RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 SLC2A13Q96QE2 648 aa11.89□□□□□ -0.51
NUP50-216ENST00000486184 SMOC2Q9H3U7 446 aa11.89□□□□□ -0.51
NUP50-216ENST00000486184 KCNK12Q9HB15 430 aa11.89□□□□□ -0.51
NUP50-216ENST00000486184 CFAP97Q9P2B7 532 aa11.89□□□□□ -0.51
NUP50-216ENST00000486184 SFMBT1Q9UHJ3 866 aa11.89□□□□□ -0.51
NUP50-216ENST00000486184 CCL26Q9Y258 94 aa11.89□□□□□ -0.51
NUP50-216ENST00000486184 SYNJ2BP-COX16A0A087WUM0 186 aa11.88□□□□□ -0.51
NUP50-216ENST00000486184 SOWAHDA6NJG2 315 aa11.88□□□□□ -0.51
NUP50-216ENST00000486184 SIGLEC16A6NMB1 481 aa11.88□□□□□ -0.51
NUP50-216ENST00000486184 ANHXE9PGG2 379 aa11.88□□□□□ -0.51
NUP50-216ENST00000486184 TRUB2O95900 331 aaKnown RBP11.88□□□□□ -0.51
NUP50-216ENST00000486184 ASGR2P07307 311 aa11.88□□□□□ -0.51
NUP50-216ENST00000486184 H2AFZP0C0S5 128 aa11.88□□□□□ -0.51
NUP50-216ENST00000486184 FCARP24071 287 aa11.88□□□□□ -0.51
NUP50-216ENST00000486184 SDC4P31431 198 aa11.88□□□□□ -0.51
NUP50-216ENST00000486184 GPC5P78333 572 aa11.88□□□□□ -0.51
NUP50-216ENST00000486184 USP4Q13107 963 aa11.88□□□□□ -0.51
NUP50-216ENST00000486184 GRM2Q14416 872 aa11.88□□□□□ -0.51
NUP50-216ENST00000486184 MTF1Q14872 753 aa11.88□□□□□ -0.51
NUP50-216ENST00000486184 ASTE1Q2TB18 679 aaPredicted RBP11.88□□□□□ -0.51
NUP50-216ENST00000486184 ARHGAP29Q52LW3 1261 aa11.88□□□□□ -0.51
NUP50-216ENST00000486184 SYPL2Q5VXT5 272 aa11.88□□□□□ -0.51
NUP50-216ENST00000486184 H2AFVQ71UI9 128 aa11.88□□□□□ -0.51
NUP50-216ENST00000486184 ARCQ7LC44 396 aa11.88□□□□□ -0.51
NUP50-216ENST00000486184 DNAAF5Q86Y56 855 aa11.88□□□□□ -0.51
NUP50-216ENST00000486184 MFSD6LQ8IWD5 586 aa11.88□□□□□ -0.51
NUP50-216ENST00000486184 ADAM32Q8TC27 787 aa11.88□□□□□ -0.51
NUP50-216ENST00000486184 DQX1Q8TE96 717 aaKnown RBP11.88□□□□□ -0.51
NUP50-216ENST00000486184 RSAD2Q8WXG1 361 aa11.88□□□□□ -0.51
NUP50-216ENST00000486184 PLD4Q96BZ4 506 aa11.88□□□□□ -0.51
NUP50-216ENST00000486184 MCEEQ96PE7 176 aa11.88□□□□□ -0.51
NUP50-216ENST00000486184 UHRF1Q96T88 793 aaPredicted RBP11.88□□□□□ -0.51
NUP50-216ENST00000486184 TRMT61BQ9BVS5 477 aaKnown RBP11.88□□□□□ -0.51
NUP50-216ENST00000486184 KLF16Q9BXK1 252 aaPredicted RBP11.88□□□□□ -0.51
NUP50-216ENST00000486184 DCLK3Q9C098 648 aa11.88□□□□□ -0.51
NUP50-216ENST00000486184 THAP2Q9H0W7 228 aa11.88□□□□□ -0.51
NUP50-216ENST00000486184 COX16Q9P0S2 106 aa11.88□□□□□ -0.51
NUP50-216ENST00000486184 HBS1LQ9Y450 684 aaKnown RBP11.88□□□□□ -0.51
NUP50-216ENST00000486184 PAXBP1Q9Y5B6 917 aa11.88□□□□□ -0.51
NUP50-216ENST00000486184 EYSQ5T1H1 3165 aa11.87□□□□□ -0.51
NUP50-216ENST00000486184 E2F8A0AVK6 867 aa11.87□□□□□ -0.51
NUP50-216ENST00000486184 EIF3CLB5ME19 914 aaKnown RBP11.87□□□□□ -0.51
NUP50-216ENST00000486184 M0QYT0 321 aa11.87□□□□□ -0.51
NUP50-216ENST00000486184 SLC9A3R1O14745 358 aaPredicted RBP11.87□□□□□ -0.51
NUP50-216ENST00000486184 ZNF263O14978 683 aa11.87□□□□□ -0.51
NUP50-216ENST00000486184 MSI1O43347 362 aaKnown RBP11.87□□□□□ -0.51
NUP50-216ENST00000486184 F9P00740 461 aa11.87□□□□□ -0.51
NUP50-216ENST00000486184 APOEP02649 317 aa11.87□□□□□ -0.51
NUP50-216ENST00000486184 FYNP06241 537 aa11.87□□□□□ -0.51
NUP50-216ENST00000486184 SLC2A3P11169 496 aa11.87□□□□□ -0.51
NUP50-216ENST00000486184 TCF3P15923 654 aa11.87□□□□□ -0.51
NUP50-216ENST00000486184 PDGFRAP16234 1089 aa11.87□□□□□ -0.51
NUP50-216ENST00000486184 GPD1P21695 349 aa11.87□□□□□ -0.51
NUP50-216ENST00000486184 FECHP22830 423 aa11.87□□□□□ -0.51
NUP50-216ENST00000486184 GDI1P31150 447 aa11.87□□□□□ -0.51
NUP50-216ENST00000486184 FLT3P36888 993 aa11.87□□□□□ -0.51
NUP50-216ENST00000486184 IFNAR2P48551 515 aa11.87□□□□□ -0.51
NUP50-216ENST00000486184 HARS2P49590 506 aaKnown RBP11.87□□□□□ -0.51
NUP50-216ENST00000486184 GALCP54803 685 aa11.87□□□□□ -0.51
NUP50-216ENST00000486184 TBX4P57082 545 aa11.87□□□□□ -0.51
NUP50-216ENST00000486184 NME3Q13232 169 aa11.87□□□□□ -0.51
NUP50-216ENST00000486184 NNTQ13423 1086 aa11.87□□□□□ -0.51
NUP50-216ENST00000486184 TDGQ13569 410 aa11.87□□□□□ -0.51
NUP50-216ENST00000486184 TRIP4Q15650 581 aaPredicted RBP11.87□□□□□ -0.51
NUP50-216ENST00000486184 ZNF77Q15935 545 aa11.87□□□□□ -0.51
NUP50-216ENST00000486184 NUGGCQ68CJ6 796 aa11.87□□□□□ -0.51
NUP50-216ENST00000486184 VITQ6UXI7 678 aa11.87□□□□□ -0.51
NUP50-216ENST00000486184 TAC4Q86UU9 113 aa11.87□□□□□ -0.51
NUP50-216ENST00000486184 RNF135Q8IUD6 432 aa11.87□□□□□ -0.51
NUP50-216ENST00000486184 UNC45BQ8IWX7 931 aa11.87□□□□□ -0.51
NUP50-216ENST00000486184 TXLNBQ8N3L3 684 aa11.87□□□□□ -0.51
NUP50-216ENST00000486184 EMC1Q8N766 993 aa11.87□□□□□ -0.51
NUP50-216ENST00000486184 EIF3CQ99613 913 aaKnown RBP11.87□□□□□ -0.51
NUP50-216ENST00000486184 BRD9Q9H8M2 597 aa11.87□□□□□ -0.51
NUP50-216ENST00000486184 GKN1Q9NS71 199 aa11.87□□□□□ -0.51
NUP50-216ENST00000486184 TMEM51Q9NW97 253 aa11.87□□□□□ -0.51
NUP50-216ENST00000486184 DDIT4Q9NX09 232 aa11.87□□□□□ -0.51
NUP50-216ENST00000486184 CTTNBP2NLQ9P2B4 639 aa11.87□□□□□ -0.51
NUP50-216ENST00000486184 TBC1D14Q9P2M4 693 aa11.87□□□□□ -0.51
NUP50-216ENST00000486184 SLC12A6Q9UHW9 1150 aa11.87□□□□□ -0.51
NUP50-216ENST00000486184 TMEM59LQ9UK28 342 aa11.87□□□□□ -0.51
NUP50-216ENST00000486184 SORCS3Q9UPU3 1222 aa11.87□□□□□ -0.51
NUP50-216ENST00000486184 TLR6Q9Y2C9 796 aa11.87□□□□□ -0.51
NUP50-216ENST00000486184 ZNF510Q9Y2H8 683 aa11.87□□□□□ -0.51
NUP50-216ENST00000486184 MIA3Q5JRA6 1907 aa11.86□□□□□ -0.51
NUP50-216ENST00000486184 IRAK2O43187 625 aa11.86□□□□□ -0.51
NUP50-216ENST00000486184 STC2O76061 302 aa11.86□□□□□ -0.51
NUP50-216ENST00000486184 NDUFA10O95299 355 aa11.86□□□□□ -0.51
NUP50-216ENST00000486184 GJB6O95452 261 aa11.86□□□□□ -0.51
NUP50-216ENST00000486184 TMEM253P0C7T8 217 aa11.86□□□□□ -0.51
NUP50-216ENST00000486184 CORO1AP31146 461 aaKnown RBP11.86□□□□□ -0.51
NUP50-216ENST00000486184 RFC1P35251 1148 aaPredicted RBP11.86□□□□□ -0.51
NUP50-216ENST00000486184 MAGEA1P43355 309 aa11.86□□□□□ -0.51
NUP50-216ENST00000486184 KRT83P78385 493 aa11.86□□□□□ -0.51
NUP50-216ENST00000486184 ATP11AP98196 1134 aa11.86□□□□□ -0.51
NUP50-216ENST00000486184 DEUP1Q05D60 604 aa11.86□□□□□ -0.51
NUP50-216ENST00000486184 MAMLD1Q13495 774 aa11.86□□□□□ -0.51
NUP50-216ENST00000486184 PDGFRLQ15198 375 aa11.86□□□□□ -0.51
NUP50-216ENST00000486184 CDO1Q16878 200 aa11.86□□□□□ -0.51
NUP50-216ENST00000486184 SLC25A52Q3SY17 297 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms