.36
HSPG2-211ENST00000486901 FAM151AQ8WW52 585 aa12.8□□□□□ -0.36
HSPG2-211ENST00000486901 ERLEC1Q96DZ1 483 aa12.8□□□□□ -0.36
HSPG2-211ENST00000486901 APOL2Q9BQE5 337 aa12.8□□□□□ -0.36
HSPG2-211ENST00000486901 CENPKQ9BS16 269 aa12.8□□□□□ -0.36
HSPG2-211ENST00000486901 NTPCRQ9BSD7 190 aaKnown RBP12.8□□□□□ -0.36
HSPG2-211ENST00000486901 SDCBP2Q9H190 292 aa12.8□□□□□ -0.36
HSPG2-211ENST00000486901 KCNK4Q9NYG8 393 aa12.8□□□□□ -0.36
HSPG2-211ENST00000486901 HES2Q9Y543 173 aa12.8□□□□□ -0.36
HSPG2-211ENST00000486901 SIN3BO75182 1162 aa12.8□□□□□ -0.36
HSPG2-211ENST00000486901 KCNA2P16389 499 aa12.8□□□□□ -0.36
HSPG2-211ENST00000486901 SFNP31947 248 aa12.8□□□□□ -0.36
HSPG2-211ENST00000486901 SLC1A6P48664 564 aa12.8□□□□□ -0.36
HSPG2-211ENST00000486901 CDK7P50613 346 aa12.8□□□□□ -0.36
HSPG2-211ENST00000486901 TMED1Q13445 227 aa12.8□□□□□ -0.36
HSPG2-211ENST00000486901 KRT72Q14CN4 511 aa12.8□□□□□ -0.36
HSPG2-211ENST00000486901 CCDC142Q17RM4 750 aa12.8□□□□□ -0.36
HSPG2-211ENST00000486901 SPDYAQ5MJ70 313 aa12.8□□□□□ -0.36
HSPG2-211ENST00000486901 SPATA6LQ8N4H0 392 aa12.8□□□□□ -0.36
HSPG2-211ENST00000486901 NDRG1Q92597 394 aaKnown RBP12.8□□□□□ -0.36
HSPG2-211ENST00000486901 VCPIP1Q96JH7 1222 aa12.8□□□□□ -0.36
HSPG2-211ENST00000486901 PRPF18Q99633 342 aaKnown RBP12.8□□□□□ -0.36
HSPG2-211ENST00000486901 SEMA6AQ9H2E6 1030 aa12.8□□□□□ -0.36
HSPG2-211ENST00000486901 BRCA2P51587 3418 aa12.8□□□□□ -0.36
HSPG2-211ENST00000486901 APOC4-APOC2K7ER74 178 aa12.8□□□□□ -0.36
HSPG2-211ENST00000486901 BUD23O43709 281 aaKnown RBP12.8□□□□□ -0.36
HSPG2-211ENST00000486901 PRPSAP2O60256 369 aa12.8□□□□□ -0.36
HSPG2-211ENST00000486901 FOXD2O60548 495 aaPredicted RBP12.8□□□□□ -0.36
HSPG2-211ENST00000486901 LYPLA2O95372 231 aa12.8□□□□□ -0.36
HSPG2-211ENST00000486901 APOC2P02655 101 aa12.8□□□□□ -0.36
HSPG2-211ENST00000486901 ASNSP08243 561 aa12.8□□□□□ -0.36
HSPG2-211ENST00000486901 PMLP29590 882 aa12.8□□□□□ -0.36
HSPG2-211ENST00000486901 STIP1P31948 543 aaKnown RBP12.8□□□□□ -0.36
HSPG2-211ENST00000486901 TCF7P36402 384 aaPredicted RBP12.8□□□□□ -0.36
HSPG2-211ENST00000486901 COPAP53621 1224 aa12.8□□□□□ -0.36
HSPG2-211ENST00000486901 SLC18A1P54219 525 aa12.8□□□□□ -0.36
HSPG2-211ENST00000486901 SLC18A2Q05940 514 aa12.8□□□□□ -0.36
HSPG2-211ENST00000486901 TBL3Q12788 808 aaKnown RBP12.8□□□□□ -0.36
HSPG2-211ENST00000486901 DRICH1Q6PGQ1 229 aaPredicted RBP12.8□□□□□ -0.36
HSPG2-211ENST00000486901 DLK2Q6UY11 383 aa12.8□□□□□ -0.36
HSPG2-211ENST00000486901 NET1Q7Z628 596 aaPredicted RBP12.8□□□□□ -0.36
HSPG2-211ENST00000486901 WDR75Q8IWA0 830 aaKnown RBP12.8□□□□□ -0.36
HSPG2-211ENST00000486901 TUBB6Q9BUF5 446 aa12.8□□□□□ -0.36
HSPG2-211ENST00000486901 COPS7BQ9H9Q2 264 aaPredicted RBP12.8□□□□□ -0.36
HSPG2-211ENST00000486901 SLC38A10Q9HBR0 1119 aa12.8□□□□□ -0.36
HSPG2-211ENST00000486901 POPDC2Q9HBU9 364 aa12.8□□□□□ -0.36
HSPG2-211ENST00000486901 ZNF302Q9NR11 478 aa12.8□□□□□ -0.36
HSPG2-211ENST00000486901 LMCD1Q9NZU5 365 aa12.8□□□□□ -0.36
HSPG2-211ENST00000486901 TCRBV5S1A1TA0A578 114 aa12.79□□□□□ -0.36
HSPG2-211ENST00000486901 PFDN1O60925 122 aa12.79□□□□□ -0.36
HSPG2-211ENST00000486901 DNAJC6O75061 913 aa12.79□□□□□ -0.36
HSPG2-211ENST00000486901 ITGB3P05106 788 aa12.79□□□□□ -0.36
HSPG2-211ENST00000486901 BPGMP07738 259 aa12.79□□□□□ -0.36
HSPG2-211ENST00000486901 FOLH1Q04609 750 aa12.79□□□□□ -0.36
HSPG2-211ENST00000486901 NRF1Q16656 503 aa12.79□□□□□ -0.36
HSPG2-211ENST00000486901 SLC5A9Q2M3M2 681 aa12.79□□□□□ -0.36
HSPG2-211ENST00000486901 C6orf52Q5T4I8 152 aa12.79□□□□□ -0.36
HSPG2-211ENST00000486901 TMEM198Q66K66 360 aa12.79□□□□□ -0.36
HSPG2-211ENST00000486901 MAVSQ7Z434 540 aa12.79□□□□□ -0.36
HSPG2-211ENST00000486901 VSIG10LQ86VR7 867 aa12.79□□□□□ -0.36
HSPG2-211ENST00000486901 XYLT1Q86Y38 959 aa12.79□□□□□ -0.36
HSPG2-211ENST00000486901 GALNT8Q9NY28 637 aa12.79□□□□□ -0.36
HSPG2-211ENST00000486901 SIPA1L1O43166 1804 aa12.79□□□□□ -0.36
HSPG2-211ENST00000486901 BTAF1O14981 1849 aa12.79□□□□□ -0.36
HSPG2-211ENST00000486901 SLC15A5A6NIM6 579 aa12.79□□□□□ -0.36
HSPG2-211ENST00000486901 A8MXQ7 604 aa12.79□□□□□ -0.36
HSPG2-211ENST00000486901 HNRNPCL1O60812 293 aaKnown RBP12.79□□□□□ -0.36
HSPG2-211ENST00000486901 TRUB2O95900 331 aaKnown RBP12.79□□□□□ -0.36
HSPG2-211ENST00000486901 ENO3P13929 434 aaPredicted RBP12.79□□□□□ -0.36
HSPG2-211ENST00000486901 VAV1P15498 845 aa12.79□□□□□ -0.36
HSPG2-211ENST00000486901 CCND2P30279 289 aa12.79□□□□□ -0.36
HSPG2-211ENST00000486901 GLRBP48167 497 aa12.79□□□□□ -0.36
HSPG2-211ENST00000486901 NUDT2P50583 147 aa12.79□□□□□ -0.36
HSPG2-211ENST00000486901 DUOXA2Q1HG44 320 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms