RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 URGCPQ8TCY9 931 aa12.41□□□□□ -0.42
PKP4-213ENST00000486254 BCAS4Q8TDM0 211 aa12.41□□□□□ -0.42
PKP4-213ENST00000486254 MYLPFQ96A32 169 aa12.41□□□□□ -0.42
PKP4-213ENST00000486254 FERMT1Q9BQL6 677 aa12.41□□□□□ -0.42
PKP4-213ENST00000486254 OSBPL7Q9BZF2 842 aa12.41□□□□□ -0.42
PKP4-213ENST00000486254 ULBP1Q9BZM6 244 aa12.41□□□□□ -0.42
PKP4-213ENST00000486254 KLC2Q9H0B6 622 aa12.41□□□□□ -0.42
PKP4-213ENST00000486254 BRD8Q9H0E9 1235 aa12.41□□□□□ -0.42
PKP4-213ENST00000486254 LRRC4CQ9HCJ2 640 aa12.41□□□□□ -0.42
PKP4-213ENST00000486254 STARD7Q9NQZ5 370 aa12.41□□□□□ -0.42
PKP4-213ENST00000486254 GPATCH2LQ9NWQ4 482 aa12.41□□□□□ -0.42
PKP4-213ENST00000486254 TLDC2A0PJX2 215 aa12.4□□□□□ -0.42
PKP4-213ENST00000486254 SYN3O14994 580 aa12.4□□□□□ -0.42
PKP4-213ENST00000486254 NCAM2O15394 837 aa12.4□□□□□ -0.42
PKP4-213ENST00000486254 DGKIO75912 1065 aa12.4□□□□□ -0.42
PKP4-213ENST00000486254 TMEM63AO94886 807 aa12.4□□□□□ -0.42
PKP4-213ENST00000486254 OAZ2O95190 189 aa12.4□□□□□ -0.42
PKP4-213ENST00000486254 FYNP06241 537 aa12.4□□□□□ -0.42
PKP4-213ENST00000486254 GSTA2P09210 222 aa12.4□□□□□ -0.42
PKP4-213ENST00000486254 ATP2A2P16615 1042 aaKnown RBP12.4□□□□□ -0.42
PKP4-213ENST00000486254 TPSB2P20231 275 aa12.4□□□□□ -0.42
PKP4-213ENST00000486254 APLP1P51693 650 aa12.4□□□□□ -0.42
PKP4-213ENST00000486254 PDIA2Q13087 525 aaKnown RBP12.4□□□□□ -0.42
PKP4-213ENST00000486254 DPYSQ14117 519 aa12.4□□□□□ -0.42
PKP4-213ENST00000486254 MBTPS1Q14703 1052 aa12.4□□□□□ -0.42
PKP4-213ENST00000486254 PAFAH1B3Q15102 231 aaKnown RBP12.4□□□□□ -0.42
PKP4-213ENST00000486254 TPSAB1Q15661 275 aa12.4□□□□□ -0.42
PKP4-213ENST00000486254 LONRF1Q17RB8 773 aa12.4□□□□□ -0.42
PKP4-213ENST00000486254 KLHL38Q2WGJ6 581 aa12.4□□□□□ -0.42
PKP4-213ENST00000486254 CCDC38Q502W7 563 aa12.4□□□□□ -0.42
PKP4-213ENST00000486254 PPP6R3Q5H9R7 873 aaPredicted RBP12.4□□□□□ -0.42
PKP4-213ENST00000486254 NCBP2-AS2Q69YL0 99 aa12.4□□□□□ -0.42
PKP4-213ENST00000486254 NPNTQ6UXI9 565 aa12.4□□□□□ -0.42
PKP4-213ENST00000486254 BHLHA9Q7RTU4 235 aa12.4□□□□□ -0.42
PKP4-213ENST00000486254 PRUNE1Q86TP1 453 aa12.4□□□□□ -0.42
PKP4-213ENST00000486254 RNF139Q8WU17 664 aa12.4□□□□□ -0.42
PKP4-213ENST00000486254 ARHGEF2Q92974 986 aaKnown RBP12.4□□□□□ -0.42
PKP4-213ENST00000486254 FUBP3Q96I24 572 aaKnown RBP eCLIP12.4□□□□□ -0.42
PKP4-213ENST00000486254 C9orf72Q96LT7 481 aa12.4□□□□□ -0.42
PKP4-213ENST00000486254 PAAF1Q9BRP4 392 aa12.4□□□□□ -0.42
PKP4-213ENST00000486254 ACSS3Q9H6R3 686 aa12.4□□□□□ -0.42
PKP4-213ENST00000486254 WDR6Q9NNW5 1121 aaKnown RBP12.4□□□□□ -0.42
PKP4-213ENST00000486254 ARHGEF4Q9NR80 690 aa12.4□□□□□ -0.42
PKP4-213ENST00000486254 TMEM161AQ9NX61 479 aa12.4□□□□□ -0.42
PKP4-213ENST00000486254 CLUHO75153 1309 aa12.4□□□□□ -0.42
PKP4-213ENST00000486254 EXOC1LA0A1B0GW35 172 aa12.39□□□□□ -0.43
PKP4-213ENST00000486254 GMNCA6NCL1 334 aa12.39□□□□□ -0.43
PKP4-213ENST00000486254 M0QYT0 321 aa12.39□□□□□ -0.43
PKP4-213ENST00000486254 PITPNM1O00562 1244 aa12.39□□□□□ -0.43
PKP4-213ENST00000486254 FKTNO75072 461 aa12.39□□□□□ -0.43
PKP4-213ENST00000486254 TRPA1O75762 1119 aa12.39□□□□□ -0.43
PKP4-213ENST00000486254 POMCP01189 267 aa12.39□□□□□ -0.43
PKP4-213ENST00000486254 SELPP16109 830 aa12.39□□□□□ -0.43
PKP4-213ENST00000486254 GRK4P32298 578 aa12.39□□□□□ -0.43
PKP4-213ENST00000486254 ADRA1BP35368 520 aa12.39□□□□□ -0.43
PKP4-213ENST00000486254 MAGEA3P43357 314 aa12.39□□□□□ -0.43
PKP4-213ENST00000486254 GLUD2P49448 558 aa12.39□□□□□ -0.43
PKP4-213ENST00000486254 CDK7P50613 346 aa12.39□□□□□ -0.43
PKP4-213ENST00000486254 HNRNPH2P55795 449 aaKnown RBP12.39□□□□□ -0.43
PKP4-213ENST00000486254 IFI35P80217 286 aaPredicted RBP12.39□□□□□ -0.43
PKP4-213ENST00000486254 DEUP1Q05D60 604 aa12.39□□□□□ -0.43
PKP4-213ENST00000486254 BFSP2Q13515 415 aa12.39□□□□□ -0.43
PKP4-213ENST00000486254 ARL13BQ3SXY8 428 aa12.39□□□□□ -0.43
PKP4-213ENST00000486254 NOMO2Q5JPE7 1267 aa12.39□□□□□ -0.43
PKP4-213ENST00000486254 PDZD4Q76G19 769 aaPredicted RBP12.39□□□□□ -0.43
PKP4-213ENST00000486254 B4GALNT4Q76KP1 1039 aa12.39□□□□□ -0.43
PKP4-213ENST00000486254 EXOC3L1Q86VI1 746 aa12.39□□□□□ -0.43
PKP4-213ENST00000486254 ZC3H18Q86VM9 953 aaKnown RBP12.39□□□□□ -0.43
PKP4-213ENST00000486254 ZBED8Q8IZ13 594 aa12.39□□□□□ -0.43
PKP4-213ENST00000486254 PYROXD1Q8WU10 500 aa12.39□□□□□ -0.43
PKP4-213ENST00000486254 ATXN2LQ8WWM7 1075 aaKnown RBP12.39□□□□□ -0.43
PKP4-213ENST00000486254 MAML1Q92585 1016 aa12.39□□□□□ -0.43
PKP4-213ENST00000486254 APBB2Q92870 758 aa12.39□□□□□ -0.43
PKP4-213ENST00000486254 XPO6Q96QU8 1125 aaKnown RBP12.39□□□□□ -0.43
PKP4-213ENST00000486254 DHRS4Q9BTZ2 278 aa12.39□□□□□ -0.43
PKP4-213ENST00000486254 FAM107BQ9H098 131 aa12.39□□□□□ -0.43
PKP4-213ENST00000486254 SSU72Q9NP77 194 aaKnown RBP12.39□□□□□ -0.43
PKP4-213ENST00000486254 EIF2B3Q9NR50 452 aaKnown RBP12.39□□□□□ -0.43
PKP4-213ENST00000486254 DTLQ9NZJ0 730 aa12.39□□□□□ -0.43
PKP4-213ENST00000486254 XPO7Q9UIA9 1087 aaKnown RBP12.39□□□□□ -0.43
PKP4-213ENST00000486254 FBXW11Q9UKB1 542 aa12.39□□□□□ -0.43
PKP4-213ENST00000486254 YJEFN3A6XGL0 299 aa12.39□□□□□ -0.43
PKP4-213ENST00000486254 KBTBD13C9JR72 458 aa12.39□□□□□ -0.43
PKP4-213ENST00000486254 E7ENQ6 273 aa12.39□□□□□ -0.43
PKP4-213ENST00000486254 DNM1LO00429 736 aa12.39□□□□□ -0.43
PKP4-213ENST00000486254 NDUFAB1O14561 156 aa12.39□□□□□ -0.43
PKP4-213ENST00000486254 NRP1O14786 923 aa12.39□□□□□ -0.43
PKP4-213ENST00000486254 CAPN9O14815 690 aa12.39□□□□□ -0.43
PKP4-213ENST00000486254 KCNN4O15554 427 aa12.39□□□□□ -0.43
PKP4-213ENST00000486254 OPHN1O60890 802 aa12.39□□□□□ -0.43
PKP4-213ENST00000486254 PARNO95453 639 aaKnown RBP12.39□□□□□ -0.43
PKP4-213ENST00000486254 IGLV3-25P01717 112 aa12.39□□□□□ -0.43
PKP4-213ENST00000486254 IGFBP6P24592 240 aaPredicted RBP12.39□□□□□ -0.43
PKP4-213ENST00000486254 FDFT1P37268 417 aa12.39□□□□□ -0.43
PKP4-213ENST00000486254 CXCR3P49682 368 aa12.39□□□□□ -0.43
PKP4-213ENST00000486254 PLXNA3P51805 1871 aa12.39□□□□□ -0.43
PKP4-213ENST00000486254 BASP1P80723 227 aaKnown RBP12.39□□□□□ -0.43
PKP4-213ENST00000486254 YWHAHQ04917 246 aaPredicted RBP12.39□□□□□ -0.43
PKP4-213ENST00000486254 ZNF33AQ06730 810 aa12.39□□□□□ -0.43
PKP4-213ENST00000486254 SEMA5AQ13591 1074 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms