RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 NME3Q13232 169 aa7.26□□□□□ -1.25
UBR4-214ENST00000486515 CAMK1Q14012 370 aa7.26□□□□□ -1.25
UBR4-214ENST00000486515 CDO1Q16878 200 aa7.26□□□□□ -1.25
UBR4-214ENST00000486515 ZNF569Q5MCW4 686 aa7.26□□□□□ -1.25
UBR4-214ENST00000486515 C10orf120Q5SQS8 335 aa7.26□□□□□ -1.25
UBR4-214ENST00000486515 RARS2Q5T160 578 aaKnown RBP7.26□□□□□ -1.25
UBR4-214ENST00000486515 HECTD3Q5T447 861 aa7.26□□□□□ -1.25
UBR4-214ENST00000486515 PM20D1Q6GTS8 502 aa7.26□□□□□ -1.25
UBR4-214ENST00000486515 SCYL2Q6P3W7 929 aa7.26□□□□□ -1.25
UBR4-214ENST00000486515 OLFML1Q6UWY5 402 aa7.26□□□□□ -1.25
UBR4-214ENST00000486515 TMC5Q6UXY8 1006 aa7.26□□□□□ -1.25
UBR4-214ENST00000486515 ZNF662Q6ZS27 426 aa7.26□□□□□ -1.25
UBR4-214ENST00000486515 BEND5Q7L4P6 421 aa7.26□□□□□ -1.25
UBR4-214ENST00000486515 ARCQ7LC44 396 aa7.26□□□□□ -1.25
UBR4-214ENST00000486515 PEX26Q7Z412 305 aa7.26□□□□□ -1.25
UBR4-214ENST00000486515 DDX42Q86XP3 938 aaKnown RBP eCLIP7.26□□□□□ -1.25
UBR4-214ENST00000486515 MAP7D3Q8IWC1 876 aa7.26□□□□□ -1.25
UBR4-214ENST00000486515 UNC45BQ8IWX7 931 aa7.26□□□□□ -1.25
UBR4-214ENST00000486515 DEFB106AQ8N104 65 aa7.26□□□□□ -1.25
UBR4-214ENST00000486515 FNIP1Q8TF40 1166 aa7.26□□□□□ -1.25
UBR4-214ENST00000486515 SLC22A17Q8WUG5 538 aa7.26□□□□□ -1.25
UBR4-214ENST00000486515 MYRFLQ96LU7 910 aa7.26□□□□□ -1.25
UBR4-214ENST00000486515 CNPY3Q9BT09 278 aa7.26□□□□□ -1.25
UBR4-214ENST00000486515 PACSIN1Q9BY11 444 aa7.26□□□□□ -1.25
UBR4-214ENST00000486515 CLIC5Q9NZA1 410 aa7.26□□□□□ -1.25
UBR4-214ENST00000486515 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.26□□□□□ -1.25
UBR4-214ENST00000486515 COX16Q9P0S2 106 aa7.26□□□□□ -1.25
UBR4-214ENST00000486515 GMIPQ9P107 970 aa7.26□□□□□ -1.25
UBR4-214ENST00000486515 CYTH4Q9UIA0 394 aa7.26□□□□□ -1.25
UBR4-214ENST00000486515 RASAL2Q9UJF2 1139 aa7.26□□□□□ -1.25
UBR4-214ENST00000486515 DNMT3LQ9UJW3 386 aa7.26□□□□□ -1.25
UBR4-214ENST00000486515 LSM7Q9UK45 103 aaKnown RBP7.26□□□□□ -1.25
UBR4-214ENST00000486515 USTQ9Y2C2 406 aa7.26□□□□□ -1.25
UBR4-214ENST00000486515 USP3Q9Y6I4 520 aa7.26□□□□□ -1.25
UBR4-214ENST00000486515 NCANO14594 1321 aa7.26□□□□□ -1.25
UBR4-214ENST00000486515 A0A1W2PRU2 124 aa7.25□□□□□ -1.25
UBR4-214ENST00000486515 TYW5A2RUC4 315 aaKnown RBP7.25□□□□□ -1.25
UBR4-214ENST00000486515 TMEM191CA6NGB0 347 aa7.25□□□□□ -1.25
UBR4-214ENST00000486515 YJEFN3A6XGL0 299 aa7.25□□□□□ -1.25
UBR4-214ENST00000486515 HHLA1C9JL84 531 aa7.25□□□□□ -1.25
UBR4-214ENST00000486515 E7ENQ6 273 aa7.25□□□□□ -1.25
UBR4-214ENST00000486515 H3BQ06 376 aaPredicted RBP7.25□□□□□ -1.25
UBR4-214ENST00000486515 M0QYT0 321 aa7.25□□□□□ -1.25
UBR4-214ENST00000486515 TNFRSF10BO14763 440 aa7.25□□□□□ -1.25
UBR4-214ENST00000486515 ZNF263O14978 683 aa7.25□□□□□ -1.25
UBR4-214ENST00000486515 TLR5O60602 858 aa7.25□□□□□ -1.25
UBR4-214ENST00000486515 RFPL2O75678 378 aa7.25□□□□□ -1.25
UBR4-214ENST00000486515 MOCS3O95396 460 aa7.25□□□□□ -1.25
UBR4-214ENST00000486515 CKMP06732 381 aa7.25□□□□□ -1.25
UBR4-214ENST00000486515 RHOP08100 348 aa7.25□□□□□ -1.25
UBR4-214ENST00000486515 KRT7P08729 469 aa7.25□□□□□ -1.25
UBR4-214ENST00000486515 POU2F2P09086 479 aa7.25□□□□□ -1.25
UBR4-214ENST00000486515 MBL2P11226 248 aaPredicted RBP7.25□□□□□ -1.25
UBR4-214ENST00000486515 TNNT1P13805 278 aa7.25□□□□□ -1.25
UBR4-214ENST00000486515 PFKLP17858 780 aa7.25□□□□□ -1.25
UBR4-214ENST00000486515 HDCP19113 662 aa7.25□□□□□ -1.25
UBR4-214ENST00000486515 FSHRP23945 695 aa7.25□□□□□ -1.25
UBR4-214ENST00000486515 CASQ1P31415 396 aa7.25□□□□□ -1.25
UBR4-214ENST00000486515 CCR1P32246 355 aa7.25□□□□□ -1.25
UBR4-214ENST00000486515 RDXP35241 583 aaKnown RBP7.25□□□□□ -1.25
UBR4-214ENST00000486515 RFC1P35251 1148 aaPredicted RBP7.25□□□□□ -1.25
UBR4-214ENST00000486515 MTHFRP42898 656 aa7.25□□□□□ -1.25
UBR4-214ENST00000486515 RPL34P49207 117 aaKnown RBP7.25□□□□□ -1.25
UBR4-214ENST00000486515 HARS2P49590 506 aaKnown RBP7.25□□□□□ -1.25
UBR4-214ENST00000486515 TUBP50607 506 aa7.25□□□□□ -1.25
UBR4-214ENST00000486515 ATP11AP98196 1134 aa7.25□□□□□ -1.25
UBR4-214ENST00000486515 HYAL1Q12794 435 aa7.25□□□□□ -1.25
UBR4-214ENST00000486515 EFEMP1Q12805 493 aa7.25□□□□□ -1.25
UBR4-214ENST00000486515 MTMR3Q13615 1198 aa7.25□□□□□ -1.25
UBR4-214ENST00000486515 RSPO4Q2I0M5 234 aaPredicted RBP7.25□□□□□ -1.25
UBR4-214ENST00000486515 SLC25A52Q3SY17 297 aa7.25□□□□□ -1.25
UBR4-214ENST00000486515 ACBD5Q5T8D3 534 aaPredicted RBP7.25□□□□□ -1.25
UBR4-214ENST00000486515 ANKRD54Q6NXT1 300 aa7.25□□□□□ -1.25
UBR4-214ENST00000486515 STRADAQ7RTN6 431 aa7.25□□□□□ -1.25
UBR4-214ENST00000486515 GPRIN1Q7Z2K8 1008 aa7.25□□□□□ -1.25
UBR4-214ENST00000486515 GRASPQ7Z6J2 395 aaPredicted RBP7.25□□□□□ -1.25
UBR4-214ENST00000486515 DNAAF5Q86Y56 855 aa7.25□□□□□ -1.25
UBR4-214ENST00000486515 MIB1Q86YT6 1006 aa7.25□□□□□ -1.25
UBR4-214ENST00000486515 CCDC117Q8IWD4 279 aaPredicted RBP7.25□□□□□ -1.25
UBR4-214ENST00000486515 RHOT1Q8IXI2 618 aa7.25□□□□□ -1.25
UBR4-214ENST00000486515 ATP6V0D2Q8N8Y2 350 aa7.25□□□□□ -1.25
UBR4-214ENST00000486515 TTC16Q8NEE8 873 aa7.25□□□□□ -1.25
UBR4-214ENST00000486515 CMASQ8NFW8 434 aaPredicted RBP7.25□□□□□ -1.25
UBR4-214ENST00000486515 CLEC4CQ8WTT0 213 aa7.25□□□□□ -1.25
UBR4-214ENST00000486515 FAM172AQ8WUF8 416 aa7.25□□□□□ -1.25
UBR4-214ENST00000486515 RXFP2Q8WXD0 754 aa7.25□□□□□ -1.25
UBR4-214ENST00000486515 EDEM1Q92611 657 aa7.25□□□□□ -1.25
UBR4-214ENST00000486515 ARHGEF26Q96DR7 871 aa7.25□□□□□ -1.25
UBR4-214ENST00000486515 PABPC5Q96DU9 382 aaKnown RBP7.25□□□□□ -1.25
UBR4-214ENST00000486515 CFAP57Q96MR6 1250 aa7.25□□□□□ -1.25
UBR4-214ENST00000486515 NECTIN4Q96NY8 510 aa7.25□□□□□ -1.25
UBR4-214ENST00000486515 DDX50Q9BQ39 737 aaKnown RBP7.25□□□□□ -1.25
UBR4-214ENST00000486515 TTLL2Q9BWV7 592 aa7.25□□□□□ -1.25
UBR4-214ENST00000486515 CRISPLD1Q9H336 500 aa7.25□□□□□ -1.25
UBR4-214ENST00000486515 WDCPQ9H6R7 721 aa7.25□□□□□ -1.25
UBR4-214ENST00000486515 OSGEPQ9NPF4 335 aa7.25□□□□□ -1.25
UBR4-214ENST00000486515 DDIT4Q9NX09 232 aa7.25□□□□□ -1.25
UBR4-214ENST00000486515 MARCH2Q9P0N8 246 aa7.25□□□□□ -1.25
UBR4-214ENST00000486515 PYCARDQ9ULZ3 195 aa7.25□□□□□ -1.25
UBR4-214ENST00000486515 SH3BP1Q9Y3L3 701 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms